Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC2.4□□□□□ -2.02
SHROOM3Q8TF72 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.4□□□□□ -2.02
SHROOM3Q8TF72 AC013410.2-201ENST00000422627 201 ntBASIC2.4□□□□□ -2.02
SHROOM3Q8TF72 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC2.4□□□□□ -2.02
SHROOM3Q8TF72 FO393414.1-201ENST00000428697 1184 ntBASIC2.4□□□□□ -2.02
SHROOM3Q8TF72 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC2.4□□□□□ -2.02
SHROOM3Q8TF72 snoU109.3-201ENST00000459477 145 ntBASIC2.4□□□□□ -2.02
SHROOM3Q8TF72 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC2.4□□□□□ -2.02
SHROOM3Q8TF72 AC093752.1-206ENST00000511823 336 ntBASIC2.4□□□□□ -2.02
SHROOM3Q8TF72 RNA5SP402-201ENST00000517148 110 ntBASIC2.4□□□□□ -2.02
SHROOM3Q8TF72 AC010376.1-201ENST00000522101 334 ntBASIC2.4□□□□□ -2.02
SHROOM3Q8TF72 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.4□□□□□ -2.02
SHROOM3Q8TF72 AC004486.1-201ENST00000546846 233 ntBASIC2.4□□□□□ -2.02
SHROOM3Q8TF72 AC090751.1-201ENST00000566966 267 ntBASIC2.4□□□□□ -2.02
SHROOM3Q8TF72 MIR1273D-201ENST00000577266 86 ntBASIC2.4□□□□□ -2.02
SHROOM3Q8TF72 RN7SL622P-201ENST00000585292 275 ntBASIC2.4□□□□□ -2.02
SHROOM3Q8TF72 MIR6873-201ENST00000622788 63 ntBASIC2.4□□□□□ -2.02
SHROOM3Q8TF72 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.4□□□□□ -2.03
SHROOM3Q8TF72 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
SHROOM3Q8TF72 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.03
SHROOM3Q8TF72 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
SHROOM3Q8TF72 RNU6-792P-201ENST00000363490 107 ntBASIC2.4□□□□□ -2.03
SHROOM3Q8TF72 SNORD56.4-201ENST00000363883 71 ntBASIC2.4□□□□□ -2.03
SHROOM3Q8TF72 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
SHROOM3Q8TF72 MIR518E-201ENST00000385252 88 ntBASIC2.4□□□□□ -2.03
SHROOM3Q8TF72 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
SHROOM3Q8TF72 AL035405.1-201ENST00000400795 710 ntBASIC2.4□□□□□ -2.03
SHROOM3Q8TF72 ATF1P1-201ENST00000406040 927 ntBASIC2.4□□□□□ -2.03
SHROOM3Q8TF72 AC069282.1-201ENST00000411911 526 ntBASIC2.4□□□□□ -2.03
SHROOM3Q8TF72 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.4□□□□□ -2.03
SHROOM3Q8TF72 UBE2V1P9-201ENST00000414760 368 ntBASIC2.4□□□□□ -2.03
SHROOM3Q8TF72 AL354692.1-201ENST00000423044 315 ntBASIC2.4□□□□□ -2.03
SHROOM3Q8TF72 PNRC2P1-201ENST00000423940 420 ntBASIC2.4□□□□□ -2.03
SHROOM3Q8TF72 TPTE2P6-202ENST00000445572 1007 ntBASIC2.4□□□□□ -2.03
SHROOM3Q8TF72 MTND2P39-201ENST00000457230 764 ntBASIC2.4□□□□□ -2.03
SHROOM3Q8TF72 AC104164.3-201ENST00000467363 1258 ntBASIC2.4□□□□□ -2.03
SHROOM3Q8TF72 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC2.4□□□□□ -2.03
SHROOM3Q8TF72 RNU5A-7P-201ENST00000515979 116 ntBASIC2.4□□□□□ -2.03
SHROOM3Q8TF72 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC2.4□□□□□ -2.03
SHROOM3Q8TF72 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.4□□□□□ -2.03
SHROOM3Q8TF72 AC022069.1-201ENST00000582910 658 ntBASIC2.4□□□□□ -2.03
SHROOM3Q8TF72 VN1R84P-201ENST00000593697 235 ntBASIC2.4□□□□□ -2.03
SHROOM3Q8TF72 AP001033.2-201ENST00000609701 1003 ntBASIC2.4□□□□□ -2.03
SHROOM3Q8TF72 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.4□□□□□ -2.03
SHROOM3Q8TF72 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC2.4□□□□□ -2.03
SHROOM3Q8TF72 AC004943.3-201ENST00000624116 600 ntBASIC2.4□□□□□ -2.03
SHROOM3Q8TF72 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
SHROOM3Q8TF72 ENSAP3-201ENST00000312710 333 ntBASIC2.39□□□□□ -2.03
SHROOM3Q8TF72 SNORA17.3-201ENST00000391159 129 ntBASIC2.39□□□□□ -2.03
SHROOM3Q8TF72 RPS3AP26-201ENST00000398259 784 ntBASIC2.39□□□□□ -2.03
SHROOM3Q8TF72 GSTA9P-201ENST00000406231 611 ntBASIC2.39□□□□□ -2.03
SHROOM3Q8TF72 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC2.39□□□□□ -2.03
SHROOM3Q8TF72 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.39□□□□□ -2.03
SHROOM3Q8TF72 MTCYBP31-201ENST00000438855 1122 ntBASIC2.39□□□□□ -2.03
SHROOM3Q8TF72 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC2.39□□□□□ -2.03
SHROOM3Q8TF72 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC2.39□□□□□ -2.03
SHROOM3Q8TF72 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.39□□□□□ -2.03
SHROOM3Q8TF72 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
SHROOM3Q8TF72 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.39□□□□□ -2.03
SHROOM3Q8TF72 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC2.39□□□□□ -2.03
SHROOM3Q8TF72 SCARNA1-201ENST00000517138 166 ntBASIC2.39□□□□□ -2.03
SHROOM3Q8TF72 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.39□□□□□ -2.03
SHROOM3Q8TF72 AC006518.2-201ENST00000542513 940 ntBASIC2.39□□□□□ -2.03
SHROOM3Q8TF72 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.39□□□□□ -2.03
SHROOM3Q8TF72 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
SHROOM3Q8TF72 AC018926.1-201ENST00000616335 435 ntBASIC2.39□□□□□ -2.03
SHROOM3Q8TF72 AC009318.3-201ENST00000616916 503 ntBASIC2.39□□□□□ -2.03
SHROOM3Q8TF72 AC007275.1-201ENST00000621243 671 ntBASIC2.39□□□□□ -2.03
SHROOM3Q8TF72 AL049777.1-201ENST00000622740 518 ntBASIC2.39□□□□□ -2.03
SHROOM3Q8TF72 SNORA50A-202ENST00000629536 136 ntBASIC2.39□□□□□ -2.03
SHROOM3Q8TF72 AC096656.1-201ENST00000623826 1364 ntBASIC2.39□□□□□ -2.03
SHROOM3Q8TF72 Z99496.1-201ENST00000469424 1477 ntBASIC2.39□□□□□ -2.03
SHROOM3Q8TF72 AC073055.1-201ENST00000456901 1621 ntBASIC2.39□□□□□ -2.03
SHROOM3Q8TF72 MFSD8-213ENST00000641134 1327 ntBASIC2.39□□□□□ -2.03
SHROOM3Q8TF72 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.38□□□□□ -2.03
SHROOM3Q8TF72 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
SHROOM3Q8TF72 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.38□□□□□ -2.03
SHROOM3Q8TF72 RNU6-925P-201ENST00000384629 104 ntBASIC2.38□□□□□ -2.03
SHROOM3Q8TF72 RPL22P22-201ENST00000395439 379 ntBASIC2.38□□□□□ -2.03
SHROOM3Q8TF72 HMGB1P11-201ENST00000413899 637 ntBASIC2.38□□□□□ -2.03
SHROOM3Q8TF72 USP9YP21-201ENST00000420603 432 ntBASIC2.38□□□□□ -2.03
SHROOM3Q8TF72 AC093422.3-201ENST00000428506 305 ntBASIC2.38□□□□□ -2.03
SHROOM3Q8TF72 FABP5P3-201ENST00000437960 408 ntBASIC2.38□□□□□ -2.03
SHROOM3Q8TF72 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC2.38□□□□□ -2.03
SHROOM3Q8TF72 AL096829.2-201ENST00000446582 742 ntBASIC2.38□□□□□ -2.03
SHROOM3Q8TF72 RPL23AP70-201ENST00000483361 460 ntBASIC2.38□□□□□ -2.03
SHROOM3Q8TF72 RPL9P6-201ENST00000492764 598 ntBASIC2.38□□□□□ -2.03
SHROOM3Q8TF72 GTF2IP9-201ENST00000502460 301 ntBASIC2.38□□□□□ -2.03
SHROOM3Q8TF72 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC2.38□□□□□ -2.03
SHROOM3Q8TF72 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.38□□□□□ -2.03
SHROOM3Q8TF72 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC2.38□□□□□ -2.03
SHROOM3Q8TF72 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.38□□□□□ -2.03
SHROOM3Q8TF72 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.38□□□□□ -2.03
SHROOM3Q8TF72 AL606834.3-201ENST00000602615 496 ntBASIC2.38□□□□□ -2.03
SHROOM3Q8TF72 AL139022.2-201ENST00000606934 443 ntBASIC2.38□□□□□ -2.03
SHROOM3Q8TF72 AC092953.2-201ENST00000608000 699 ntBASIC2.38□□□□□ -2.03
SHROOM3Q8TF72 AL359198.2-201ENST00000611836 194 ntBASIC2.38□□□□□ -2.03
SHROOM3Q8TF72 VN1R7P-201ENST00000619242 903 ntBASIC2.38□□□□□ -2.03
SHROOM3Q8TF72 C2orf27A-204ENST00000623058 969 ntBASIC2.38□□□□□ -2.03
SHROOM3Q8TF72 AP003476.1-201ENST00000623984 516 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms