Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC4.62□□□□□ -1.67
CDK5RAP1Q96SZ6 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CDK5RAP1Q96SZ6 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.62□□□□□ -1.67
CDK5RAP1Q96SZ6 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.62□□□□□ -1.67
CDK5RAP1Q96SZ6 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.62□□□□□ -1.67
CDK5RAP1Q96SZ6 AC113403.1-201ENST00000604910 193 ntBASIC4.62□□□□□ -1.67
CDK5RAP1Q96SZ6 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.62□□□□□ -1.67
CDK5RAP1Q96SZ6 AC140479.6-201ENST00000633535 357 ntBASIC4.62□□□□□ -1.67
CDK5RAP1Q96SZ6 AC026634.1-201ENST00000634369 198 ntBASIC4.62□□□□□ -1.67
CDK5RAP1Q96SZ6 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CDK5RAP1Q96SZ6 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CDK5RAP1Q96SZ6 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.62□□□□□ -1.67
CDK5RAP1Q96SZ6 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CDK5RAP1Q96SZ6 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
CDK5RAP1Q96SZ6 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.61□□□□□ -1.67
CDK5RAP1Q96SZ6 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CDK5RAP1Q96SZ6 EIF2AP4-201ENST00000424793 1781 ntBASIC4.61□□□□□ -1.67
CDK5RAP1Q96SZ6 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CDK5RAP1Q96SZ6 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CDK5RAP1Q96SZ6 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CDK5RAP1Q96SZ6 RNA5SP307-201ENST00000362863 116 ntBASIC4.61□□□□□ -1.67
CDK5RAP1Q96SZ6 RNA5SP28-201ENST00000363841 119 ntBASIC4.61□□□□□ -1.67
CDK5RAP1Q96SZ6 RNU1-130P-201ENST00000363930 160 ntBASIC4.61□□□□□ -1.67
CDK5RAP1Q96SZ6 MIR1-2-201ENST00000384961 85 ntBASIC4.61□□□□□ -1.67
CDK5RAP1Q96SZ6 RNU6-510P-201ENST00000391239 108 ntBASIC4.61□□□□□ -1.67
CDK5RAP1Q96SZ6 RPL23AP32-201ENST00000395315 459 ntBASIC4.61□□□□□ -1.67
CDK5RAP1Q96SZ6 RN7SKP266-201ENST00000410232 287 ntBASIC4.61□□□□□ -1.67
CDK5RAP1Q96SZ6 RNA5SP146-201ENST00000410743 123 ntBASIC4.61□□□□□ -1.67
CDK5RAP1Q96SZ6 SNORA74C-2-201ENST00000411179 201 ntBASIC4.61□□□□□ -1.67
CDK5RAP1Q96SZ6 AC234782.4-201ENST00000417646 1048 ntBASIC4.61□□□□□ -1.67
CDK5RAP1Q96SZ6 DUTP6-201ENST00000425573 462 ntBASIC4.61□□□□□ -1.67
CDK5RAP1Q96SZ6 AL162388.1-201ENST00000450912 352 ntBASIC4.61□□□□□ -1.67
CDK5RAP1Q96SZ6 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC4.61□□□□□ -1.67
CDK5RAP1Q96SZ6 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.61□□□□□ -1.67
CDK5RAP1Q96SZ6 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.61□□□□□ -1.67
CDK5RAP1Q96SZ6 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC4.61□□□□□ -1.67
CDK5RAP1Q96SZ6 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4.61□□□□□ -1.67
CDK5RAP1Q96SZ6 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.61□□□□□ -1.67
CDK5RAP1Q96SZ6 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.61□□□□□ -1.67
CDK5RAP1Q96SZ6 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CDK5RAP1Q96SZ6 AC114797.1-201ENST00000514003 728 ntBASIC4.61□□□□□ -1.67
CDK5RAP1Q96SZ6 RNU6-559P-201ENST00000516151 98 ntBASIC4.61□□□□□ -1.67
CDK5RAP1Q96SZ6 Y_RNA.718-201ENST00000517110 102 ntBASIC4.61□□□□□ -1.67
CDK5RAP1Q96SZ6 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC4.61□□□□□ -1.67
CDK5RAP1Q96SZ6 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.61□□□□□ -1.67
CDK5RAP1Q96SZ6 CYCSP28-201ENST00000534284 321 ntBASIC4.61□□□□□ -1.67
CDK5RAP1Q96SZ6 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.61□□□□□ -1.67
CDK5RAP1Q96SZ6 MIR3149-201ENST00000584629 83 ntBASIC4.61□□□□□ -1.67
CDK5RAP1Q96SZ6 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.61□□□□□ -1.67
CDK5RAP1Q96SZ6 POLR3GP2-201ENST00000588366 668 ntBASIC4.61□□□□□ -1.67
CDK5RAP1Q96SZ6 AL669831.4-202ENST00000590817 238 ntBASIC4.61□□□□□ -1.67
CDK5RAP1Q96SZ6 7SK.7-201ENST00000603504 247 ntBASIC4.61□□□□□ -1.67
CDK5RAP1Q96SZ6 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC4.61□□□□□ -1.67
CDK5RAP1Q96SZ6 MIR6798-201ENST00000612887 67 ntBASIC4.61□□□□□ -1.67
CDK5RAP1Q96SZ6 LINC00901.1-201ENST00000617252 152 ntBASIC4.61□□□□□ -1.67
CDK5RAP1Q96SZ6 AL354950.2-201ENST00000617939 290 ntBASIC4.61□□□□□ -1.67
CDK5RAP1Q96SZ6 MIR6891-201ENST00000618788 93 ntBASIC4.61□□□□□ -1.67
CDK5RAP1Q96SZ6 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.61□□□□□ -1.67
CDK5RAP1Q96SZ6 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CDK5RAP1Q96SZ6 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CDK5RAP1Q96SZ6 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CDK5RAP1Q96SZ6 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
CDK5RAP1Q96SZ6 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.61□□□□□ -1.67
CDK5RAP1Q96SZ6 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.61□□□□□ -1.67
CDK5RAP1Q96SZ6 OR4G1P-203ENST00000641984 1631 ntBASIC4.61□□□□□ -1.67
CDK5RAP1Q96SZ6 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.61□□□□□ -1.67
CDK5RAP1Q96SZ6 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CDK5RAP1Q96SZ6 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CDK5RAP1Q96SZ6 AC093311.1-201ENST00000506586 2021 ntBASIC4.6□□□□□ -1.67
CDK5RAP1Q96SZ6 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CDK5RAP1Q96SZ6 Y_RNA.193-201ENST00000363979 102 ntBASIC4.6□□□□□ -1.67
CDK5RAP1Q96SZ6 RNU6-639P-201ENST00000384074 107 ntBASIC4.6□□□□□ -1.67
CDK5RAP1Q96SZ6 RNU6-831P-201ENST00000384548 107 ntBASIC4.6□□□□□ -1.67
CDK5RAP1Q96SZ6 RNU6-952P-201ENST00000391164 108 ntBASIC4.6□□□□□ -1.67
CDK5RAP1Q96SZ6 AL121834.1-202ENST00000404494 277 ntBASIC4.6□□□□□ -1.67
CDK5RAP1Q96SZ6 AL356967.1-201ENST00000406305 431 ntBASIC4.6□□□□□ -1.67
CDK5RAP1Q96SZ6 MIR1305-201ENST00000408300 86 ntBASIC4.6□□□□□ -1.67
CDK5RAP1Q96SZ6 RNU2-28P-201ENST00000410457 189 ntBASIC4.6□□□□□ -1.67
CDK5RAP1Q96SZ6 RN7SKP222-201ENST00000410651 315 ntBASIC4.6□□□□□ -1.67
CDK5RAP1Q96SZ6 SNRPFP1-201ENST00000414761 252 ntBASIC4.6□□□□□ -1.67
CDK5RAP1Q96SZ6 PMCHL1-202ENST00000423102 261 ntBASIC4.6□□□□□ -1.67
CDK5RAP1Q96SZ6 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.6□□□□□ -1.67
CDK5RAP1Q96SZ6 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.6□□□□□ -1.67
CDK5RAP1Q96SZ6 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.6□□□□□ -1.67
CDK5RAP1Q96SZ6 MTATP8P1-201ENST00000467115 207 ntBASIC4.6□□□□□ -1.67
CDK5RAP1Q96SZ6 RN7SL385P-201ENST00000468873 276 ntBASIC4.6□□□□□ -1.67
CDK5RAP1Q96SZ6 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.6□□□□□ -1.67
CDK5RAP1Q96SZ6 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.6□□□□□ -1.67
CDK5RAP1Q96SZ6 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.6□□□□□ -1.67
CDK5RAP1Q96SZ6 AC105417.1-201ENST00000514691 285 ntBASIC4.6□□□□□ -1.67
CDK5RAP1Q96SZ6 RNU6-123P-201ENST00000516163 102 ntBASIC4.6□□□□□ -1.67
CDK5RAP1Q96SZ6 RNU6-347P-201ENST00000516658 105 ntBASIC4.6□□□□□ -1.67
CDK5RAP1Q96SZ6 Y_RNA.720-201ENST00000517166 92 ntBASIC4.6□□□□□ -1.67
CDK5RAP1Q96SZ6 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.6□□□□□ -1.67
CDK5RAP1Q96SZ6 HIGD1AP6-201ENST00000521833 279 ntBASIC4.6□□□□□ -1.67
CDK5RAP1Q96SZ6 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.6□□□□□ -1.67
CDK5RAP1Q96SZ6 COPS8P3-201ENST00000526024 482 ntBASIC4.6□□□□□ -1.67
CDK5RAP1Q96SZ6 AC018630.1-201ENST00000541376 925 ntBASIC4.6□□□□□ -1.67
CDK5RAP1Q96SZ6 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.6□□□□□ -1.67
CDK5RAP1Q96SZ6 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms