Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM11Q96F44 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.57□□□□□ -1.52
TRIM11Q96F44 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM11Q96F44 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM11Q96F44 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM11Q96F44 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM11Q96F44 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM11Q96F44 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM11Q96F44 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC5.57□□□□□ -1.52
TRIM11Q96F44 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM11Q96F44 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM11Q96F44 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.56□□□□□ -1.52
TRIM11Q96F44 AL049555.1-201ENST00000562834 1933 ntBASIC5.56□□□□□ -1.52
TRIM11Q96F44 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
TRIM11Q96F44 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM11Q96F44 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM11Q96F44 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.56□□□□□ -1.52
TRIM11Q96F44 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.56□□□□□ -1.52
TRIM11Q96F44 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
TRIM11Q96F44 Y_RNA.64-201ENST00000362845 102 ntBASIC5.56□□□□□ -1.52
TRIM11Q96F44 Y_RNA.297-201ENST00000364950 91 ntBASIC5.56□□□□□ -1.52
TRIM11Q96F44 SNORD115-7-201ENST00000365306 82 ntBASIC5.56□□□□□ -1.52
TRIM11Q96F44 RNU6-338P-201ENST00000383888 105 ntBASIC5.56□□□□□ -1.52
TRIM11Q96F44 SNORA51.6-201ENST00000384151 125 ntBASIC5.56□□□□□ -1.52
TRIM11Q96F44 RNU6-378P-201ENST00000384324 107 ntBASIC5.56□□□□□ -1.52
TRIM11Q96F44 RNU6-921P-201ENST00000384361 107 ntBASIC5.56□□□□□ -1.52
TRIM11Q96F44 RNA5SP339-201ENST00000390987 122 ntBASIC5.56□□□□□ -1.52
TRIM11Q96F44 AL583834.1-201ENST00000406943 343 ntBASIC5.56□□□□□ -1.52
TRIM11Q96F44 AL139095.3-201ENST00000419672 1203 ntBASIC5.56□□□□□ -1.52
TRIM11Q96F44 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.56□□□□□ -1.52
TRIM11Q96F44 AC079807.1-201ENST00000429993 481 ntBASIC5.56□□□□□ -1.52
TRIM11Q96F44 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.56□□□□□ -1.52
TRIM11Q96F44 FHP1-201ENST00000442741 703 ntBASIC5.56□□□□□ -1.52
TRIM11Q96F44 AC005297.2-201ENST00000450430 606 ntBASIC5.56□□□□□ -1.52
TRIM11Q96F44 RPL10P17-201ENST00000453852 316 ntBASIC5.56□□□□□ -1.52
TRIM11Q96F44 AC245028.2-201ENST00000458673 253 ntBASIC5.56□□□□□ -1.52
TRIM11Q96F44 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
TRIM11Q96F44 COX6B1P2-201ENST00000489624 230 ntBASIC5.56□□□□□ -1.52
TRIM11Q96F44 AC093852.1-201ENST00000503587 266 ntBASIC5.56□□□□□ -1.52
TRIM11Q96F44 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC5.56□□□□□ -1.52
TRIM11Q96F44 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC5.56□□□□□ -1.52
TRIM11Q96F44 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.56□□□□□ -1.52
TRIM11Q96F44 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.56□□□□□ -1.52
TRIM11Q96F44 IL7-206ENST00000520269 456 ntTSL 3 BASIC5.56□□□□□ -1.52
TRIM11Q96F44 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC5.56□□□□□ -1.52
TRIM11Q96F44 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM11Q96F44 AC011494.1-201ENST00000596454 237 ntBASIC5.56□□□□□ -1.52
TRIM11Q96F44 AC104763.2-201ENST00000604179 382 ntBASIC5.56□□□□□ -1.52
TRIM11Q96F44 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM11Q96F44 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC5.56□□□□□ -1.52
TRIM11Q96F44 AC022467.1-201ENST00000614738 749 ntBASIC5.56□□□□□ -1.52
TRIM11Q96F44 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.56□□□□□ -1.52
TRIM11Q96F44 AP000843.1-201ENST00000624880 701 ntBASIC5.56□□□□□ -1.52
TRIM11Q96F44 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM11Q96F44 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.56□□□□□ -1.52
TRIM11Q96F44 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.56□□□□□ -1.52
TRIM11Q96F44 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.55□□□□□ -1.52
TRIM11Q96F44 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TRIM11Q96F44 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
TRIM11Q96F44 PABPC1P7-201ENST00000413177 1513 ntBASIC5.55□□□□□ -1.52
TRIM11Q96F44 AC009902.3-201ENST00000606235 2172 ntBASIC5.55□□□□□ -1.52
TRIM11Q96F44 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
TRIM11Q96F44 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.55□□□□□ -1.52
TRIM11Q96F44 Y_RNA.2-201ENST00000362330 96 ntBASIC5.55□□□□□ -1.52
TRIM11Q96F44 Y_RNA.26-201ENST00000362539 101 ntBASIC5.55□□□□□ -1.52
TRIM11Q96F44 RNU6-1287P-201ENST00000362914 107 ntBASIC5.55□□□□□ -1.52
TRIM11Q96F44 RNU6-1060P-201ENST00000384664 107 ntBASIC5.55□□□□□ -1.52
TRIM11Q96F44 AC016769.3-201ENST00000396562 315 ntBASIC5.55□□□□□ -1.52
TRIM11Q96F44 AP000580.1-201ENST00000404439 358 ntBASIC5.55□□□□□ -1.52
TRIM11Q96F44 RNA5SP178-201ENST00000410380 128 ntBASIC5.55□□□□□ -1.52
TRIM11Q96F44 RNU2-14P-201ENST00000411053 191 ntBASIC5.55□□□□□ -1.52
TRIM11Q96F44 UBE2FP1-201ENST00000416536 447 ntBASIC5.55□□□□□ -1.52
TRIM11Q96F44 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.55□□□□□ -1.52
TRIM11Q96F44 RPS29P14-201ENST00000431518 171 ntBASIC5.55□□□□□ -1.52
TRIM11Q96F44 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC5.55□□□□□ -1.52
TRIM11Q96F44 AP000281.1-201ENST00000444036 316 ntBASIC5.55□□□□□ -1.52
TRIM11Q96F44 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.55□□□□□ -1.52
TRIM11Q96F44 RN7SL809P-201ENST00000482040 297 ntBASIC5.55□□□□□ -1.52
TRIM11Q96F44 AC108860.1-201ENST00000484521 383 ntBASIC5.55□□□□□ -1.52
TRIM11Q96F44 PPIAP19-201ENST00000486414 492 ntBASIC5.55□□□□□ -1.52
TRIM11Q96F44 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC5.55□□□□□ -1.52
TRIM11Q96F44 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC5.55□□□□□ -1.52
TRIM11Q96F44 AP001922.4-201ENST00000526967 290 ntBASIC5.55□□□□□ -1.52
TRIM11Q96F44 SUB1P3-201ENST00000564581 315 ntBASIC5.55□□□□□ -1.52
TRIM11Q96F44 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC5.55□□□□□ -1.52
TRIM11Q96F44 AC118658.2-201ENST00000618697 459 ntBASIC5.55□□□□□ -1.52
TRIM11Q96F44 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC5.55□□□□□ -1.52
TRIM11Q96F44 AC025034.2-201ENST00000623264 286 ntBASIC5.55□□□□□ -1.52
TRIM11Q96F44 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.55□□□□□ -1.52
TRIM11Q96F44 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.55□□□□□ -1.52
TRIM11Q96F44 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.55□□□□□ -1.52
TRIM11Q96F44 AL034549.2-201ENST00000618285 3373 ntBASIC5.55□□□□□ -1.52
TRIM11Q96F44 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM11Q96F44 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM11Q96F44 AC092747.4-201ENST00000620519 1861 ntBASIC5.54□□□□□ -1.52
TRIM11Q96F44 RNU6-511P-201ENST00000363496 107 ntBASIC5.54□□□□□ -1.52
TRIM11Q96F44 SNORD27-201ENST00000363981 72 ntBASIC5.54□□□□□ -1.52
TRIM11Q96F44 Y_RNA.274-201ENST00000364714 101 ntBASIC5.54□□□□□ -1.52
TRIM11Q96F44 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
TRIM11Q96F44 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms