Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 AC108059.3-201ENST00000456388 214 ntBASIC4.07□□□□□ -1.76
HERPUD2Q9BSE4 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HERPUD2Q9BSE4 RPS27AP1-201ENST00000475545 471 ntBASIC4.07□□□□□ -1.76
HERPUD2Q9BSE4 AC109486.1-201ENST00000486833 374 ntBASIC4.07□□□□□ -1.76
HERPUD2Q9BSE4 AC146944.2-203ENST00000502493 354 ntBASIC4.07□□□□□ -1.76
HERPUD2Q9BSE4 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC4.07□□□□□ -1.76
HERPUD2Q9BSE4 AC010486.3-201ENST00000511602 785 ntBASIC4.07□□□□□ -1.76
HERPUD2Q9BSE4 AC139495.1-202ENST00000513164 354 ntBASIC4.07□□□□□ -1.76
HERPUD2Q9BSE4 AC087373.1-201ENST00000524920 491 ntBASIC4.07□□□□□ -1.76
HERPUD2Q9BSE4 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC4.07□□□□□ -1.76
HERPUD2Q9BSE4 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.07□□□□□ -1.76
HERPUD2Q9BSE4 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC4.07□□□□□ -1.76
HERPUD2Q9BSE4 AL355836.1-201ENST00000555951 870 ntBASIC4.07□□□□□ -1.76
HERPUD2Q9BSE4 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC4.07□□□□□ -1.76
HERPUD2Q9BSE4 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.07□□□□□ -1.76
HERPUD2Q9BSE4 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.07□□□□□ -1.76
HERPUD2Q9BSE4 AC008507.1-201ENST00000587506 734 ntBASIC4.07□□□□□ -1.76
HERPUD2Q9BSE4 VN1R85P-201ENST00000601587 426 ntBASIC4.07□□□□□ -1.76
HERPUD2Q9BSE4 AC091167.4-201ENST00000605079 184 ntBASIC4.07□□□□□ -1.76
HERPUD2Q9BSE4 AC105129.3-201ENST00000605455 485 ntBASIC4.07□□□□□ -1.76
HERPUD2Q9BSE4 AL031775.1-201ENST00000607014 887 ntBASIC4.07□□□□□ -1.76
HERPUD2Q9BSE4 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC4.07□□□□□ -1.76
HERPUD2Q9BSE4 AC009570.1-201ENST00000609599 745 ntBASIC4.07□□□□□ -1.76
HERPUD2Q9BSE4 AL355472.4-201ENST00000610233 626 ntBASIC4.07□□□□□ -1.76
HERPUD2Q9BSE4 MIR6867-201ENST00000610636 67 ntBASIC4.07□□□□□ -1.76
HERPUD2Q9BSE4 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.07□□□□□ -1.76
HERPUD2Q9BSE4 AC068831.7-201ENST00000616954 363 ntBASIC4.07□□□□□ -1.76
HERPUD2Q9BSE4 AL591424.2-201ENST00000617023 128 ntBASIC4.07□□□□□ -1.76
HERPUD2Q9BSE4 RNA5SP196-201ENST00000625967 102 ntBASIC4.07□□□□□ -1.76
HERPUD2Q9BSE4 U6.98-201ENST00000637157 84 ntBASIC4.07□□□□□ -1.76
HERPUD2Q9BSE4 AC010149.2-201ENST00000637608 315 ntBASIC4.07□□□□□ -1.76
HERPUD2Q9BSE4 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
HERPUD2Q9BSE4 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HERPUD2Q9BSE4 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.07□□□□□ -1.76
HERPUD2Q9BSE4 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.07□□□□□ -1.76
HERPUD2Q9BSE4 OR4G2P-202ENST00000641004 1759 ntBASIC4.07□□□□□ -1.76
HERPUD2Q9BSE4 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HERPUD2Q9BSE4 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HERPUD2Q9BSE4 AC138915.3-201ENST00000562908 1389 ntBASIC4.06□□□□□ -1.76
HERPUD2Q9BSE4 RPL7P26-201ENST00000333817 754 ntBASIC4.06□□□□□ -1.76
HERPUD2Q9BSE4 RNU6-328P-201ENST00000390887 106 ntBASIC4.06□□□□□ -1.76
HERPUD2Q9BSE4 Z74696.2-201ENST00000436514 498 ntBASIC4.06□□□□□ -1.76
HERPUD2Q9BSE4 SETP5-201ENST00000437270 562 ntBASIC4.06□□□□□ -1.76
HERPUD2Q9BSE4 COX6CP12-201ENST00000446748 202 ntBASIC4.06□□□□□ -1.76
HERPUD2Q9BSE4 AC116337.2-201ENST00000477662 156 ntBASIC4.06□□□□□ -1.76
HERPUD2Q9BSE4 AC114967.1-201ENST00000504890 259 ntBASIC4.06□□□□□ -1.76
HERPUD2Q9BSE4 AC004069.2-201ENST00000505438 1114 ntBASIC4.06□□□□□ -1.76
HERPUD2Q9BSE4 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.06□□□□□ -1.76
HERPUD2Q9BSE4 RNU6-390P-201ENST00000516259 103 ntBASIC4.06□□□□□ -1.76
HERPUD2Q9BSE4 RNU6-201P-201ENST00000517100 61 ntBASIC4.06□□□□□ -1.76
HERPUD2Q9BSE4 RNA5SP179-201ENST00000517284 121 ntBASIC4.06□□□□□ -1.76
HERPUD2Q9BSE4 NDUFA5P2-201ENST00000519723 344 ntBASIC4.06□□□□□ -1.76
HERPUD2Q9BSE4 OR8R1P-201ENST00000543943 764 ntBASIC4.06□□□□□ -1.76
HERPUD2Q9BSE4 AC107016.1-201ENST00000550463 337 ntBASIC4.06□□□□□ -1.76
HERPUD2Q9BSE4 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.06□□□□□ -1.76
HERPUD2Q9BSE4 AL356432.3-201ENST00000568952 465 ntBASIC4.06□□□□□ -1.76
HERPUD2Q9BSE4 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.06□□□□□ -1.76
HERPUD2Q9BSE4 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC4.06□□□□□ -1.76
HERPUD2Q9BSE4 AL359999.1-201ENST00000604513 294 ntBASIC4.06□□□□□ -1.76
HERPUD2Q9BSE4 AC121334.2-201ENST00000605387 271 ntBASIC4.06□□□□□ -1.76
HERPUD2Q9BSE4 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.06□□□□□ -1.76
HERPUD2Q9BSE4 AL392048.1-201ENST00000613946 534 ntBASIC4.06□□□□□ -1.76
HERPUD2Q9BSE4 AC013476.2-201ENST00000614456 459 ntBASIC4.06□□□□□ -1.76
HERPUD2Q9BSE4 AL391261.4-201ENST00000616012 481 ntBASIC4.06□□□□□ -1.76
HERPUD2Q9BSE4 MIR3974-201ENST00000637126 96 ntBASIC4.06□□□□□ -1.76
HERPUD2Q9BSE4 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
HERPUD2Q9BSE4 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HERPUD2Q9BSE4 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HERPUD2Q9BSE4 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HERPUD2Q9BSE4 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
HERPUD2Q9BSE4 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HERPUD2Q9BSE4 ANKRD20A17P-201ENST00000511745 1330 ntBASIC4.05□□□□□ -1.76
HERPUD2Q9BSE4 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.05□□□□□ -1.76
HERPUD2Q9BSE4 RNU5A-8P-201ENST00000364102 114 ntBASIC4.05□□□□□ -1.76
HERPUD2Q9BSE4 RNU5E-5P-201ENST00000365379 116 ntBASIC4.05□□□□□ -1.76
HERPUD2Q9BSE4 RNU6-1197P-201ENST00000391183 107 ntBASIC4.05□□□□□ -1.76
HERPUD2Q9BSE4 HMGN2P8-201ENST00000391458 268 ntBASIC4.05□□□□□ -1.76
HERPUD2Q9BSE4 AC110754.1-201ENST00000399740 601 ntBASIC4.05□□□□□ -1.76
HERPUD2Q9BSE4 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
HERPUD2Q9BSE4 RNU4-6P-201ENST00000410804 122 ntBASIC4.05□□□□□ -1.76
HERPUD2Q9BSE4 RPL21P24-201ENST00000413752 448 ntBASIC4.05□□□□□ -1.76
HERPUD2Q9BSE4 BX842559.1-201ENST00000419615 532 ntBASIC4.05□□□□□ -1.76
HERPUD2Q9BSE4 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC4.05□□□□□ -1.76
HERPUD2Q9BSE4 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC4.05□□□□□ -1.76
HERPUD2Q9BSE4 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
HERPUD2Q9BSE4 HMGN2P20-201ENST00000437531 273 ntBASIC4.05□□□□□ -1.76
HERPUD2Q9BSE4 AL049734.2-201ENST00000441066 616 ntBASIC4.05□□□□□ -1.76
HERPUD2Q9BSE4 MTCO3P45-201ENST00000443036 613 ntBASIC4.05□□□□□ -1.76
HERPUD2Q9BSE4 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.05□□□□□ -1.76
HERPUD2Q9BSE4 AL500522.2-201ENST00000448562 343 ntBASIC4.05□□□□□ -1.76
HERPUD2Q9BSE4 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.05□□□□□ -1.76
HERPUD2Q9BSE4 RPS20P20-201ENST00000460498 340 ntBASIC4.05□□□□□ -1.76
HERPUD2Q9BSE4 RPL7P15-201ENST00000461190 712 ntBASIC4.05□□□□□ -1.76
HERPUD2Q9BSE4 AC008481.1-201ENST00000463278 396 ntBASIC4.05□□□□□ -1.76
HERPUD2Q9BSE4 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
HERPUD2Q9BSE4 AC012181.1-201ENST00000479895 423 ntBASIC4.05□□□□□ -1.76
HERPUD2Q9BSE4 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HERPUD2Q9BSE4 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.05□□□□□ -1.76
HERPUD2Q9BSE4 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.05□□□□□ -1.76
HERPUD2Q9BSE4 RNA5SP208-201ENST00000516156 78 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 140.8 ms