Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 AC092470.1-201ENST00000546187 132 ntBASIC3.24□□□□□ -1.89
USP47Q96K76 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.24□□□□□ -1.89
USP47Q96K76 AC078814.3-201ENST00000553036 491 ntBASIC3.24□□□□□ -1.89
USP47Q96K76 MIR3690-201ENST00000580266 75 ntBASIC3.24□□□□□ -1.89
USP47Q96K76 MAGOH2P-202ENST00000584384 429 ntBASIC3.24□□□□□ -1.89
USP47Q96K76 TPMTP1-201ENST00000592307 737 ntBASIC3.24□□□□□ -1.89
USP47Q96K76 AL356575.1-201ENST00000603008 283 ntBASIC3.24□□□□□ -1.89
USP47Q96K76 AL627309.6-201ENST00000606857 840 ntBASIC3.24□□□□□ -1.89
USP47Q96K76 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.24□□□□□ -1.89
USP47Q96K76 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
USP47Q96K76 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
USP47Q96K76 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
USP47Q96K76 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
USP47Q96K76 RNU6-374P-201ENST00000364146 108 ntBASIC3.23□□□□□ -1.89
USP47Q96K76 MT-TC-201ENST00000387405 66 ntBASIC3.23□□□□□ -1.89
USP47Q96K76 SSXP10-201ENST00000402595 565 ntBASIC3.23□□□□□ -1.89
USP47Q96K76 AL354719.1-201ENST00000406535 843 ntBASIC3.23□□□□□ -1.89
USP47Q96K76 AL158050.1-201ENST00000416077 457 ntBASIC3.23□□□□□ -1.89
USP47Q96K76 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.23□□□□□ -1.89
USP47Q96K76 AL121882.1-201ENST00000422893 417 ntBASIC3.23□□□□□ -1.89
USP47Q96K76 AC114973.1-201ENST00000429057 632 ntBASIC3.23□□□□□ -1.89
USP47Q96K76 HMGN2P3-201ENST00000433603 273 ntBASIC3.23□□□□□ -1.89
USP47Q96K76 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.23□□□□□ -1.89
USP47Q96K76 HMGN2P5-201ENST00000436882 273 ntBASIC3.23□□□□□ -1.89
USP47Q96K76 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.23□□□□□ -1.89
USP47Q96K76 AL929288.2-201ENST00000446368 407 ntBASIC3.23□□□□□ -1.89
USP47Q96K76 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.23□□□□□ -1.89
USP47Q96K76 RPS4XP6-201ENST00000477670 797 ntBASIC3.23□□□□□ -1.89
USP47Q96K76 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.23□□□□□ -1.89
USP47Q96K76 AC025768.1-201ENST00000510057 267 ntBASIC3.23□□□□□ -1.89
USP47Q96K76 AC104057.1-201ENST00000515547 497 ntBASIC3.23□□□□□ -1.89
USP47Q96K76 RNU6ATAC9P-201ENST00000516210 116 ntBASIC3.23□□□□□ -1.89
USP47Q96K76 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.23□□□□□ -1.89
USP47Q96K76 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.23□□□□□ -1.89
USP47Q96K76 AC023824.3-201ENST00000569003 562 ntBASIC3.23□□□□□ -1.89
USP47Q96K76 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.23□□□□□ -1.89
USP47Q96K76 VN1R9P-201ENST00000614184 867 ntBASIC3.23□□□□□ -1.89
USP47Q96K76 AC010297.1-201ENST00000623948 149 ntBASIC3.23□□□□□ -1.89
USP47Q96K76 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.23□□□□□ -1.89
USP47Q96K76 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.23□□□□□ -1.89
USP47Q96K76 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
USP47Q96K76 MTCO1P6-201ENST00000481192 1384 ntBASIC3.22□□□□□ -1.89
USP47Q96K76 MTND5P7-201ENST00000413558 1798 ntBASIC3.22□□□□□ -1.89
USP47Q96K76 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.22□□□□□ -1.89
USP47Q96K76 RNU6-263P-201ENST00000363811 107 ntBASIC3.22□□□□□ -1.89
USP47Q96K76 SNORA51.2-201ENST00000364595 132 ntBASIC3.22□□□□□ -1.89
USP47Q96K76 RNU6-441P-201ENST00000384545 106 ntBASIC3.22□□□□□ -1.89
USP47Q96K76 RNU6-482P-201ENST00000391068 107 ntBASIC3.22□□□□□ -1.89
USP47Q96K76 AL121972.1-201ENST00000402023 252 ntBASIC3.22□□□□□ -1.89
USP47Q96K76 RNU4-78P-201ENST00000410940 126 ntBASIC3.22□□□□□ -1.89
USP47Q96K76 RPS3AP9-201ENST00000417027 792 ntBASIC3.22□□□□□ -1.89
USP47Q96K76 AL512661.1-201ENST00000434586 1253 ntBASIC3.22□□□□□ -1.89
USP47Q96K76 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC3.22□□□□□ -1.89
USP47Q96K76 HMGN1P5-201ENST00000448591 263 ntBASIC3.22□□□□□ -1.89
USP47Q96K76 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.22□□□□□ -1.89
USP47Q96K76 AC008571.1-201ENST00000467232 300 ntBASIC3.22□□□□□ -1.89
USP47Q96K76 RPL21P47-201ENST00000483696 477 ntBASIC3.22□□□□□ -1.89
USP47Q96K76 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC3.22□□□□□ -1.89
USP47Q96K76 RNU6-416P-201ENST00000516265 103 ntBASIC3.22□□□□□ -1.89
USP47Q96K76 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.22□□□□□ -1.89
USP47Q96K76 AC078899.3-201ENST00000599065 212 ntBASIC3.22□□□□□ -1.89
USP47Q96K76 AL671309.1-201ENST00000603750 544 ntBASIC3.22□□□□□ -1.89
USP47Q96K76 AC016542.1-201ENST00000608259 493 ntBASIC3.22□□□□□ -1.89
USP47Q96K76 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.21□□□□□ -1.9
USP47Q96K76 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
USP47Q96K76 MIR16-2-201ENST00000362117 81 ntBASIC3.21□□□□□ -1.9
USP47Q96K76 OR5H15-201ENST00000383696 930 ntBASIC3.21□□□□□ -1.9
USP47Q96K76 RNU6-444P-201ENST00000383988 108 ntBASIC3.21□□□□□ -1.9
USP47Q96K76 RNU6-481P-201ENST00000384194 107 ntBASIC3.21□□□□□ -1.9
USP47Q96K76 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.21□□□□□ -1.9
USP47Q96K76 OFD1P18Y-201ENST00000420889 959 ntBASIC3.21□□□□□ -1.9
USP47Q96K76 AL009174.1-201ENST00000426577 416 ntBASIC3.21□□□□□ -1.9
USP47Q96K76 AL603825.1-201ENST00000438481 80 ntBASIC3.21□□□□□ -1.9
USP47Q96K76 HMGB1P18-201ENST00000438801 619 ntBASIC3.21□□□□□ -1.9
USP47Q96K76 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.21□□□□□ -1.9
USP47Q96K76 AC104058.1-201ENST00000448028 297 ntBASIC3.21□□□□□ -1.9
USP47Q96K76 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC3.21□□□□□ -1.9
USP47Q96K76 NF1P3-201ENST00000457709 450 ntBASIC3.21□□□□□ -1.9
USP47Q96K76 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.21□□□□□ -1.9
USP47Q96K76 RNU6-1073P-201ENST00000517182 106 ntBASIC3.21□□□□□ -1.9
USP47Q96K76 IGJP1-201ENST00000522682 475 ntBASIC3.21□□□□□ -1.9
USP47Q96K76 SNRPGP1-201ENST00000553864 222 ntBASIC3.21□□□□□ -1.9
USP47Q96K76 YWHAZP1-201ENST00000556286 722 ntBASIC3.21□□□□□ -1.9
USP47Q96K76 AC105137.2-201ENST00000569073 466 ntBASIC3.21□□□□□ -1.9
USP47Q96K76 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.21□□□□□ -1.9
USP47Q96K76 AL137847.3-201ENST00000611521 109 ntBASIC3.21□□□□□ -1.9
USP47Q96K76 AL118556.2-201ENST00000614375 824 ntBASIC3.21□□□□□ -1.9
USP47Q96K76 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.21□□□□□ -1.9
USP47Q96K76 AL445493.3-201ENST00000619568 477 ntBASIC3.21□□□□□ -1.9
USP47Q96K76 AC106730.3-201ENST00000624568 641 ntBASIC3.21□□□□□ -1.9
USP47Q96K76 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC3.21□□□□□ -1.9
USP47Q96K76 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.21□□□□□ -1.9
USP47Q96K76 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.21□□□□□ -1.9
USP47Q96K76 Z99496.1-201ENST00000469424 1477 ntBASIC3.21□□□□□ -1.9
USP47Q96K76 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
USP47Q96K76 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.2□□□□□ -1.9
USP47Q96K76 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
USP47Q96K76 AC107081.1-201ENST00000414975 361 ntBASIC3.2□□□□□ -1.9
USP47Q96K76 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.2□□□□□ -1.9
USP47Q96K76 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms