Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.55□□□□□ -2
TRIM4Q9C037 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.55□□□□□ -2
TRIM4Q9C037 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
TRIM4Q9C037 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.55□□□□□ -2
TRIM4Q9C037 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
TRIM4Q9C037 AC080128.1-201ENST00000474389 1917 ntBASIC2.54□□□□□ -2
TRIM4Q9C037 MTND5P28-201ENST00000438005 1594 ntBASIC2.54□□□□□ -2
TRIM4Q9C037 MTND4P8-201ENST00000514997 1362 ntBASIC2.54□□□□□ -2
TRIM4Q9C037 RNA5SP289-201ENST00000362332 137 ntBASIC2.54□□□□□ -2
TRIM4Q9C037 SNORA67.4-201ENST00000384688 142 ntBASIC2.54□□□□□ -2
TRIM4Q9C037 RNU6-837P-201ENST00000391056 108 ntBASIC2.54□□□□□ -2
TRIM4Q9C037 RNU4-74P-201ENST00000411280 161 ntBASIC2.54□□□□□ -2
TRIM4Q9C037 AC107081.1-201ENST00000414975 361 ntBASIC2.54□□□□□ -2
TRIM4Q9C037 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.54□□□□□ -2
TRIM4Q9C037 MORF4L1P7-201ENST00000426038 703 ntBASIC2.54□□□□□ -2
TRIM4Q9C037 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.54□□□□□ -2
TRIM4Q9C037 snoU13.4-201ENST00000458916 104 ntBASIC2.54□□□□□ -2
TRIM4Q9C037 MRPL42P6-201ENST00000486397 371 ntBASIC2.54□□□□□ -2
TRIM4Q9C037 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC2.54□□□□□ -2
TRIM4Q9C037 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.54□□□□□ -2
TRIM4Q9C037 OR5H5P-201ENST00000503164 928 ntBASIC2.54□□□□□ -2
TRIM4Q9C037 AC092436.1-201ENST00000506450 503 ntBASIC2.54□□□□□ -2
TRIM4Q9C037 HMGB3P3-201ENST00000510526 400 ntBASIC2.54□□□□□ -2
TRIM4Q9C037 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.54□□□□□ -2
TRIM4Q9C037 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.54□□□□□ -2
TRIM4Q9C037 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.54□□□□□ -2
TRIM4Q9C037 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.54□□□□□ -2
TRIM4Q9C037 MTCYBP28-201ENST00000566728 1132 ntBASIC2.54□□□□□ -2
TRIM4Q9C037 MIR4504-201ENST00000577413 92 ntBASIC2.54□□□□□ -2
TRIM4Q9C037 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.54□□□□□ -2
TRIM4Q9C037 COX6CP3-201ENST00000580869 223 ntBASIC2.54□□□□□ -2
TRIM4Q9C037 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.54□□□□□ -2
TRIM4Q9C037 AL512643.1-201ENST00000635735 524 ntBASIC2.54□□□□□ -2
TRIM4Q9C037 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.54□□□□□ -2
TRIM4Q9C037 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.53□□□□□ -2
TRIM4Q9C037 AC005336.3-201ENST00000623833 2679 ntBASIC2.53□□□□□ -2
TRIM4Q9C037 Y_RNA.118-201ENST00000363300 101 ntBASIC2.53□□□□□ -2
TRIM4Q9C037 RNU6-374P-201ENST00000364146 108 ntBASIC2.53□□□□□ -2
TRIM4Q9C037 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
TRIM4Q9C037 AL139039.1-201ENST00000401900 692 ntBASIC2.53□□□□□ -2
TRIM4Q9C037 AL356057.3-201ENST00000402607 340 ntBASIC2.53□□□□□ -2
TRIM4Q9C037 RN7SKP192-201ENST00000411291 327 ntBASIC2.53□□□□□ -2
TRIM4Q9C037 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.53□□□□□ -2
TRIM4Q9C037 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC2.53□□□□□ -2
TRIM4Q9C037 AC009963.1-201ENST00000417265 157 ntBASIC2.53□□□□□ -2
TRIM4Q9C037 USP9YP27-201ENST00000418455 438 ntBASIC2.53□□□□□ -2
TRIM4Q9C037 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.53□□□□□ -2
TRIM4Q9C037 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.53□□□□□ -2
TRIM4Q9C037 RPS12P2-201ENST00000439728 269 ntBASIC2.53□□□□□ -2
TRIM4Q9C037 CACYBPP2-201ENST00000453625 678 ntBASIC2.53□□□□□ -2
TRIM4Q9C037 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC2.53□□□□□ -2
TRIM4Q9C037 RPL7P20-201ENST00000520308 745 ntBASIC2.53□□□□□ -2
TRIM4Q9C037 AP003102.1-201ENST00000525638 661 ntBASIC2.53□□□□□ -2
TRIM4Q9C037 AP003122.3-201ENST00000526316 255 ntBASIC2.53□□□□□ -2
TRIM4Q9C037 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.53□□□□□ -2
TRIM4Q9C037 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.53□□□□□ -2
TRIM4Q9C037 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.53□□□□□ -2
TRIM4Q9C037 MIR5694-201ENST00000581190 76 ntBASIC2.53□□□□□ -2
TRIM4Q9C037 BNIP3P8-201ENST00000597863 560 ntBASIC2.53□□□□□ -2
TRIM4Q9C037 AC092474.3-201ENST00000603022 568 ntBASIC2.53□□□□□ -2
TRIM4Q9C037 AC025034.2-201ENST00000623264 286 ntBASIC2.53□□□□□ -2
TRIM4Q9C037 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.53□□□□□ -2
TRIM4Q9C037 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC2.53□□□□□ -2
TRIM4Q9C037 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.53□□□□□ -2
TRIM4Q9C037 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
TRIM4Q9C037 AC012321.1-201ENST00000561622 1588 ntBASIC2.53□□□□□ -2.01
TRIM4Q9C037 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.52□□□□□ -2.01
TRIM4Q9C037 RNA5SP139-201ENST00000364340 117 ntBASIC2.52□□□□□ -2.01
TRIM4Q9C037 U8.8-201ENST00000365399 135 ntBASIC2.52□□□□□ -2.01
TRIM4Q9C037 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
TRIM4Q9C037 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
TRIM4Q9C037 TAS2R15P-201ENST00000390674 928 ntBASIC2.52□□□□□ -2.01
TRIM4Q9C037 ATF1P1-201ENST00000406040 927 ntBASIC2.52□□□□□ -2.01
TRIM4Q9C037 U3.37-201ENST00000408528 213 ntBASIC2.52□□□□□ -2.01
TRIM4Q9C037 RNA5SP21-201ENST00000410917 96 ntBASIC2.52□□□□□ -2.01
TRIM4Q9C037 RNU4-78P-201ENST00000410940 126 ntBASIC2.52□□□□□ -2.01
TRIM4Q9C037 RNU6-564P-201ENST00000410983 104 ntBASIC2.52□□□□□ -2.01
TRIM4Q9C037 UBE2V1P6-201ENST00000430840 422 ntBASIC2.52□□□□□ -2.01
TRIM4Q9C037 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.52□□□□□ -2.01
TRIM4Q9C037 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC2.52□□□□□ -2.01
TRIM4Q9C037 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
TRIM4Q9C037 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.52□□□□□ -2.01
TRIM4Q9C037 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC2.52□□□□□ -2.01
TRIM4Q9C037 AC105914.1-201ENST00000511798 226 ntBASIC2.52□□□□□ -2.01
TRIM4Q9C037 AC133963.2-201ENST00000513686 578 ntBASIC2.52□□□□□ -2.01
TRIM4Q9C037 UBTFL10-201ENST00000528532 562 ntBASIC2.52□□□□□ -2.01
TRIM4Q9C037 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.52□□□□□ -2.01
TRIM4Q9C037 AC123904.3-201ENST00000547218 814 ntBASIC2.52□□□□□ -2.01
TRIM4Q9C037 SERPINE4P-201ENST00000554978 281 ntBASIC2.52□□□□□ -2.01
TRIM4Q9C037 ISCA1P3-201ENST00000577104 373 ntBASIC2.52□□□□□ -2.01
TRIM4Q9C037 AC009977.1-201ENST00000586015 570 ntBASIC2.52□□□□□ -2.01
TRIM4Q9C037 AL353997.5-201ENST00000618886 171 ntBASIC2.52□□□□□ -2.01
TRIM4Q9C037 AC018755.4-201ENST00000619715 454 ntBASIC2.52□□□□□ -2.01
TRIM4Q9C037 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.52□□□□□ -2.01
TRIM4Q9C037 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
TRIM4Q9C037 ZNF72P-201ENST00000425869 1908 ntBASIC2.52□□□□□ -2.01
TRIM4Q9C037 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
TRIM4Q9C037 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
TRIM4Q9C037 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.51□□□□□ -2.01
TRIM4Q9C037 TAB3P1-202ENST00000452645 1634 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 138.3 ms