Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AL356535.1-201ENST00000440335 398 ntBASIC4.15□□□□□ -1.75
ATG4AQ8WYN0 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.15□□□□□ -1.75
ATG4AQ8WYN0 SNORD121B-201ENST00000458838 81 ntBASIC4.15□□□□□ -1.75
ATG4AQ8WYN0 RN7SL604P-201ENST00000492589 296 ntBASIC4.15□□□□□ -1.75
ATG4AQ8WYN0 AC069439.1-201ENST00000494739 167 ntBASIC4.15□□□□□ -1.75
ATG4AQ8WYN0 AL139099.1-201ENST00000497398 403 ntBASIC4.15□□□□□ -1.75
ATG4AQ8WYN0 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.15□□□□□ -1.75
ATG4AQ8WYN0 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.15□□□□□ -1.75
ATG4AQ8WYN0 AC026726.1-201ENST00000512859 601 ntBASIC4.15□□□□□ -1.75
ATG4AQ8WYN0 AC008549.1-201ENST00000512900 643 ntBASIC4.15□□□□□ -1.75
ATG4AQ8WYN0 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.15□□□□□ -1.75
ATG4AQ8WYN0 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.15□□□□□ -1.75
ATG4AQ8WYN0 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.15□□□□□ -1.75
ATG4AQ8WYN0 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
ATG4AQ8WYN0 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.15□□□□□ -1.75
ATG4AQ8WYN0 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.15□□□□□ -1.75
ATG4AQ8WYN0 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.15□□□□□ -1.75
ATG4AQ8WYN0 AL355812.1-201ENST00000603215 216 ntBASIC4.15□□□□□ -1.75
ATG4AQ8WYN0 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.15□□□□□ -1.75
ATG4AQ8WYN0 AL591424.2-201ENST00000617023 128 ntBASIC4.15□□□□□ -1.75
ATG4AQ8WYN0 AC131238.1-201ENST00000617135 328 ntBASIC4.15□□□□□ -1.75
ATG4AQ8WYN0 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
ATG4AQ8WYN0 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.15□□□□□ -1.75
ATG4AQ8WYN0 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
ATG4AQ8WYN0 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
ATG4AQ8WYN0 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
ATG4AQ8WYN0 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.15□□□□□ -1.75
ATG4AQ8WYN0 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
ATG4AQ8WYN0 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
ATG4AQ8WYN0 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
ATG4AQ8WYN0 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
ATG4AQ8WYN0 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
ATG4AQ8WYN0 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
ATG4AQ8WYN0 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.14□□□□□ -1.75
ATG4AQ8WYN0 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ATG4AQ8WYN0 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
ATG4AQ8WYN0 ZNF33CP-201ENST00000432492 2030 ntBASIC4.14□□□□□ -1.75
ATG4AQ8WYN0 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.14□□□□□ -1.75
ATG4AQ8WYN0 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
ATG4AQ8WYN0 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.14□□□□□ -1.75
ATG4AQ8WYN0 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ATG4AQ8WYN0 AC093535.2-201ENST00000624769 2326 ntBASIC4.14□□□□□ -1.75
ATG4AQ8WYN0 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ATG4AQ8WYN0 Y_RNA.295-201ENST00000364918 102 ntBASIC4.14□□□□□ -1.75
ATG4AQ8WYN0 Y_RNA.481-201ENST00000384373 102 ntBASIC4.14□□□□□ -1.75
ATG4AQ8WYN0 AL603766.1-201ENST00000407763 664 ntBASIC4.14□□□□□ -1.75
ATG4AQ8WYN0 RPS3AP24-201ENST00000407896 734 ntBASIC4.14□□□□□ -1.75
ATG4AQ8WYN0 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ATG4AQ8WYN0 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.14□□□□□ -1.75
ATG4AQ8WYN0 AL139413.1-201ENST00000421309 217 ntBASIC4.14□□□□□ -1.75
ATG4AQ8WYN0 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
ATG4AQ8WYN0 AC245028.1-201ENST00000423259 256 ntBASIC4.14□□□□□ -1.75
ATG4AQ8WYN0 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
ATG4AQ8WYN0 AF228730.2-201ENST00000438784 848 ntBASIC4.14□□□□□ -1.75
ATG4AQ8WYN0 DPPA3P1-201ENST00000448050 469 ntBASIC4.14□□□□□ -1.75
ATG4AQ8WYN0 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.14□□□□□ -1.75
ATG4AQ8WYN0 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.14□□□□□ -1.75
ATG4AQ8WYN0 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.14□□□□□ -1.75
ATG4AQ8WYN0 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC4.14□□□□□ -1.75
ATG4AQ8WYN0 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.14□□□□□ -1.75
ATG4AQ8WYN0 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.14□□□□□ -1.75
ATG4AQ8WYN0 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.14□□□□□ -1.75
ATG4AQ8WYN0 AC022616.3-201ENST00000523940 148 ntBASIC4.14□□□□□ -1.75
ATG4AQ8WYN0 AP003072.2-201ENST00000527756 676 ntBASIC4.14□□□□□ -1.75
ATG4AQ8WYN0 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.14□□□□□ -1.75
ATG4AQ8WYN0 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.14□□□□□ -1.75
ATG4AQ8WYN0 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.14□□□□□ -1.75
ATG4AQ8WYN0 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.14□□□□□ -1.75
ATG4AQ8WYN0 AL161713.1-201ENST00000555538 145 ntBASIC4.14□□□□□ -1.75
ATG4AQ8WYN0 AL360157.1-201ENST00000565962 87 ntBASIC4.14□□□□□ -1.75
ATG4AQ8WYN0 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.14□□□□□ -1.75
ATG4AQ8WYN0 AC008745.1-201ENST00000604064 271 ntBASIC4.14□□□□□ -1.75
ATG4AQ8WYN0 AP001330.5-201ENST00000607176 411 ntBASIC4.14□□□□□ -1.75
ATG4AQ8WYN0 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.14□□□□□ -1.75
ATG4AQ8WYN0 AC006329.2-201ENST00000611491 394 ntBASIC4.14□□□□□ -1.75
ATG4AQ8WYN0 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
ATG4AQ8WYN0 AL590099.1-201ENST00000615276 138 ntBASIC4.14□□□□□ -1.75
ATG4AQ8WYN0 AC092794.2-201ENST00000620933 563 ntBASIC4.14□□□□□ -1.75
ATG4AQ8WYN0 AC103858.2-201ENST00000621471 543 ntBASIC4.14□□□□□ -1.75
ATG4AQ8WYN0 AL159972.1-201ENST00000625150 448 ntBASIC4.14□□□□□ -1.75
ATG4AQ8WYN0 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC4.14□□□□□ -1.75
ATG4AQ8WYN0 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ATG4AQ8WYN0 ASNSP1-201ENST00000518311 1939 ntBASIC4.14□□□□□ -1.75
ATG4AQ8WYN0 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ATG4AQ8WYN0 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.14□□□□□ -1.75
ATG4AQ8WYN0 AC009951.1-201ENST00000623674 2614 ntBASIC4.14□□□□□ -1.75
ATG4AQ8WYN0 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.14□□□□□ -1.75
ATG4AQ8WYN0 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
ATG4AQ8WYN0 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
ATG4AQ8WYN0 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
ATG4AQ8WYN0 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.13□□□□□ -1.75
ATG4AQ8WYN0 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
ATG4AQ8WYN0 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
ATG4AQ8WYN0 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
ATG4AQ8WYN0 UBE3AP2-201ENST00000429033 2259 ntBASIC4.13□□□□□ -1.75
ATG4AQ8WYN0 RNU1-39P-201ENST00000383897 165 ntBASIC4.13□□□□□ -1.75
ATG4AQ8WYN0 RNU6-483P-201ENST00000384088 108 ntBASIC4.13□□□□□ -1.75
ATG4AQ8WYN0 RNU6-761P-201ENST00000384148 107 ntBASIC4.13□□□□□ -1.75
ATG4AQ8WYN0 RNU6-114P-201ENST00000384704 105 ntBASIC4.13□□□□□ -1.75
ATG4AQ8WYN0 MT-TC-201ENST00000387405 66 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms