Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC4.82□□□□□ -1.64
ERCC4Q92889 AC104164.2-201ENST00000496953 495 ntBASIC4.82□□□□□ -1.64
ERCC4Q92889 MTCO2P30-201ENST00000503662 364 ntBASIC4.82□□□□□ -1.64
ERCC4Q92889 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.82□□□□□ -1.64
ERCC4Q92889 AC018710.1-201ENST00000506509 158 ntBASIC4.82□□□□□ -1.64
ERCC4Q92889 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.82□□□□□ -1.64
ERCC4Q92889 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.82□□□□□ -1.64
ERCC4Q92889 RNU6-835P-201ENST00000516974 104 ntBASIC4.82□□□□□ -1.64
ERCC4Q92889 IGLVIV-65-201ENST00000517313 360 ntBASIC4.82□□□□□ -1.64
ERCC4Q92889 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC4.82□□□□□ -1.64
ERCC4Q92889 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.82□□□□□ -1.64
ERCC4Q92889 SETP2-201ENST00000553886 926 ntBASIC4.82□□□□□ -1.64
ERCC4Q92889 MIR4458-201ENST00000578872 75 ntBASIC4.82□□□□□ -1.64
ERCC4Q92889 AC113194.1-201ENST00000606037 500 ntBASIC4.82□□□□□ -1.64
ERCC4Q92889 AL158211.4-201ENST00000606988 584 ntBASIC4.82□□□□□ -1.64
ERCC4Q92889 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.82□□□□□ -1.64
ERCC4Q92889 AL021997.2-201ENST00000615674 271 ntBASIC4.82□□□□□ -1.64
ERCC4Q92889 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.82□□□□□ -1.64
ERCC4Q92889 AC010300.1-201ENST00000600671 5134 ntBASIC4.82□□□□□ -1.64
ERCC4Q92889 AC009902.3-201ENST00000606235 2172 ntBASIC4.82□□□□□ -1.64
ERCC4Q92889 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
ERCC4Q92889 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC4.82□□□□□ -1.64
ERCC4Q92889 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ERCC4Q92889 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
ERCC4Q92889 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ERCC4Q92889 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ERCC4Q92889 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
ERCC4Q92889 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
ERCC4Q92889 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ERCC4Q92889 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
ERCC4Q92889 RNA5SP505-201ENST00000364748 108 ntBASIC4.81□□□□□ -1.64
ERCC4Q92889 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ERCC4Q92889 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ERCC4Q92889 SNORA56-201ENST00000383966 129 ntBASIC4.81□□□□□ -1.64
ERCC4Q92889 Y_RNA.548-201ENST00000384656 105 ntBASIC4.81□□□□□ -1.64
ERCC4Q92889 U3.20-201ENST00000390909 217 ntBASIC4.81□□□□□ -1.64
ERCC4Q92889 RNU6-1009P-201ENST00000390996 107 ntBASIC4.81□□□□□ -1.64
ERCC4Q92889 RPL7P60-201ENST00000397636 735 ntBASIC4.81□□□□□ -1.64
ERCC4Q92889 MIR1183-201ENST00000408856 89 ntBASIC4.81□□□□□ -1.64
ERCC4Q92889 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.81□□□□□ -1.64
ERCC4Q92889 AC127526.1-201ENST00000417526 366 ntBASIC4.81□□□□□ -1.64
ERCC4Q92889 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC4.81□□□□□ -1.64
ERCC4Q92889 RPL23AP89-201ENST00000439324 255 ntBASIC4.81□□□□□ -1.64
ERCC4Q92889 RPL7P52-201ENST00000449200 742 ntBASIC4.81□□□□□ -1.64
ERCC4Q92889 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.81□□□□□ -1.64
ERCC4Q92889 AC022364.2-201ENST00000457963 554 ntBASIC4.81□□□□□ -1.64
ERCC4Q92889 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
ERCC4Q92889 AC006463.2-201ENST00000473326 348 ntBASIC4.81□□□□□ -1.64
ERCC4Q92889 AC021382.1-201ENST00000483523 359 ntBASIC4.81□□□□□ -1.64
ERCC4Q92889 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.81□□□□□ -1.64
ERCC4Q92889 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC4.81□□□□□ -1.64
ERCC4Q92889 OR4R3P-201ENST00000525084 838 ntBASIC4.81□□□□□ -1.64
ERCC4Q92889 AP000827.1-201ENST00000527814 258 ntBASIC4.81□□□□□ -1.64
ERCC4Q92889 AC024224.1-201ENST00000538284 609 ntBASIC4.81□□□□□ -1.64
ERCC4Q92889 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.81□□□□□ -1.64
ERCC4Q92889 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.81□□□□□ -1.64
ERCC4Q92889 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.81□□□□□ -1.64
ERCC4Q92889 MIR3146-201ENST00000580367 79 ntBASIC4.81□□□□□ -1.64
ERCC4Q92889 AC005261.5-201ENST00000596280 355 ntBASIC4.81□□□□□ -1.64
ERCC4Q92889 NRBF2P5-201ENST00000603087 788 ntBASIC4.81□□□□□ -1.64
ERCC4Q92889 AC025449.1-201ENST00000603896 529 ntBASIC4.81□□□□□ -1.64
ERCC4Q92889 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.81□□□□□ -1.64
ERCC4Q92889 AP000346.3-201ENST00000622821 210 ntBASIC4.81□□□□□ -1.64
ERCC4Q92889 AL445363.3-201ENST00000623080 671 ntBASIC4.81□□□□□ -1.64
ERCC4Q92889 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.81□□□□□ -1.64
ERCC4Q92889 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ERCC4Q92889 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
ERCC4Q92889 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.81□□□□□ -1.64
ERCC4Q92889 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
ERCC4Q92889 MARK2P15-201ENST00000432204 2186 ntBASIC4.81□□□□□ -1.64
ERCC4Q92889 AC011460.1-201ENST00000636268 1834 ntBASIC4.81□□□□□ -1.64
ERCC4Q92889 NMD3P1-201ENST00000439704 1488 ntBASIC4.81□□□□□ -1.64
ERCC4Q92889 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
ERCC4Q92889 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
ERCC4Q92889 AC006971.1-201ENST00000407916 4486 ntBASIC4.8□□□□□ -1.64
ERCC4Q92889 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
ERCC4Q92889 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.8□□□□□ -1.64
ERCC4Q92889 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
ERCC4Q92889 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
ERCC4Q92889 RNU6-1120P-201ENST00000362988 108 ntBASIC4.8□□□□□ -1.64
ERCC4Q92889 RNU6-1097P-201ENST00000363586 107 ntBASIC4.8□□□□□ -1.64
ERCC4Q92889 U3.29-201ENST00000391296 212 ntBASIC4.8□□□□□ -1.64
ERCC4Q92889 RN7SKP235-201ENST00000410662 305 ntBASIC4.8□□□□□ -1.64
ERCC4Q92889 Y_RNA.625-201ENST00000411256 107 ntBASIC4.8□□□□□ -1.64
ERCC4Q92889 AL161631.1-201ENST00000417933 486 ntBASIC4.8□□□□□ -1.64
ERCC4Q92889 AC006548.1-201ENST00000427470 102 ntBASIC4.8□□□□□ -1.64
ERCC4Q92889 GTF2IP20-201ENST00000431663 360 ntBASIC4.8□□□□□ -1.64
ERCC4Q92889 HMGB3P12-201ENST00000438745 556 ntBASIC4.8□□□□□ -1.64
ERCC4Q92889 AC127537.2-201ENST00000439258 465 ntBASIC4.8□□□□□ -1.64
ERCC4Q92889 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC4.8□□□□□ -1.64
ERCC4Q92889 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC4.8□□□□□ -1.64
ERCC4Q92889 TPT1P13-201ENST00000449760 499 ntBASIC4.8□□□□□ -1.64
ERCC4Q92889 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.8□□□□□ -1.64
ERCC4Q92889 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
ERCC4Q92889 RPL39P36-201ENST00000490784 156 ntBASIC4.8□□□□□ -1.64
ERCC4Q92889 AK3P4-201ENST00000504283 583 ntBASIC4.8□□□□□ -1.64
ERCC4Q92889 AC139783.2-201ENST00000504847 1145 ntBASIC4.8□□□□□ -1.64
ERCC4Q92889 AL592156.1-201ENST00000508758 304 ntBASIC4.8□□□□□ -1.64
ERCC4Q92889 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC4.8□□□□□ -1.64
ERCC4Q92889 RNU6-1220P-201ENST00000517126 108 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms