Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.91□□□□□ -1.62
TRIM55Q9BYV6 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.91□□□□□ -1.62
TRIM55Q9BYV6 ADI1P3-201ENST00000549509 470 ntBASIC4.91□□□□□ -1.62
TRIM55Q9BYV6 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.91□□□□□ -1.62
TRIM55Q9BYV6 AC005951.2-201ENST00000576282 495 ntBASIC4.91□□□□□ -1.62
TRIM55Q9BYV6 MIR4330-201ENST00000579077 105 ntBASIC4.91□□□□□ -1.62
TRIM55Q9BYV6 UBE2V2P2-201ENST00000587677 504 ntBASIC4.91□□□□□ -1.62
TRIM55Q9BYV6 AP001521.2-201ENST00000608772 546 ntBASIC4.91□□□□□ -1.62
TRIM55Q9BYV6 uc_338.18-201ENST00000615451 175 ntBASIC4.91□□□□□ -1.62
TRIM55Q9BYV6 AC104985.2-201ENST00000620598 500 ntBASIC4.91□□□□□ -1.62
TRIM55Q9BYV6 AL360181.4-201ENST00000621752 134 ntBASIC4.91□□□□□ -1.62
TRIM55Q9BYV6 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.91□□□□□ -1.62
TRIM55Q9BYV6 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.91□□□□□ -1.62
TRIM55Q9BYV6 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM55Q9BYV6 API5P2-201ENST00000397055 1498 ntBASIC4.91□□□□□ -1.62
TRIM55Q9BYV6 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
TRIM55Q9BYV6 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.91□□□□□ -1.62
TRIM55Q9BYV6 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
TRIM55Q9BYV6 INTS6P1-201ENST00000504674 2530 ntBASIC4.91□□□□□ -1.62
TRIM55Q9BYV6 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.91□□□□□ -1.62
TRIM55Q9BYV6 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
TRIM55Q9BYV6 MAPK10-303ENST00000641324 3959 ntBASIC4.9□□□□□ -1.62
TRIM55Q9BYV6 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.9□□□□□ -1.62
TRIM55Q9BYV6 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.9□□□□□ -1.62
TRIM55Q9BYV6 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
TRIM55Q9BYV6 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
TRIM55Q9BYV6 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC4.9□□□□□ -1.63
TRIM55Q9BYV6 Y_RNA.72-201ENST00000362894 103 ntBASIC4.9□□□□□ -1.63
TRIM55Q9BYV6 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
TRIM55Q9BYV6 SNORA36C-201ENST00000384289 132 ntBASIC4.9□□□□□ -1.63
TRIM55Q9BYV6 RNU2-29P-201ENST00000410423 189 ntBASIC4.9□□□□□ -1.63
TRIM55Q9BYV6 RNU6-193P-201ENST00000410977 107 ntBASIC4.9□□□□□ -1.63
TRIM55Q9BYV6 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.9□□□□□ -1.63
TRIM55Q9BYV6 GJA6P-201ENST00000415117 1042 ntBASIC4.9□□□□□ -1.63
TRIM55Q9BYV6 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.9□□□□□ -1.63
TRIM55Q9BYV6 E2F6P2-201ENST00000420708 748 ntBASIC4.9□□□□□ -1.63
TRIM55Q9BYV6 DUTP6-201ENST00000425573 462 ntBASIC4.9□□□□□ -1.63
TRIM55Q9BYV6 AL732292.1-201ENST00000426692 226 ntBASIC4.9□□□□□ -1.63
TRIM55Q9BYV6 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.9□□□□□ -1.63
TRIM55Q9BYV6 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.9□□□□□ -1.63
TRIM55Q9BYV6 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.9□□□□□ -1.63
TRIM55Q9BYV6 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.9□□□□□ -1.63
TRIM55Q9BYV6 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.9□□□□□ -1.63
TRIM55Q9BYV6 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.9□□□□□ -1.63
TRIM55Q9BYV6 RPL21P133-201ENST00000443666 476 ntBASIC4.9□□□□□ -1.63
TRIM55Q9BYV6 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.9□□□□□ -1.63
TRIM55Q9BYV6 RPL23AP43-201ENST00000446445 471 ntBASIC4.9□□□□□ -1.63
TRIM55Q9BYV6 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.9□□□□□ -1.63
TRIM55Q9BYV6 AC009220.1-201ENST00000451614 275 ntBASIC4.9□□□□□ -1.63
TRIM55Q9BYV6 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.9□□□□□ -1.63
TRIM55Q9BYV6 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.9□□□□□ -1.63
TRIM55Q9BYV6 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4.9□□□□□ -1.63
TRIM55Q9BYV6 AC092324.1-201ENST00000468671 324 ntBASIC4.9□□□□□ -1.63
TRIM55Q9BYV6 RPL23AP55-201ENST00000498163 452 ntBASIC4.9□□□□□ -1.63
TRIM55Q9BYV6 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.9□□□□□ -1.63
TRIM55Q9BYV6 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.9□□□□□ -1.63
TRIM55Q9BYV6 GMPSP1-201ENST00000514075 579 ntBASIC4.9□□□□□ -1.63
TRIM55Q9BYV6 RN7SKP276-201ENST00000516242 268 ntBASIC4.9□□□□□ -1.63
TRIM55Q9BYV6 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.9□□□□□ -1.63
TRIM55Q9BYV6 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.9□□□□□ -1.63
TRIM55Q9BYV6 AP006587.4-201ENST00000526053 529 ntBASIC4.9□□□□□ -1.63
TRIM55Q9BYV6 AC021006.3-201ENST00000530771 192 ntBASIC4.9□□□□□ -1.63
TRIM55Q9BYV6 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.9□□□□□ -1.63
TRIM55Q9BYV6 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.9□□□□□ -1.63
TRIM55Q9BYV6 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.9□□□□□ -1.63
TRIM55Q9BYV6 AC087385.3-201ENST00000620477 187 ntBASIC4.9□□□□□ -1.63
TRIM55Q9BYV6 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC4.9□□□□□ -1.63
TRIM55Q9BYV6 AC091905.4-201ENST00000623432 202 ntBASIC4.9□□□□□ -1.63
TRIM55Q9BYV6 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.63
TRIM55Q9BYV6 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.9□□□□□ -1.63
TRIM55Q9BYV6 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.9□□□□□ -1.63
TRIM55Q9BYV6 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
TRIM55Q9BYV6 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
TRIM55Q9BYV6 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.89□□□□□ -1.63
TRIM55Q9BYV6 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM55Q9BYV6 AC139713.2-214ENST00000642059 1811 ntBASIC4.89□□□□□ -1.63
TRIM55Q9BYV6 Y_RNA.576-201ENST00000384781 102 ntBASIC4.89□□□□□ -1.63
TRIM55Q9BYV6 SNORA66-201ENST00000384792 133 ntBASIC4.89□□□□□ -1.63
TRIM55Q9BYV6 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
TRIM55Q9BYV6 MIR1182-201ENST00000408363 97 ntBASIC4.89□□□□□ -1.63
TRIM55Q9BYV6 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.89□□□□□ -1.63
TRIM55Q9BYV6 FAR2P4-202ENST00000425399 584 ntBASIC4.89□□□□□ -1.63
TRIM55Q9BYV6 AC008850.1-201ENST00000427546 362 ntBASIC4.89□□□□□ -1.63
TRIM55Q9BYV6 SRIP2-201ENST00000428470 166 ntBASIC4.89□□□□□ -1.63
TRIM55Q9BYV6 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.89□□□□□ -1.63
TRIM55Q9BYV6 CBWD4P-201ENST00000445695 655 ntBASIC4.89□□□□□ -1.63
TRIM55Q9BYV6 AC020550.1-201ENST00000447385 163 ntBASIC4.89□□□□□ -1.63
TRIM55Q9BYV6 RPS29P33-201ENST00000456717 146 ntBASIC4.89□□□□□ -1.63
TRIM55Q9BYV6 HMGB3P30-201ENST00000457863 606 ntBASIC4.89□□□□□ -1.63
TRIM55Q9BYV6 AC006463.2-201ENST00000473326 348 ntBASIC4.89□□□□□ -1.63
TRIM55Q9BYV6 AC108860.1-201ENST00000484521 383 ntBASIC4.89□□□□□ -1.63
TRIM55Q9BYV6 AC021146.3-201ENST00000511911 260 ntBASIC4.89□□□□□ -1.63
TRIM55Q9BYV6 LRRC34P2-201ENST00000514850 553 ntBASIC4.89□□□□□ -1.63
TRIM55Q9BYV6 MTCO1P35-201ENST00000515270 228 ntBASIC4.89□□□□□ -1.63
TRIM55Q9BYV6 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC4.89□□□□□ -1.63
TRIM55Q9BYV6 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.89□□□□□ -1.63
TRIM55Q9BYV6 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.89□□□□□ -1.63
TRIM55Q9BYV6 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.89□□□□□ -1.63
TRIM55Q9BYV6 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.89□□□□□ -1.63
TRIM55Q9BYV6 AC018638.8-201ENST00000588755 281 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms