Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 NANOGP5-201ENST00000424456 877 ntBASIC2.73□□□□□ -1.97
CDX2Q99626 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC2.73□□□□□ -1.97
CDX2Q99626 RPS12P2-201ENST00000439728 269 ntBASIC2.73□□□□□ -1.97
CDX2Q99626 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC2.73□□□□□ -1.97
CDX2Q99626 snoU13.3-201ENST00000459441 104 ntBASIC2.73□□□□□ -1.97
CDX2Q99626 AC008379.1-201ENST00000463655 464 ntBASIC2.73□□□□□ -1.97
CDX2Q99626 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC2.73□□□□□ -1.97
CDX2Q99626 AC068587.2-201ENST00000478386 781 ntBASIC2.73□□□□□ -1.97
CDX2Q99626 RPL9P6-201ENST00000492764 598 ntBASIC2.73□□□□□ -1.97
CDX2Q99626 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CDX2Q99626 AC104027.1-201ENST00000521887 300 ntBASIC2.73□□□□□ -1.97
CDX2Q99626 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.73□□□□□ -1.97
CDX2Q99626 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CDX2Q99626 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC2.73□□□□□ -1.97
CDX2Q99626 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC2.73□□□□□ -1.97
CDX2Q99626 MTCO3P24-201ENST00000572729 782 ntBASIC2.73□□□□□ -1.97
CDX2Q99626 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CDX2Q99626 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CDX2Q99626 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CDX2Q99626 MTND5P31-201ENST00000419366 1374 ntBASIC2.73□□□□□ -1.97
CDX2Q99626 AC005539.1-201ENST00000443768 1479 ntBASIC2.72□□□□□ -1.97
CDX2Q99626 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.72□□□□□ -1.97
CDX2Q99626 RNU1-35P-201ENST00000362782 153 ntBASIC2.72□□□□□ -1.97
CDX2Q99626 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
CDX2Q99626 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC2.72□□□□□ -1.97
CDX2Q99626 AC245291.1-201ENST00000419501 328 ntBASIC2.72□□□□□ -1.97
CDX2Q99626 OFD1P18Y-201ENST00000420889 959 ntBASIC2.72□□□□□ -1.97
CDX2Q99626 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC2.72□□□□□ -1.97
CDX2Q99626 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.72□□□□□ -1.97
CDX2Q99626 PSMA2P3-201ENST00000429685 675 ntBASIC2.72□□□□□ -1.97
CDX2Q99626 AL512637.2-201ENST00000431287 1256 ntBASIC2.72□□□□□ -1.97
CDX2Q99626 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC2.72□□□□□ -1.97
CDX2Q99626 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.72□□□□□ -1.97
CDX2Q99626 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC2.72□□□□□ -1.97
CDX2Q99626 AC125238.1-201ENST00000448842 249 ntBASIC2.72□□□□□ -1.97
CDX2Q99626 AC093392.2-201ENST00000450682 337 ntBASIC2.72□□□□□ -1.97
CDX2Q99626 RPS27P29-201ENST00000463110 252 ntBASIC2.72□□□□□ -1.97
CDX2Q99626 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC2.72□□□□□ -1.97
CDX2Q99626 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC2.72□□□□□ -1.97
CDX2Q99626 AC108078.3-201ENST00000502633 489 ntBASIC2.72□□□□□ -1.97
CDX2Q99626 AC021146.5-201ENST00000503544 545 ntBASIC2.72□□□□□ -1.97
CDX2Q99626 AC008628.1-201ENST00000508663 265 ntBASIC2.72□□□□□ -1.97
CDX2Q99626 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.72□□□□□ -1.97
CDX2Q99626 SNORA64.4-201ENST00000516632 81 ntBASIC2.72□□□□□ -1.97
CDX2Q99626 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.72□□□□□ -1.97
CDX2Q99626 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.72□□□□□ -1.97
CDX2Q99626 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.72□□□□□ -1.97
CDX2Q99626 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CDX2Q99626 MTCO1P40-201ENST00000574371 625 ntBASIC2.72□□□□□ -1.97
CDX2Q99626 AC009163.5-201ENST00000575421 637 ntBASIC2.72□□□□□ -1.97
CDX2Q99626 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC2.72□□□□□ -1.97
CDX2Q99626 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC2.72□□□□□ -1.97
CDX2Q99626 AC006213.4-201ENST00000616184 634 ntBASIC2.72□□□□□ -1.97
CDX2Q99626 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
CDX2Q99626 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CDX2Q99626 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CDX2Q99626 AC073055.1-201ENST00000456901 1621 ntBASIC2.71□□□□□ -1.97
CDX2Q99626 MTND5P27-201ENST00000428871 1720 ntBASIC2.71□□□□□ -1.98
CDX2Q99626 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.71□□□□□ -1.98
CDX2Q99626 MIR26A1-201ENST00000362205 77 ntBASIC2.71□□□□□ -1.98
CDX2Q99626 RNU6-335P-201ENST00000364563 113 ntBASIC2.71□□□□□ -1.98
CDX2Q99626 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
CDX2Q99626 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
CDX2Q99626 RNU6-354P-201ENST00000383862 107 ntBASIC2.71□□□□□ -1.98
CDX2Q99626 RNU6-444P-201ENST00000383988 108 ntBASIC2.71□□□□□ -1.98
CDX2Q99626 RNU6-610P-201ENST00000384264 107 ntBASIC2.71□□□□□ -1.98
CDX2Q99626 RNA5SP213-201ENST00000391031 106 ntBASIC2.71□□□□□ -1.98
CDX2Q99626 RNU1-101P-201ENST00000391171 127 ntBASIC2.71□□□□□ -1.98
CDX2Q99626 AL138880.1-201ENST00000405824 642 ntBASIC2.71□□□□□ -1.98
CDX2Q99626 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC2.71□□□□□ -1.98
CDX2Q99626 HMGB3P23-201ENST00000414981 585 ntBASIC2.71□□□□□ -1.98
CDX2Q99626 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.71□□□□□ -1.98
CDX2Q99626 RPP40P1-201ENST00000426762 456 ntBASIC2.71□□□□□ -1.98
CDX2Q99626 HMGN2P13-201ENST00000476476 274 ntBASIC2.71□□□□□ -1.98
CDX2Q99626 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC2.71□□□□□ -1.98
CDX2Q99626 AC104057.1-201ENST00000515547 497 ntBASIC2.71□□□□□ -1.98
CDX2Q99626 AC243972.3-201ENST00000539655 198 ntBASIC2.71□□□□□ -1.98
CDX2Q99626 MIR4504-201ENST00000577413 92 ntBASIC2.71□□□□□ -1.98
CDX2Q99626 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.71□□□□□ -1.98
CDX2Q99626 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC2.71□□□□□ -1.98
CDX2Q99626 AC098483.2-201ENST00000603158 454 ntBASIC2.71□□□□□ -1.98
CDX2Q99626 AP002906.1-201ENST00000603405 233 ntBASIC2.71□□□□□ -1.98
CDX2Q99626 AC107294.3-201ENST00000609211 526 ntBASIC2.71□□□□□ -1.98
CDX2Q99626 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC2.71□□□□□ -1.98
CDX2Q99626 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.71□□□□□ -1.98
CDX2Q99626 AC079228.1-201ENST00000624774 1049 ntBASIC2.71□□□□□ -1.98
CDX2Q99626 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.71□□□□□ -1.98
CDX2Q99626 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CDX2Q99626 FAM35CP-201ENST00000554755 2470 ntBASIC2.71□□□□□ -1.98
CDX2Q99626 RNA5SP383-201ENST00000362934 120 ntBASIC2.7□□□□□ -1.98
CDX2Q99626 Y_RNA.110-201ENST00000363220 99 ntBASIC2.7□□□□□ -1.98
CDX2Q99626 SNORD56.3-201ENST00000363507 71 ntBASIC2.7□□□□□ -1.98
CDX2Q99626 RNU1-91P-201ENST00000364746 163 ntBASIC2.7□□□□□ -1.98
CDX2Q99626 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC2.7□□□□□ -1.98
CDX2Q99626 RNU6-1226P-201ENST00000384317 107 ntBASIC2.7□□□□□ -1.98
CDX2Q99626 RNU6-921P-201ENST00000384361 107 ntBASIC2.7□□□□□ -1.98
CDX2Q99626 MIR16-1-201ENST00000385271 89 ntBASIC2.7□□□□□ -1.98
CDX2Q99626 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.7□□□□□ -1.98
CDX2Q99626 TOMM22P1-201ENST00000418578 312 ntBASIC2.7□□□□□ -1.98
CDX2Q99626 RPL23AP22-201ENST00000437556 453 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms