Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 AC092628.2-201ENST00000622492 339 ntBASIC3.91□□□□□ -1.78
SKA1Q96BD8 FP236240.3-201ENST00000623061 327 ntBASIC3.91□□□□□ -1.78
SKA1Q96BD8 AP000676.4-201ENST00000624659 623 ntBASIC3.91□□□□□ -1.78
SKA1Q96BD8 AC019226.1-201ENST00000625666 515 ntBASIC3.91□□□□□ -1.78
SKA1Q96BD8 AC099063.3-201ENST00000642066 185 ntBASIC3.91□□□□□ -1.78
SKA1Q96BD8 TPTE2P4-201ENST00000258589 1605 ntBASIC3.91□□□□□ -1.78
SKA1Q96BD8 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SKA1Q96BD8 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SKA1Q96BD8 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
SKA1Q96BD8 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
SKA1Q96BD8 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
SKA1Q96BD8 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
SKA1Q96BD8 AL391994.1-201ENST00000254724 282 ntBASIC3.9□□□□□ -1.79
SKA1Q96BD8 RNU6-433P-201ENST00000363216 104 ntBASIC3.9□□□□□ -1.79
SKA1Q96BD8 Y_RNA.302-201ENST00000364997 102 ntBASIC3.9□□□□□ -1.79
SKA1Q96BD8 SNORA36C-201ENST00000384289 132 ntBASIC3.9□□□□□ -1.79
SKA1Q96BD8 AL590084.2-201ENST00000401481 382 ntBASIC3.9□□□□□ -1.79
SKA1Q96BD8 RNA5SP38-201ENST00000410750 119 ntBASIC3.9□□□□□ -1.79
SKA1Q96BD8 AL359704.1-201ENST00000411586 781 ntBASIC3.9□□□□□ -1.79
SKA1Q96BD8 HMGB1P11-201ENST00000413899 637 ntBASIC3.9□□□□□ -1.79
SKA1Q96BD8 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.9□□□□□ -1.79
SKA1Q96BD8 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.9□□□□□ -1.79
SKA1Q96BD8 AC234781.2-201ENST00000426370 994 ntBASIC3.9□□□□□ -1.79
SKA1Q96BD8 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.9□□□□□ -1.79
SKA1Q96BD8 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.9□□□□□ -1.79
SKA1Q96BD8 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.9□□□□□ -1.79
SKA1Q96BD8 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.9□□□□□ -1.79
SKA1Q96BD8 NANOGP10-201ENST00000453325 895 ntBASIC3.9□□□□□ -1.79
SKA1Q96BD8 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.9□□□□□ -1.79
SKA1Q96BD8 RN7SL330P-201ENST00000469709 307 ntBASIC3.9□□□□□ -1.79
SKA1Q96BD8 AL049874.1-201ENST00000489560 388 ntBASIC3.9□□□□□ -1.79
SKA1Q96BD8 RPL30P5-201ENST00000494923 336 ntBASIC3.9□□□□□ -1.79
SKA1Q96BD8 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.9□□□□□ -1.79
SKA1Q96BD8 AP004247.1-201ENST00000531556 1289 ntBASIC3.9□□□□□ -1.79
SKA1Q96BD8 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.9□□□□□ -1.79
SKA1Q96BD8 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.9□□□□□ -1.79
SKA1Q96BD8 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.9□□□□□ -1.79
SKA1Q96BD8 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.9□□□□□ -1.79
SKA1Q96BD8 AC006116.10-201ENST00000591836 581 ntBASIC3.9□□□□□ -1.79
SKA1Q96BD8 AC022146.1-201ENST00000595307 847 ntBASIC3.9□□□□□ -1.79
SKA1Q96BD8 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.9□□□□□ -1.79
SKA1Q96BD8 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.9□□□□□ -1.79
SKA1Q96BD8 AL121772.2-201ENST00000614331 297 ntBASIC3.9□□□□□ -1.79
SKA1Q96BD8 AL138880.2-201ENST00000616214 239 ntBASIC3.9□□□□□ -1.79
SKA1Q96BD8 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.9□□□□□ -1.79
SKA1Q96BD8 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
SKA1Q96BD8 AL603758.1-201ENST00000618654 241 ntBASIC3.9□□□□□ -1.79
SKA1Q96BD8 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
SKA1Q96BD8 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.9□□□□□ -1.79
SKA1Q96BD8 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.9□□□□□ -1.79
SKA1Q96BD8 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SKA1Q96BD8 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SKA1Q96BD8 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.89□□□□□ -1.79
SKA1Q96BD8 AC005183.1-201ENST00000603687 1979 ntBASIC3.89□□□□□ -1.79
SKA1Q96BD8 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.89□□□□□ -1.79
SKA1Q96BD8 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SKA1Q96BD8 SNORA71.3-201ENST00000362582 128 ntBASIC3.89□□□□□ -1.79
SKA1Q96BD8 RNU1-101P-201ENST00000391171 127 ntBASIC3.89□□□□□ -1.79
SKA1Q96BD8 HLFP1-201ENST00000402375 499 ntBASIC3.89□□□□□ -1.79
SKA1Q96BD8 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
SKA1Q96BD8 AC245054.1-201ENST00000420944 258 ntBASIC3.89□□□□□ -1.79
SKA1Q96BD8 NDUFB4P7-201ENST00000423198 363 ntBASIC3.89□□□□□ -1.79
SKA1Q96BD8 TBCAP1-201ENST00000436520 327 ntBASIC3.89□□□□□ -1.79
SKA1Q96BD8 AL008629.1-201ENST00000438615 184 ntBASIC3.89□□□□□ -1.79
SKA1Q96BD8 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.89□□□□□ -1.79
SKA1Q96BD8 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC3.89□□□□□ -1.79
SKA1Q96BD8 AP1S2P1-201ENST00000457344 379 ntBASIC3.89□□□□□ -1.79
SKA1Q96BD8 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.89□□□□□ -1.79
SKA1Q96BD8 RPL7P49-201ENST00000471402 708 ntBASIC3.89□□□□□ -1.79
SKA1Q96BD8 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.89□□□□□ -1.79
SKA1Q96BD8 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.89□□□□□ -1.79
SKA1Q96BD8 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.89□□□□□ -1.79
SKA1Q96BD8 AC023538.1-201ENST00000534576 736 ntBASIC3.89□□□□□ -1.79
SKA1Q96BD8 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
SKA1Q96BD8 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.89□□□□□ -1.79
SKA1Q96BD8 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.89□□□□□ -1.79
SKA1Q96BD8 AL121576.1-201ENST00000556055 276 ntBASIC3.89□□□□□ -1.79
SKA1Q96BD8 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.89□□□□□ -1.79
SKA1Q96BD8 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.89□□□□□ -1.79
SKA1Q96BD8 AP000811.1-201ENST00000603803 651 ntBASIC3.89□□□□□ -1.79
SKA1Q96BD8 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.89□□□□□ -1.79
SKA1Q96BD8 AC027309.3-201ENST00000623419 351 ntBASIC3.89□□□□□ -1.79
SKA1Q96BD8 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.89□□□□□ -1.79
SKA1Q96BD8 AL034408.1-202ENST00000636088 415 ntBASIC3.89□□□□□ -1.79
SKA1Q96BD8 AC093010.3-201ENST00000570269 15214 ntBASIC3.89□□□□□ -1.79
SKA1Q96BD8 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SKA1Q96BD8 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
SKA1Q96BD8 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
SKA1Q96BD8 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.89□□□□□ -1.79
SKA1Q96BD8 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SKA1Q96BD8 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.89□□□□□ -1.79
SKA1Q96BD8 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.89□□□□□ -1.79
SKA1Q96BD8 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.88□□□□□ -1.79
SKA1Q96BD8 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
SKA1Q96BD8 RNA5SP119-201ENST00000362715 117 ntBASIC3.88□□□□□ -1.79
SKA1Q96BD8 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
SKA1Q96BD8 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
SKA1Q96BD8 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
SKA1Q96BD8 MIR514A1-201ENST00000385133 98 ntBASIC3.88□□□□□ -1.79
SKA1Q96BD8 AC119751.3-201ENST00000399720 670 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms