Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 RNU6-1155P-201ENST00000363554 107 ntBASIC3.03□□□□□ -1.92
RPRD1AQ96P16 SNORA9.2-201ENST00000365361 133 ntBASIC3.03□□□□□ -1.92
RPRD1AQ96P16 SNORD65.1-201ENST00000390889 71 ntBASIC3.03□□□□□ -1.92
RPRD1AQ96P16 SNORA40.4-201ENST00000390971 128 ntBASIC3.03□□□□□ -1.92
RPRD1AQ96P16 AL079342.2-201ENST00000403367 482 ntBASIC3.03□□□□□ -1.92
RPRD1AQ96P16 RNA5SP38-201ENST00000410750 119 ntBASIC3.03□□□□□ -1.92
RPRD1AQ96P16 DPRXP1-201ENST00000426312 460 ntBASIC3.03□□□□□ -1.92
RPRD1AQ96P16 OR2AS1P-201ENST00000427827 319 ntBASIC3.03□□□□□ -1.92
RPRD1AQ96P16 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
RPRD1AQ96P16 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.03□□□□□ -1.92
RPRD1AQ96P16 PTGES3P1-201ENST00000439531 483 ntBASIC3.03□□□□□ -1.92
RPRD1AQ96P16 USP9YP34-201ENST00000453983 808 ntBASIC3.03□□□□□ -1.92
RPRD1AQ96P16 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.03□□□□□ -1.92
RPRD1AQ96P16 AC093278.1-201ENST00000494700 600 ntBASIC3.03□□□□□ -1.92
RPRD1AQ96P16 AC083906.5-201ENST00000503722 328 ntBASIC3.03□□□□□ -1.92
RPRD1AQ96P16 DSTNP2-201ENST00000504533 515 ntBASIC3.03□□□□□ -1.92
RPRD1AQ96P16 RNU6-56P-201ENST00000516986 93 ntBASIC3.03□□□□□ -1.92
RPRD1AQ96P16 AC068339.2-201ENST00000534395 618 ntBASIC3.03□□□□□ -1.92
RPRD1AQ96P16 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.03□□□□□ -1.92
RPRD1AQ96P16 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.03□□□□□ -1.92
RPRD1AQ96P16 RPL23AP92-201ENST00000603609 255 ntBASIC3.03□□□□□ -1.92
RPRD1AQ96P16 AC106028.5-201ENST00000610332 395 ntBASIC3.03□□□□□ -1.92
RPRD1AQ96P16 AC004696.1-201ENST00000614345 607 ntBASIC3.03□□□□□ -1.92
RPRD1AQ96P16 AL138880.2-201ENST00000616214 239 ntBASIC3.03□□□□□ -1.92
RPRD1AQ96P16 MIR6076-201ENST00000617521 113 ntBASIC3.03□□□□□ -1.92
RPRD1AQ96P16 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.02□□□□□ -1.93
RPRD1AQ96P16 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.02□□□□□ -1.93
RPRD1AQ96P16 CUL1P1-201ENST00000509510 2425 ntBASIC3.02□□□□□ -1.93
RPRD1AQ96P16 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
RPRD1AQ96P16 RNU6-799P-201ENST00000363567 107 ntBASIC3.02□□□□□ -1.93
RPRD1AQ96P16 RNU6-878P-201ENST00000384578 110 ntBASIC3.02□□□□□ -1.93
RPRD1AQ96P16 RPL21P75-201ENST00000396599 483 ntBASIC3.02□□□□□ -1.93
RPRD1AQ96P16 RPL21P28-201ENST00000401418 483 ntBASIC3.02□□□□□ -1.93
RPRD1AQ96P16 AL592114.1-201ENST00000403842 483 ntBASIC3.02□□□□□ -1.93
RPRD1AQ96P16 RPL7P8-201ENST00000411964 730 ntBASIC3.02□□□□□ -1.93
RPRD1AQ96P16 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.02□□□□□ -1.93
RPRD1AQ96P16 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC3.02□□□□□ -1.93
RPRD1AQ96P16 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.02□□□□□ -1.93
RPRD1AQ96P16 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC3.02□□□□□ -1.93
RPRD1AQ96P16 MTCO1P3-201ENST00000429327 192 ntBASIC3.02□□□□□ -1.93
RPRD1AQ96P16 AC109583.1-201ENST00000432156 268 ntBASIC3.02□□□□□ -1.93
RPRD1AQ96P16 SEPT7P5-201ENST00000434048 306 ntBASIC3.02□□□□□ -1.93
RPRD1AQ96P16 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
RPRD1AQ96P16 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.02□□□□□ -1.93
RPRD1AQ96P16 COX6CP2-201ENST00000444980 225 ntBASIC3.02□□□□□ -1.93
RPRD1AQ96P16 AC079776.3-201ENST00000450665 370 ntBASIC3.02□□□□□ -1.93
RPRD1AQ96P16 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.02□□□□□ -1.93
RPRD1AQ96P16 RFC5P1-201ENST00000454419 874 ntBASIC3.02□□□□□ -1.93
RPRD1AQ96P16 OR6K1P-201ENST00000456766 971 ntBASIC3.02□□□□□ -1.93
RPRD1AQ96P16 RPL21P39-201ENST00000463605 483 ntBASIC3.02□□□□□ -1.93
RPRD1AQ96P16 AC011979.1-201ENST00000472300 483 ntBASIC3.02□□□□□ -1.93
RPRD1AQ96P16 RPS29P26-201ENST00000477483 171 ntBASIC3.02□□□□□ -1.93
RPRD1AQ96P16 RPL21P93-201ENST00000480465 489 ntBASIC3.02□□□□□ -1.93
RPRD1AQ96P16 AC233702.1-201ENST00000482905 502 ntBASIC3.02□□□□□ -1.93
RPRD1AQ96P16 AC087190.1-201ENST00000484462 480 ntBASIC3.02□□□□□ -1.93
RPRD1AQ96P16 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.02□□□□□ -1.93
RPRD1AQ96P16 AC093591.1-201ENST00000491435 481 ntBASIC3.02□□□□□ -1.93
RPRD1AQ96P16 RPL21P16-201ENST00000495531 483 ntBASIC3.02□□□□□ -1.93
RPRD1AQ96P16 AC010460.2-201ENST00000509054 677 ntBASIC3.02□□□□□ -1.93
RPRD1AQ96P16 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.02□□□□□ -1.93
RPRD1AQ96P16 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.02□□□□□ -1.93
RPRD1AQ96P16 OR5AK1P-201ENST00000524837 922 ntBASIC3.02□□□□□ -1.93
RPRD1AQ96P16 AP001189.2-201ENST00000527320 189 ntBASIC3.02□□□□□ -1.93
RPRD1AQ96P16 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.02□□□□□ -1.93
RPRD1AQ96P16 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.02□□□□□ -1.93
RPRD1AQ96P16 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.02□□□□□ -1.93
RPRD1AQ96P16 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.02□□□□□ -1.93
RPRD1AQ96P16 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC3.02□□□□□ -1.93
RPRD1AQ96P16 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.02□□□□□ -1.93
RPRD1AQ96P16 AC245036.5-201ENST00000596330 847 ntBASIC3.02□□□□□ -1.93
RPRD1AQ96P16 AC009570.1-201ENST00000609599 745 ntBASIC3.02□□□□□ -1.93
RPRD1AQ96P16 AL512427.1-201ENST00000618593 349 ntBASIC3.02□□□□□ -1.93
RPRD1AQ96P16 U6.101-201ENST00000637707 76 ntBASIC3.02□□□□□ -1.93
RPRD1AQ96P16 MKKS-204ENST00000639674 192 ntBASIC3.02□□□□□ -1.93
RPRD1AQ96P16 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.02□□□□□ -1.93
RPRD1AQ96P16 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
RPRD1AQ96P16 AL365361.1-201ENST00000566942 3481 ntBASIC3.02□□□□□ -1.93
RPRD1AQ96P16 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
RPRD1AQ96P16 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
RPRD1AQ96P16 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
RPRD1AQ96P16 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
RPRD1AQ96P16 CD24P4-201ENST00000382840 243 ntBASIC3.01□□□□□ -1.93
RPRD1AQ96P16 RNU6-1027P-201ENST00000383998 107 ntBASIC3.01□□□□□ -1.93
RPRD1AQ96P16 RNU6-851P-201ENST00000384565 107 ntBASIC3.01□□□□□ -1.93
RPRD1AQ96P16 AL136372.1-201ENST00000403060 228 ntBASIC3.01□□□□□ -1.93
RPRD1AQ96P16 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.01□□□□□ -1.93
RPRD1AQ96P16 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
RPRD1AQ96P16 SAR1AP4-201ENST00000429225 591 ntBASIC3.01□□□□□ -1.93
RPRD1AQ96P16 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC3.01□□□□□ -1.93
RPRD1AQ96P16 AP000949.1-201ENST00000438328 629 ntBASIC3.01□□□□□ -1.93
RPRD1AQ96P16 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.01□□□□□ -1.93
RPRD1AQ96P16 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
RPRD1AQ96P16 AL589880.1-201ENST00000448271 287 ntBASIC3.01□□□□□ -1.93
RPRD1AQ96P16 RPL37P4-201ENST00000448908 268 ntBASIC3.01□□□□□ -1.93
RPRD1AQ96P16 AL162389.1-201ENST00000449233 177 ntBASIC3.01□□□□□ -1.93
RPRD1AQ96P16 RNA5SP310-201ENST00000459084 116 ntBASIC3.01□□□□□ -1.93
RPRD1AQ96P16 AC010625.1-201ENST00000511296 403 ntBASIC3.01□□□□□ -1.93
RPRD1AQ96P16 RNU6-1261P-201ENST00000517194 104 ntBASIC3.01□□□□□ -1.93
RPRD1AQ96P16 NDUFS5P6-201ENST00000529136 295 ntBASIC3.01□□□□□ -1.93
RPRD1AQ96P16 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms