Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC3.35□□□□□ -1.87
ZNF560Q96MR9 RPL21P8-201ENST00000465083 535 ntBASIC3.35□□□□□ -1.87
ZNF560Q96MR9 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.35□□□□□ -1.87
ZNF560Q96MR9 AC023424.2-201ENST00000493479 777 ntBASIC3.35□□□□□ -1.87
ZNF560Q96MR9 MTCYBP17-201ENST00000503579 789 ntBASIC3.35□□□□□ -1.87
ZNF560Q96MR9 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.35□□□□□ -1.87
ZNF560Q96MR9 AC010374.2-201ENST00000512933 535 ntBASIC3.35□□□□□ -1.87
ZNF560Q96MR9 AC006499.2-201ENST00000513470 337 ntBASIC3.35□□□□□ -1.87
ZNF560Q96MR9 RNA5SP217-201ENST00000515959 91 ntBASIC3.35□□□□□ -1.87
ZNF560Q96MR9 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.35□□□□□ -1.87
ZNF560Q96MR9 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.35□□□□□ -1.87
ZNF560Q96MR9 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.35□□□□□ -1.87
ZNF560Q96MR9 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.35□□□□□ -1.87
ZNF560Q96MR9 MIR4509-3-201ENST00000578671 94 ntBASIC3.35□□□□□ -1.87
ZNF560Q96MR9 MIR4509-2-201ENST00000583920 94 ntBASIC3.35□□□□□ -1.87
ZNF560Q96MR9 BNIP3P11-201ENST00000603878 563 ntBASIC3.35□□□□□ -1.87
ZNF560Q96MR9 AC012443.1-201ENST00000605605 231 ntBASIC3.35□□□□□ -1.87
ZNF560Q96MR9 AL451074.6-201ENST00000608512 729 ntBASIC3.35□□□□□ -1.87
ZNF560Q96MR9 MIR4509-1-201ENST00000618224 94 ntBASIC3.35□□□□□ -1.87
ZNF560Q96MR9 AL596245.1-201ENST00000618994 362 ntBASIC3.35□□□□□ -1.87
ZNF560Q96MR9 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.35□□□□□ -1.87
ZNF560Q96MR9 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.35□□□□□ -1.87
ZNF560Q96MR9 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
ZNF560Q96MR9 AL353743.1-202ENST00000431724 1695 ntBASIC3.35□□□□□ -1.87
ZNF560Q96MR9 MTND5P27-201ENST00000428871 1720 ntBASIC3.35□□□□□ -1.87
ZNF560Q96MR9 AC090740.1-201ENST00000623193 2262 ntBASIC3.35□□□□□ -1.87
ZNF560Q96MR9 TAB3P1-202ENST00000452645 1634 ntBASIC3.34□□□□□ -1.87
ZNF560Q96MR9 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.34□□□□□ -1.87
ZNF560Q96MR9 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.34□□□□□ -1.87
ZNF560Q96MR9 RNU6-805P-201ENST00000365643 106 ntBASIC3.34□□□□□ -1.87
ZNF560Q96MR9 RNU6-882P-201ENST00000391025 103 ntBASIC3.34□□□□□ -1.87
ZNF560Q96MR9 HMGB3P23-201ENST00000414981 585 ntBASIC3.34□□□□□ -1.87
ZNF560Q96MR9 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.34□□□□□ -1.87
ZNF560Q96MR9 AL356320.2-201ENST00000417263 507 ntBASIC3.34□□□□□ -1.87
ZNF560Q96MR9 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.34□□□□□ -1.87
ZNF560Q96MR9 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.34□□□□□ -1.87
ZNF560Q96MR9 EEF1A1P39-201ENST00000440791 250 ntBASIC3.34□□□□□ -1.87
ZNF560Q96MR9 OR10R1P-201ENST00000441524 1141 ntBASIC3.34□□□□□ -1.87
ZNF560Q96MR9 AL121871.1-201ENST00000443413 436 ntBASIC3.34□□□□□ -1.87
ZNF560Q96MR9 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.34□□□□□ -1.87
ZNF560Q96MR9 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.34□□□□□ -1.87
ZNF560Q96MR9 AC091179.1-201ENST00000461606 579 ntBASIC3.34□□□□□ -1.87
ZNF560Q96MR9 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.34□□□□□ -1.87
ZNF560Q96MR9 RNA5SP341-201ENST00000516261 117 ntBASIC3.34□□□□□ -1.87
ZNF560Q96MR9 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
ZNF560Q96MR9 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
ZNF560Q96MR9 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.34□□□□□ -1.87
ZNF560Q96MR9 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.34□□□□□ -1.87
ZNF560Q96MR9 AC005951.1-201ENST00000576706 485 ntBASIC3.34□□□□□ -1.87
ZNF560Q96MR9 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.34□□□□□ -1.87
ZNF560Q96MR9 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.34□□□□□ -1.87
ZNF560Q96MR9 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.34□□□□□ -1.87
ZNF560Q96MR9 AC004987.4-201ENST00000603383 338 ntBASIC3.34□□□□□ -1.87
ZNF560Q96MR9 AL160237.3-201ENST00000604114 1013 ntBASIC3.34□□□□□ -1.87
ZNF560Q96MR9 AL136370.1-201ENST00000608166 691 ntBASIC3.34□□□□□ -1.87
ZNF560Q96MR9 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.34□□□□□ -1.87
ZNF560Q96MR9 AL162274.2-201ENST00000614406 332 ntBASIC3.34□□□□□ -1.87
ZNF560Q96MR9 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.34□□□□□ -1.87
ZNF560Q96MR9 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
ZNF560Q96MR9 AL513185.3-201ENST00000433335 1300 ntBASIC3.34□□□□□ -1.87
ZNF560Q96MR9 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
ZNF560Q96MR9 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.34□□□□□ -1.88
ZNF560Q96MR9 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.34□□□□□ -1.88
ZNF560Q96MR9 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.34□□□□□ -1.88
ZNF560Q96MR9 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.34□□□□□ -1.88
ZNF560Q96MR9 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
ZNF560Q96MR9 MAPK10-362ENST00000641864 4484 ntBASIC3.33□□□□□ -1.88
ZNF560Q96MR9 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.33□□□□□ -1.88
ZNF560Q96MR9 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.33□□□□□ -1.88
ZNF560Q96MR9 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
ZNF560Q96MR9 MIR422A-201ENST00000362286 90 ntBASIC3.33□□□□□ -1.88
ZNF560Q96MR9 AL138885.1-201ENST00000405921 675 ntBASIC3.33□□□□□ -1.88
ZNF560Q96MR9 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
ZNF560Q96MR9 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.33□□□□□ -1.88
ZNF560Q96MR9 SNRPEP4-201ENST00000435815 279 ntBASIC3.33□□□□□ -1.88
ZNF560Q96MR9 HIGD1AP11-201ENST00000438361 280 ntBASIC3.33□□□□□ -1.88
ZNF560Q96MR9 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.33□□□□□ -1.88
ZNF560Q96MR9 RPL17P49-201ENST00000443728 411 ntBASIC3.33□□□□□ -1.88
ZNF560Q96MR9 OR6K5P-201ENST00000447050 945 ntBASIC3.33□□□□□ -1.88
ZNF560Q96MR9 ARPC3P5-201ENST00000448802 534 ntBASIC3.33□□□□□ -1.88
ZNF560Q96MR9 AC125238.1-201ENST00000448842 249 ntBASIC3.33□□□□□ -1.88
ZNF560Q96MR9 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.33□□□□□ -1.88
ZNF560Q96MR9 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.33□□□□□ -1.88
ZNF560Q96MR9 XKRY-201ENST00000510392 1100 ntBASIC3.33□□□□□ -1.88
ZNF560Q96MR9 RN7SKP272-201ENST00000516988 232 ntBASIC3.33□□□□□ -1.88
ZNF560Q96MR9 PSMA2P1-201ENST00000526365 646 ntBASIC3.33□□□□□ -1.88
ZNF560Q96MR9 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.33□□□□□ -1.88
ZNF560Q96MR9 AP002404.1-201ENST00000532005 451 ntBASIC3.33□□□□□ -1.88
ZNF560Q96MR9 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.33□□□□□ -1.88
ZNF560Q96MR9 TRAV37-201ENST00000553906 342 ntBASIC3.33□□□□□ -1.88
ZNF560Q96MR9 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.33□□□□□ -1.88
ZNF560Q96MR9 AP005205.1-201ENST00000563503 508 ntBASIC3.33□□□□□ -1.88
ZNF560Q96MR9 OR4K7P-201ENST00000580232 945 ntBASIC3.33□□□□□ -1.88
ZNF560Q96MR9 COX6CP3-201ENST00000580869 223 ntBASIC3.33□□□□□ -1.88
ZNF560Q96MR9 DUXAP11-201ENST00000603858 526 ntBASIC3.33□□□□□ -1.88
ZNF560Q96MR9 AC004853.1-201ENST00000604902 698 ntBASIC3.33□□□□□ -1.88
ZNF560Q96MR9 AL133445.2-201ENST00000611191 527 ntBASIC3.33□□□□□ -1.88
ZNF560Q96MR9 AC109809.1-201ENST00000619665 545 ntBASIC3.33□□□□□ -1.88
ZNF560Q96MR9 CRYM-AS1-204ENST00000637983 556 ntBASIC3.33□□□□□ -1.88
ZNF560Q96MR9 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms