Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 SNORA5A-201ENST00000384111 134 ntBASIC3.13□□□□□ -1.91
PKNOX2Q96KN3 SNORD65C-201ENST00000390962 71 ntBASIC3.13□□□□□ -1.91
PKNOX2Q96KN3 AC110754.1-201ENST00000399740 601 ntBASIC3.13□□□□□ -1.91
PKNOX2Q96KN3 SNORD23.1-201ENST00000408212 104 ntBASIC3.13□□□□□ -1.91
PKNOX2Q96KN3 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.13□□□□□ -1.91
PKNOX2Q96KN3 AC063979.1-201ENST00000415539 377 ntBASIC3.13□□□□□ -1.91
PKNOX2Q96KN3 HSFY4P-201ENST00000415994 1181 ntBASIC3.13□□□□□ -1.91
PKNOX2Q96KN3 AC004975.1-201ENST00000428733 208 ntBASIC3.13□□□□□ -1.91
PKNOX2Q96KN3 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.13□□□□□ -1.91
PKNOX2Q96KN3 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.13□□□□□ -1.91
PKNOX2Q96KN3 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.13□□□□□ -1.91
PKNOX2Q96KN3 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.13□□□□□ -1.91
PKNOX2Q96KN3 GPM6BP3-201ENST00000442797 145 ntBASIC3.13□□□□□ -1.91
PKNOX2Q96KN3 AL096803.2-201ENST00000450032 677 ntBASIC3.13□□□□□ -1.91
PKNOX2Q96KN3 AC104073.1-201ENST00000451988 151 ntBASIC3.13□□□□□ -1.91
PKNOX2Q96KN3 AC090515.1-201ENST00000465295 476 ntBASIC3.13□□□□□ -1.91
PKNOX2Q96KN3 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.13□□□□□ -1.91
PKNOX2Q96KN3 AC027338.1-201ENST00000514840 825 ntBASIC3.13□□□□□ -1.91
PKNOX2Q96KN3 SNORA9.3-201ENST00000516383 129 ntBASIC3.13□□□□□ -1.91
PKNOX2Q96KN3 DEFB108D-201ENST00000527787 222 ntBASIC3.13□□□□□ -1.91
PKNOX2Q96KN3 EEF1B2P4-201ENST00000551398 348 ntBASIC3.13□□□□□ -1.91
PKNOX2Q96KN3 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PKNOX2Q96KN3 MIR5004-201ENST00000579078 107 ntBASIC3.13□□□□□ -1.91
PKNOX2Q96KN3 RN7SL622P-201ENST00000585292 275 ntBASIC3.13□□□□□ -1.91
PKNOX2Q96KN3 AC011471.1-201ENST00000585766 187 ntBASIC3.13□□□□□ -1.91
PKNOX2Q96KN3 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.13□□□□□ -1.91
PKNOX2Q96KN3 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.13□□□□□ -1.91
PKNOX2Q96KN3 AC100793.4-201ENST00000613683 429 ntBASIC3.13□□□□□ -1.91
PKNOX2Q96KN3 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.13□□□□□ -1.91
PKNOX2Q96KN3 AC009093.8-201ENST00000641769 292 ntBASIC3.13□□□□□ -1.91
PKNOX2Q96KN3 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PKNOX2Q96KN3 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC3.13□□□□□ -1.91
PKNOX2Q96KN3 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PKNOX2Q96KN3 AC005336.3-201ENST00000623833 2679 ntBASIC3.13□□□□□ -1.91
PKNOX2Q96KN3 DDX10P1-201ENST00000448545 1933 ntBASIC3.13□□□□□ -1.91
PKNOX2Q96KN3 MTND5P31-201ENST00000419366 1374 ntBASIC3.12□□□□□ -1.91
PKNOX2Q96KN3 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
PKNOX2Q96KN3 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
PKNOX2Q96KN3 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PKNOX2Q96KN3 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PKNOX2Q96KN3 AC234772.1-201ENST00000377927 937 ntBASIC3.12□□□□□ -1.91
PKNOX2Q96KN3 MIR649-201ENST00000384843 97 ntBASIC3.12□□□□□ -1.91
PKNOX2Q96KN3 SYF2P2-201ENST00000417620 583 ntBASIC3.12□□□□□ -1.91
PKNOX2Q96KN3 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.12□□□□□ -1.91
PKNOX2Q96KN3 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.12□□□□□ -1.91
PKNOX2Q96KN3 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.12□□□□□ -1.91
PKNOX2Q96KN3 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.12□□□□□ -1.91
PKNOX2Q96KN3 MTCYBP3-201ENST00000445588 1137 ntBASIC3.12□□□□□ -1.91
PKNOX2Q96KN3 PSPHP1-201ENST00000450062 261 ntBASIC3.12□□□□□ -1.91
PKNOX2Q96KN3 AC104164.3-201ENST00000467363 1258 ntBASIC3.12□□□□□ -1.91
PKNOX2Q96KN3 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.12□□□□□ -1.91
PKNOX2Q96KN3 AC110794.1-201ENST00000505816 425 ntBASIC3.12□□□□□ -1.91
PKNOX2Q96KN3 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.12□□□□□ -1.91
PKNOX2Q96KN3 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.12□□□□□ -1.91
PKNOX2Q96KN3 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PKNOX2Q96KN3 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.12□□□□□ -1.91
PKNOX2Q96KN3 RPL21P12-201ENST00000559810 515 ntBASIC3.12□□□□□ -1.91
PKNOX2Q96KN3 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.12□□□□□ -1.91
PKNOX2Q96KN3 AC074051.3-201ENST00000570238 358 ntBASIC3.12□□□□□ -1.91
PKNOX2Q96KN3 ZNF415P1-201ENST00000582279 1166 ntBASIC3.12□□□□□ -1.91
PKNOX2Q96KN3 MIR4697-201ENST00000582977 78 ntBASIC3.12□□□□□ -1.91
PKNOX2Q96KN3 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.12□□□□□ -1.91
PKNOX2Q96KN3 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.12□□□□□ -1.91
PKNOX2Q96KN3 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.12□□□□□ -1.91
PKNOX2Q96KN3 MTCO1P4-201ENST00000520516 1409 ntBASIC3.11□□□□□ -1.91
PKNOX2Q96KN3 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PKNOX2Q96KN3 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.11□□□□□ -1.91
PKNOX2Q96KN3 AP002784.2-201ENST00000397300 549 ntBASIC3.11□□□□□ -1.91
PKNOX2Q96KN3 PTGES3P2-201ENST00000407942 482 ntBASIC3.11□□□□□ -1.91
PKNOX2Q96KN3 RN7SKP263-201ENST00000411194 309 ntBASIC3.11□□□□□ -1.91
PKNOX2Q96KN3 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.11□□□□□ -1.91
PKNOX2Q96KN3 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.11□□□□□ -1.91
PKNOX2Q96KN3 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.11□□□□□ -1.91
PKNOX2Q96KN3 AC108734.1-201ENST00000439549 399 ntBASIC3.11□□□□□ -1.91
PKNOX2Q96KN3 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC3.11□□□□□ -1.91
PKNOX2Q96KN3 AC002542.1-201ENST00000440683 193 ntBASIC3.11□□□□□ -1.91
PKNOX2Q96KN3 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.11□□□□□ -1.91
PKNOX2Q96KN3 ANKRD26P4-201ENST00000455755 950 ntBASIC3.11□□□□□ -1.91
PKNOX2Q96KN3 RNA5SP233-201ENST00000459153 113 ntBASIC3.11□□□□□ -1.91
PKNOX2Q96KN3 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC3.11□□□□□ -1.91
PKNOX2Q96KN3 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.11□□□□□ -1.91
PKNOX2Q96KN3 RN7SL20P-201ENST00000488827 297 ntBASIC3.11□□□□□ -1.91
PKNOX2Q96KN3 AC112518.2-201ENST00000508565 425 ntBASIC3.11□□□□□ -1.91
PKNOX2Q96KN3 AC121161.1-201ENST00000510606 652 ntBASIC3.11□□□□□ -1.91
PKNOX2Q96KN3 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.11□□□□□ -1.91
PKNOX2Q96KN3 AC022634.1-201ENST00000520765 532 ntBASIC3.11□□□□□ -1.91
PKNOX2Q96KN3 OR5B10P-201ENST00000532869 642 ntBASIC3.11□□□□□ -1.91
PKNOX2Q96KN3 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
PKNOX2Q96KN3 AC011611.5-201ENST00000552477 578 ntBASIC3.11□□□□□ -1.91
PKNOX2Q96KN3 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.11□□□□□ -1.91
PKNOX2Q96KN3 AC124283.4-201ENST00000581815 456 ntBASIC3.11□□□□□ -1.91
PKNOX2Q96KN3 AC012669.1-201ENST00000603209 283 ntBASIC3.11□□□□□ -1.91
PKNOX2Q96KN3 AL031601.2-202ENST00000622650 282 ntBASIC3.11□□□□□ -1.91
PKNOX2Q96KN3 AC243312.2-201ENST00000623340 601 ntBASIC3.11□□□□□ -1.91
PKNOX2Q96KN3 AC106730.3-201ENST00000624568 641 ntBASIC3.11□□□□□ -1.91
PKNOX2Q96KN3 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.11□□□□□ -1.91
PKNOX2Q96KN3 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.11□□□□□ -1.91
PKNOX2Q96KN3 FRG1BP-201ENST00000278882 761 ntBASIC3.1□□□□□ -1.91
PKNOX2Q96KN3 SNORD15B-201ENST00000384714 146 ntBASIC3.1□□□□□ -1.91
PKNOX2Q96KN3 HMGN1P24-201ENST00000412282 298 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms