Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.95□□□□□ -1.78
CTHRC1Q96CG8 MRPL50P2-201ENST00000416821 482 ntBASIC3.95□□□□□ -1.78
CTHRC1Q96CG8 AL109913.1-201ENST00000421173 514 ntBASIC3.95□□□□□ -1.78
CTHRC1Q96CG8 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.95□□□□□ -1.78
CTHRC1Q96CG8 RSL24D1P6-201ENST00000426934 401 ntBASIC3.95□□□□□ -1.78
CTHRC1Q96CG8 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.95□□□□□ -1.78
CTHRC1Q96CG8 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.95□□□□□ -1.78
CTHRC1Q96CG8 RPS17P13-201ENST00000448974 407 ntBASIC3.95□□□□□ -1.78
CTHRC1Q96CG8 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.95□□□□□ -1.78
CTHRC1Q96CG8 AC109327.1-201ENST00000471666 403 ntBASIC3.95□□□□□ -1.78
CTHRC1Q96CG8 RPL36AP51-201ENST00000487216 318 ntBASIC3.95□□□□□ -1.78
CTHRC1Q96CG8 AC091167.1-201ENST00000492017 396 ntBASIC3.95□□□□□ -1.78
CTHRC1Q96CG8 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.95□□□□□ -1.78
CTHRC1Q96CG8 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.95□□□□□ -1.78
CTHRC1Q96CG8 AC006499.6-201ENST00000511169 607 ntBASIC3.95□□□□□ -1.78
CTHRC1Q96CG8 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.95□□□□□ -1.78
CTHRC1Q96CG8 RNA5SP519-201ENST00000516480 119 ntBASIC3.95□□□□□ -1.78
CTHRC1Q96CG8 RNU6-410P-201ENST00000517006 107 ntBASIC3.95□□□□□ -1.78
CTHRC1Q96CG8 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.95□□□□□ -1.78
CTHRC1Q96CG8 AC090572.1-201ENST00000519251 160 ntBASIC3.95□□□□□ -1.78
CTHRC1Q96CG8 AC090281.1-201ENST00000523019 276 ntBASIC3.95□□□□□ -1.78
CTHRC1Q96CG8 AC104383.1-201ENST00000530297 370 ntBASIC3.95□□□□□ -1.78
CTHRC1Q96CG8 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.95□□□□□ -1.78
CTHRC1Q96CG8 AL133271.1-201ENST00000538229 291 ntBASIC3.95□□□□□ -1.78
CTHRC1Q96CG8 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CTHRC1Q96CG8 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.95□□□□□ -1.78
CTHRC1Q96CG8 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.95□□□□□ -1.78
CTHRC1Q96CG8 OR4T1P-201ENST00000554933 911 ntBASIC3.95□□□□□ -1.78
CTHRC1Q96CG8 AP005205.1-201ENST00000563503 508 ntBASIC3.95□□□□□ -1.78
CTHRC1Q96CG8 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.95□□□□□ -1.78
CTHRC1Q96CG8 AL161729.3-201ENST00000603533 673 ntBASIC3.95□□□□□ -1.78
CTHRC1Q96CG8 AC007621.1-201ENST00000604544 437 ntBASIC3.95□□□□□ -1.78
CTHRC1Q96CG8 AC093788.1-201ENST00000609356 927 ntBASIC3.95□□□□□ -1.78
CTHRC1Q96CG8 MIR6716-201ENST00000613413 80 ntBASIC3.95□□□□□ -1.78
CTHRC1Q96CG8 SNX18P1Y-201ENST00000616231 511 ntBASIC3.95□□□□□ -1.78
CTHRC1Q96CG8 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.95□□□□□ -1.78
CTHRC1Q96CG8 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.95□□□□□ -1.78
CTHRC1Q96CG8 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.95□□□□□ -1.78
CTHRC1Q96CG8 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC3.95□□□□□ -1.78
CTHRC1Q96CG8 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CTHRC1Q96CG8 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CTHRC1Q96CG8 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CTHRC1Q96CG8 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.95□□□□□ -1.78
CTHRC1Q96CG8 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.95□□□□□ -1.78
CTHRC1Q96CG8 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CTHRC1Q96CG8 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC3.94□□□□□ -1.78
CTHRC1Q96CG8 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.94□□□□□ -1.78
CTHRC1Q96CG8 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
CTHRC1Q96CG8 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CTHRC1Q96CG8 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CTHRC1Q96CG8 U3.11-201ENST00000364476 212 ntBASIC3.94□□□□□ -1.78
CTHRC1Q96CG8 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.94□□□□□ -1.78
CTHRC1Q96CG8 RNU6-432P-201ENST00000384196 109 ntBASIC3.94□□□□□ -1.78
CTHRC1Q96CG8 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CTHRC1Q96CG8 RPS4XP8-201ENST00000402039 771 ntBASIC3.94□□□□□ -1.78
CTHRC1Q96CG8 RAP1BP3-201ENST00000407180 549 ntBASIC3.94□□□□□ -1.78
CTHRC1Q96CG8 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CTHRC1Q96CG8 JKAMPP1-201ENST00000413804 919 ntBASIC3.94□□□□□ -1.78
CTHRC1Q96CG8 AC092447.6-201ENST00000414578 210 ntBASIC3.94□□□□□ -1.78
CTHRC1Q96CG8 OR1AA1P-201ENST00000419597 916 ntBASIC3.94□□□□□ -1.78
CTHRC1Q96CG8 AL353193.1-201ENST00000421444 268 ntBASIC3.94□□□□□ -1.78
CTHRC1Q96CG8 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.94□□□□□ -1.78
CTHRC1Q96CG8 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.94□□□□□ -1.78
CTHRC1Q96CG8 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CTHRC1Q96CG8 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CTHRC1Q96CG8 BNIP3P2-201ENST00000441221 577 ntBASIC3.94□□□□□ -1.78
CTHRC1Q96CG8 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.94□□□□□ -1.78
CTHRC1Q96CG8 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.94□□□□□ -1.78
CTHRC1Q96CG8 NANOGP10-201ENST00000453325 895 ntBASIC3.94□□□□□ -1.78
CTHRC1Q96CG8 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.94□□□□□ -1.78
CTHRC1Q96CG8 AC010618.1-201ENST00000469924 477 ntBASIC3.94□□□□□ -1.78
CTHRC1Q96CG8 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.94□□□□□ -1.78
CTHRC1Q96CG8 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.94□□□□□ -1.78
CTHRC1Q96CG8 AC068305.1-201ENST00000497406 726 ntBASIC3.94□□□□□ -1.78
CTHRC1Q96CG8 AC020893.1-201ENST00000502452 580 ntBASIC3.94□□□□□ -1.78
CTHRC1Q96CG8 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.94□□□□□ -1.78
CTHRC1Q96CG8 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.94□□□□□ -1.78
CTHRC1Q96CG8 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.94□□□□□ -1.78
CTHRC1Q96CG8 RNU2-10P-201ENST00000516375 211 ntBASIC3.94□□□□□ -1.78
CTHRC1Q96CG8 MYL12AP1-201ENST00000518490 515 ntBASIC3.94□□□□□ -1.78
CTHRC1Q96CG8 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.94□□□□□ -1.78
CTHRC1Q96CG8 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.94□□□□□ -1.78
CTHRC1Q96CG8 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.94□□□□□ -1.78
CTHRC1Q96CG8 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.94□□□□□ -1.78
CTHRC1Q96CG8 CYP4A43P-201ENST00000568156 121 ntBASIC3.94□□□□□ -1.78
CTHRC1Q96CG8 HMGB1P6-201ENST00000569046 646 ntBASIC3.94□□□□□ -1.78
CTHRC1Q96CG8 AC023575.1-201ENST00000580510 358 ntBASIC3.94□□□□□ -1.78
CTHRC1Q96CG8 AC006254.3-201ENST00000603353 884 ntBASIC3.94□□□□□ -1.78
CTHRC1Q96CG8 AC025449.1-201ENST00000603896 529 ntBASIC3.94□□□□□ -1.78
CTHRC1Q96CG8 AL031666.3-201ENST00000609320 1006 ntBASIC3.94□□□□□ -1.78
CTHRC1Q96CG8 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
CTHRC1Q96CG8 AC025253.1-201ENST00000613623 543 ntBASIC3.94□□□□□ -1.78
CTHRC1Q96CG8 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.94□□□□□ -1.78
CTHRC1Q96CG8 AL603758.1-201ENST00000618654 241 ntBASIC3.94□□□□□ -1.78
CTHRC1Q96CG8 DUXAP9-208ENST00000622815 614 ntBASIC3.94□□□□□ -1.78
CTHRC1Q96CG8 MIR3653-201ENST00000625572 110 ntBASIC3.94□□□□□ -1.78
CTHRC1Q96CG8 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.94□□□□□ -1.78
CTHRC1Q96CG8 OR52H1-202ENST00000641796 1061 ntBASIC3.94□□□□□ -1.78
CTHRC1Q96CG8 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CTHRC1Q96CG8 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms