Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 AL035411.2-201ENST00000604022 421 ntBASIC1.56□□□□□ -2.16
SPENQ96T58 RNU6-249P-201ENST00000363016 102 ntBASIC1.55□□□□□ -2.16
SPENQ96T58 Y_RNA.458-201ENST00000384240 102 ntBASIC1.55□□□□□ -2.16
SPENQ96T58 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC1.55□□□□□ -2.16
SPENQ96T58 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC1.55□□□□□ -2.16
SPENQ96T58 AC104435.1-201ENST00000483483 166 ntBASIC1.55□□□□□ -2.16
SPENQ96T58 AC093767.1-201ENST00000504523 156 ntBASIC1.55□□□□□ -2.16
SPENQ96T58 AC093331.1-201ENST00000521474 169 ntBASIC1.55□□□□□ -2.16
SPENQ96T58 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC1.55□□□□□ -2.16
SPENQ96T58 RNA5SP38-201ENST00000410750 119 ntBASIC1.55□□□□□ -2.16
SPENQ96T58 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.55□□□□□ -2.16
SPENQ96T58 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC1.55□□□□□ -2.16
SPENQ96T58 AC015720.1-201ENST00000565251 277 ntBASIC1.55□□□□□ -2.16
SPENQ96T58 AC105429.2-201ENST00000610567 517 ntBASIC1.55□□□□□ -2.16
SPENQ96T58 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC1.55□□□□□ -2.16
SPENQ96T58 BX649567.1-201ENST00000642071 1134 ntBASIC1.55□□□□□ -2.16
SPENQ96T58 AC245100.2-201ENST00000454544 1679 ntBASIC1.55□□□□□ -2.16
SPENQ96T58 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC1.55□□□□□ -2.16
SPENQ96T58 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.55□□□□□ -2.16
SPENQ96T58 CALM1P2-201ENST00000452941 448 ntBASIC1.55□□□□□ -2.16
SPENQ96T58 HMGN1P8-201ENST00000463578 288 ntBASIC1.55□□□□□ -2.16
SPENQ96T58 AC104564.1-201ENST00000493028 407 ntBASIC1.55□□□□□ -2.16
SPENQ96T58 RFPL1S-203ENST00000539579 330 ntBASIC1.55□□□□□ -2.16
SPENQ96T58 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC1.55□□□□□ -2.16
SPENQ96T58 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC1.55□□□□□ -2.16
SPENQ96T58 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
SPENQ96T58 DYNLT3P1-201ENST00000378574 347 ntBASIC1.54□□□□□ -2.16
SPENQ96T58 RNU6-1080P-201ENST00000383982 107 ntBASIC1.54□□□□□ -2.16
SPENQ96T58 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.54□□□□□ -2.16
SPENQ96T58 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC1.54□□□□□ -2.16
SPENQ96T58 AC092159.4-201ENST00000624944 550 ntBASIC1.54□□□□□ -2.16
SPENQ96T58 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC1.54□□□□□ -2.16
SPENQ96T58 MIR3074-201ENST00000384885 81 ntBASIC1.54□□□□□ -2.16
SPENQ96T58 AL138787.1-202ENST00000437804 898 ntBASIC1.54□□□□□ -2.16
SPENQ96T58 RNA5SP385-201ENST00000515947 110 ntBASIC1.54□□□□□ -2.16
SPENQ96T58 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.54□□□□□ -2.16
SPENQ96T58 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.54□□□□□ -2.16
SPENQ96T58 OR4G1P-203ENST00000641984 1631 ntBASIC1.54□□□□□ -2.16
SPENQ96T58 AC110774.1-201ENST00000623567 2018 ntBASIC1.54□□□□□ -2.16
SPENQ96T58 AL035405.1-201ENST00000400795 710 ntBASIC1.54□□□□□ -2.16
SPENQ96T58 AL121972.1-201ENST00000402023 252 ntBASIC1.54□□□□□ -2.16
SPENQ96T58 MIR548J-201ENST00000408833 112 ntBASIC1.54□□□□□ -2.16
SPENQ96T58 POLHP1-201ENST00000411806 470 ntBASIC1.54□□□□□ -2.16
SPENQ96T58 VIS1.1-201ENST00000610517 203 ntBASIC1.54□□□□□ -2.16
SPENQ96T58 AL133216.2-202ENST00000634512 349 ntBASIC1.54□□□□□ -2.16
SPENQ96T58 AP000553.5-201ENST00000641933 54 ntBASIC1.54□□□□□ -2.16
SPENQ96T58 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.53□□□□□ -2.16
SPENQ96T58 AC131280.1-202ENST00000624067 4211 ntBASIC1.53□□□□□ -2.16
SPENQ96T58 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC1.53□□□□□ -2.16
SPENQ96T58 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
SPENQ96T58 MTCYBP7-201ENST00000419540 1134 ntBASIC1.53□□□□□ -2.16
SPENQ96T58 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.53□□□□□ -2.16
SPENQ96T58 AC007536.1-201ENST00000533382 349 ntBASIC1.53□□□□□ -2.16
SPENQ96T58 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.53□□□□□ -2.16
SPENQ96T58 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
SPENQ96T58 AC092447.7-201ENST00000422212 1621 ntBASIC1.53□□□□□ -2.16
SPENQ96T58 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC1.53□□□□□ -2.17
SPENQ96T58 TRIM60P13-201ENST00000432350 1283 ntBASIC1.53□□□□□ -2.17
SPENQ96T58 RPL39P40-201ENST00000445481 146 ntBASIC1.53□□□□□ -2.17
SPENQ96T58 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.53□□□□□ -2.17
SPENQ96T58 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.53□□□□□ -2.17
SPENQ96T58 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC1.53□□□□□ -2.17
SPENQ96T58 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.17
SPENQ96T58 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC1.52□□□□□ -2.17
SPENQ96T58 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.52□□□□□ -2.17
SPENQ96T58 AL021397.1-201ENST00000451806 248 ntBASIC1.52□□□□□ -2.17
SPENQ96T58 EIF2S2P4-201ENST00000461070 984 ntBASIC1.52□□□□□ -2.17
SPENQ96T58 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
SPENQ96T58 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC1.52□□□□□ -2.17
SPENQ96T58 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC1.52□□□□□ -2.17
SPENQ96T58 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC1.52□□□□□ -2.17
SPENQ96T58 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC1.52□□□□□ -2.17
SPENQ96T58 RNA5SP160-201ENST00000364866 120 ntBASIC1.52□□□□□ -2.17
SPENQ96T58 SNORD48-201ENST00000364953 64 ntBASIC1.52□□□□□ -2.17
SPENQ96T58 RPL23AP39-201ENST00000415533 405 ntBASIC1.52□□□□□ -2.17
SPENQ96T58 OR7L1P-201ENST00000456181 380 ntBASIC1.52□□□□□ -2.17
SPENQ96T58 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC1.52□□□□□ -2.17
SPENQ96T58 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC1.52□□□□□ -2.17
SPENQ96T58 SEPT7P7-201ENST00000420492 1301 ntBASIC1.52□□□□□ -2.17
SPENQ96T58 SNORA7.1-201ENST00000363750 139 ntBASIC1.52□□□□□ -2.17
SPENQ96T58 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC1.52□□□□□ -2.17
SPENQ96T58 KATNBL1P3-201ENST00000443475 909 ntBASIC1.52□□□□□ -2.17
SPENQ96T58 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.52□□□□□ -2.17
SPENQ96T58 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.52□□□□□ -2.17
SPENQ96T58 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC1.52□□□□□ -2.17
SPENQ96T58 AC087241.2-201ENST00000535801 324 ntBASIC1.52□□□□□ -2.17
SPENQ96T58 AL389895.1-201ENST00000554127 252 ntBASIC1.52□□□□□ -2.17
SPENQ96T58 MIR151B-201ENST00000584249 96 ntBASIC1.52□□□□□ -2.17
SPENQ96T58 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
SPENQ96T58 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC1.51□□□□□ -2.17
SPENQ96T58 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
SPENQ96T58 RNA5SP27-201ENST00000363839 119 ntBASIC1.51□□□□□ -2.17
SPENQ96T58 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
SPENQ96T58 SNORA26.7-201ENST00000391288 122 ntBASIC1.51□□□□□ -2.17
SPENQ96T58 AL138799.3-201ENST00000438968 350 ntBASIC1.51□□□□□ -2.17
SPENQ96T58 AIG1P1-201ENST00000503376 148 ntBASIC1.51□□□□□ -2.17
SPENQ96T58 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC1.51□□□□□ -2.17
SPENQ96T58 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.51□□□□□ -2.17
SPENQ96T58 RN7SL793P-201ENST00000583259 296 ntBASIC1.51□□□□□ -2.17
SPENQ96T58 AC092326.2-201ENST00000624772 1561 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms