Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 AL034351.1-201ENST00000605288 668 ntBASIC3.82□□□□□ -1.8
NPAS1Q99742 AL031666.3-201ENST00000609320 1006 ntBASIC3.82□□□□□ -1.8
NPAS1Q99742 AC064801.1-201ENST00000612025 407 ntBASIC3.82□□□□□ -1.8
NPAS1Q99742 FAM27D1-201ENST00000612308 341 ntBASIC3.82□□□□□ -1.8
NPAS1Q99742 AC073534.2-201ENST00000620377 381 ntBASIC3.82□□□□□ -1.8
NPAS1Q99742 AC243312.2-201ENST00000623340 601 ntBASIC3.82□□□□□ -1.8
NPAS1Q99742 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.82□□□□□ -1.8
NPAS1Q99742 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NPAS1Q99742 AC105074.1-201ENST00000623380 3095 ntBASIC3.82□□□□□ -1.8
NPAS1Q99742 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
NPAS1Q99742 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NPAS1Q99742 DDX10P1-201ENST00000448545 1933 ntBASIC3.82□□□□□ -1.8
NPAS1Q99742 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
NPAS1Q99742 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.81□□□□□ -1.8
NPAS1Q99742 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
NPAS1Q99742 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NPAS1Q99742 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
NPAS1Q99742 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.81□□□□□ -1.8
NPAS1Q99742 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.81□□□□□ -1.8
NPAS1Q99742 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NPAS1Q99742 OR1S2-201ENST00000302592 978 ntBASIC3.81□□□□□ -1.8
NPAS1Q99742 RNU6-173P-201ENST00000364215 104 ntBASIC3.81□□□□□ -1.8
NPAS1Q99742 RNA5SP167-201ENST00000365461 116 ntBASIC3.81□□□□□ -1.8
NPAS1Q99742 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.81□□□□□ -1.8
NPAS1Q99742 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.81□□□□□ -1.8
NPAS1Q99742 RNU4-65P-201ENST00000410473 140 ntBASIC3.81□□□□□ -1.8
NPAS1Q99742 RNA5SP306-201ENST00000411087 107 ntBASIC3.81□□□□□ -1.8
NPAS1Q99742 EI24P1-201ENST00000416584 867 ntBASIC3.81□□□□□ -1.8
NPAS1Q99742 RPL21P112-201ENST00000434403 463 ntBASIC3.81□□□□□ -1.8
NPAS1Q99742 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.81□□□□□ -1.8
NPAS1Q99742 RPS11P1-201ENST00000451072 473 ntBASIC3.81□□□□□ -1.8
NPAS1Q99742 SNRPGP5-201ENST00000456003 220 ntBASIC3.81□□□□□ -1.8
NPAS1Q99742 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.81□□□□□ -1.8
NPAS1Q99742 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.81□□□□□ -1.8
NPAS1Q99742 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.81□□□□□ -1.8
NPAS1Q99742 RPL9P6-201ENST00000492764 598 ntBASIC3.81□□□□□ -1.8
NPAS1Q99742 KCTD9P5-201ENST00000504141 1170 ntBASIC3.81□□□□□ -1.8
NPAS1Q99742 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.81□□□□□ -1.8
NPAS1Q99742 AC093824.1-201ENST00000508796 343 ntBASIC3.81□□□□□ -1.8
NPAS1Q99742 PARP4P3-201ENST00000510265 317 ntBASIC3.81□□□□□ -1.8
NPAS1Q99742 RNU6-506P-201ENST00000516553 94 ntBASIC3.81□□□□□ -1.8
NPAS1Q99742 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.81□□□□□ -1.8
NPAS1Q99742 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.81□□□□□ -1.8
NPAS1Q99742 AC105233.3-201ENST00000531125 744 ntBASIC3.81□□□□□ -1.8
NPAS1Q99742 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.81□□□□□ -1.8
NPAS1Q99742 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.81□□□□□ -1.8
NPAS1Q99742 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.81□□□□□ -1.8
NPAS1Q99742 AL133153.1-201ENST00000557756 303 ntBASIC3.81□□□□□ -1.8
NPAS1Q99742 AL845331.3-202ENST00000562856 261 ntBASIC3.81□□□□□ -1.8
NPAS1Q99742 IPO5P1-202ENST00000600039 287 ntBASIC3.81□□□□□ -1.8
NPAS1Q99742 AL022154.1-201ENST00000604698 785 ntBASIC3.81□□□□□ -1.8
NPAS1Q99742 AL450472.3-201ENST00000615578 367 ntBASIC3.81□□□□□ -1.8
NPAS1Q99742 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.81□□□□□ -1.8
NPAS1Q99742 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.81□□□□□ -1.8
NPAS1Q99742 AL138713.1-201ENST00000624026 2130 ntBASIC3.81□□□□□ -1.8
NPAS1Q99742 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.81□□□□□ -1.8
NPAS1Q99742 OR5H6-203ENST00000642105 978 ntBASIC3.81□□□□□ -1.8
NPAS1Q99742 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NPAS1Q99742 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NPAS1Q99742 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.81□□□□□ -1.8
NPAS1Q99742 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
NPAS1Q99742 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
NPAS1Q99742 NOL8P1-201ENST00000508336 3529 ntBASIC3.81□□□□□ -1.8
NPAS1Q99742 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NPAS1Q99742 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
NPAS1Q99742 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
NPAS1Q99742 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NPAS1Q99742 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NPAS1Q99742 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NPAS1Q99742 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NPAS1Q99742 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
NPAS1Q99742 RNU6-223P-201ENST00000362830 107 ntBASIC3.8□□□□□ -1.8
NPAS1Q99742 RNA5SP322-201ENST00000363617 119 ntBASIC3.8□□□□□ -1.8
NPAS1Q99742 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.8□□□□□ -1.8
NPAS1Q99742 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.8□□□□□ -1.8
NPAS1Q99742 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.8□□□□□ -1.8
NPAS1Q99742 EIF1P3-201ENST00000423841 334 ntBASIC3.8□□□□□ -1.8
NPAS1Q99742 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.8□□□□□ -1.8
NPAS1Q99742 RSL24D1P6-201ENST00000426934 401 ntBASIC3.8□□□□□ -1.8
NPAS1Q99742 AC079780.1-201ENST00000428259 207 ntBASIC3.8□□□□□ -1.8
NPAS1Q99742 C8orf59P1-201ENST00000429930 303 ntBASIC3.8□□□□□ -1.8
NPAS1Q99742 BTF3P10-201ENST00000433415 495 ntBASIC3.8□□□□□ -1.8
NPAS1Q99742 AL451074.3-201ENST00000437709 472 ntBASIC3.8□□□□□ -1.8
NPAS1Q99742 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.8□□□□□ -1.8
NPAS1Q99742 HMGN2P21-201ENST00000447764 270 ntBASIC3.8□□□□□ -1.8
NPAS1Q99742 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.8□□□□□ -1.8
NPAS1Q99742 AL359073.1-201ENST00000448036 403 ntBASIC3.8□□□□□ -1.8
NPAS1Q99742 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.8□□□□□ -1.8
NPAS1Q99742 RN7SL860P-201ENST00000473738 223 ntBASIC3.8□□□□□ -1.8
NPAS1Q99742 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.8□□□□□ -1.8
NPAS1Q99742 AC007182.2-201ENST00000489251 402 ntBASIC3.8□□□□□ -1.8
NPAS1Q99742 AC068305.1-201ENST00000497406 726 ntBASIC3.8□□□□□ -1.8
NPAS1Q99742 AC010460.1-201ENST00000507087 466 ntBASIC3.8□□□□□ -1.8
NPAS1Q99742 AC021146.1-201ENST00000511202 716 ntBASIC3.8□□□□□ -1.8
NPAS1Q99742 FTH1P21-201ENST00000512179 511 ntBASIC3.8□□□□□ -1.8
NPAS1Q99742 AC022483.1-201ENST00000514020 567 ntBASIC3.8□□□□□ -1.8
NPAS1Q99742 RNU6-390P-201ENST00000516259 103 ntBASIC3.8□□□□□ -1.8
NPAS1Q99742 RNA5SP337-201ENST00000517007 109 ntBASIC3.8□□□□□ -1.8
NPAS1Q99742 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.8□□□□□ -1.8
NPAS1Q99742 AP003730.1-201ENST00000524605 285 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms