Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
USP38Q8NB14 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.14□□□□□ -1.75
USP38Q8NB14 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
USP38Q8NB14 AL133383.2-201ENST00000622958 2336 ntBASIC4.14□□□□□ -1.75
USP38Q8NB14 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
USP38Q8NB14 AL672167.1-206ENST00000356293 943 ntBASIC4.14□□□□□ -1.75
USP38Q8NB14 RNA5SP50-201ENST00000363731 107 ntBASIC4.14□□□□□ -1.75
USP38Q8NB14 RNU6-853P-201ENST00000364306 107 ntBASIC4.14□□□□□ -1.75
USP38Q8NB14 RNA5SP126-201ENST00000365092 109 ntBASIC4.14□□□□□ -1.75
USP38Q8NB14 MT-TH-201ENST00000387441 69 ntBASIC4.14□□□□□ -1.75
USP38Q8NB14 HLFP1-201ENST00000402375 499 ntBASIC4.14□□□□□ -1.75
USP38Q8NB14 RNU6-712P-201ENST00000410558 100 ntBASIC4.14□□□□□ -1.75
USP38Q8NB14 ATP5A1P2-201ENST00000412323 255 ntBASIC4.14□□□□□ -1.75
USP38Q8NB14 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.14□□□□□ -1.75
USP38Q8NB14 AC005300.1-201ENST00000428401 373 ntBASIC4.14□□□□□ -1.75
USP38Q8NB14 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.14□□□□□ -1.75
USP38Q8NB14 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.14□□□□□ -1.75
USP38Q8NB14 MTND4LP10-201ENST00000435146 291 ntBASIC4.14□□□□□ -1.75
USP38Q8NB14 LARP1BP3-201ENST00000437229 869 ntBASIC4.14□□□□□ -1.75
USP38Q8NB14 UBDP1-202ENST00000457888 382 ntBASIC4.14□□□□□ -1.75
USP38Q8NB14 AC092754.2-201ENST00000463506 460 ntBASIC4.14□□□□□ -1.75
USP38Q8NB14 HMGB1P25-201ENST00000468402 607 ntBASIC4.14□□□□□ -1.75
USP38Q8NB14 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC4.14□□□□□ -1.75
USP38Q8NB14 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.14□□□□□ -1.75
USP38Q8NB14 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC4.14□□□□□ -1.75
USP38Q8NB14 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.14□□□□□ -1.75
USP38Q8NB14 RNU2-58P-201ENST00000516403 183 ntBASIC4.14□□□□□ -1.75
USP38Q8NB14 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.14□□□□□ -1.75
USP38Q8NB14 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC4.14□□□□□ -1.75
USP38Q8NB14 PCMTD1P2-201ENST00000565017 355 ntBASIC4.14□□□□□ -1.75
USP38Q8NB14 MIR544B-201ENST00000582372 78 ntBASIC4.14□□□□□ -1.75
USP38Q8NB14 AC128687.1-201ENST00000605304 619 ntBASIC4.14□□□□□ -1.75
USP38Q8NB14 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.14□□□□□ -1.75
USP38Q8NB14 AC119674.1-207ENST00000641355 633 ntBASIC4.14□□□□□ -1.75
USP38Q8NB14 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
USP38Q8NB14 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.14□□□□□ -1.75
USP38Q8NB14 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.14□□□□□ -1.75
USP38Q8NB14 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
USP38Q8NB14 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.13□□□□□ -1.75
USP38Q8NB14 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
USP38Q8NB14 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.13□□□□□ -1.75
USP38Q8NB14 RNU6-97P-201ENST00000363387 104 ntBASIC4.13□□□□□ -1.75
USP38Q8NB14 RNU6-501P-201ENST00000364072 100 ntBASIC4.13□□□□□ -1.75
USP38Q8NB14 Y_RNA.234-201ENST00000364409 97 ntBASIC4.13□□□□□ -1.75
USP38Q8NB14 RNU6-1207P-201ENST00000384343 107 ntBASIC4.13□□□□□ -1.75
USP38Q8NB14 UBA52P6-201ENST00000399822 382 ntBASIC4.13□□□□□ -1.75
USP38Q8NB14 MTCYBP36-201ENST00000404146 440 ntBASIC4.13□□□□□ -1.75
USP38Q8NB14 RPL21P109-201ENST00000422213 475 ntBASIC4.13□□□□□ -1.75
USP38Q8NB14 AL365338.1-201ENST00000422282 858 ntBASIC4.13□□□□□ -1.75
USP38Q8NB14 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC4.13□□□□□ -1.75
USP38Q8NB14 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.13□□□□□ -1.75
USP38Q8NB14 AC073063.1-201ENST00000434352 607 ntBASIC4.13□□□□□ -1.75
USP38Q8NB14 AL138799.3-201ENST00000438968 350 ntBASIC4.13□□□□□ -1.75
USP38Q8NB14 OR6K1P-201ENST00000456766 971 ntBASIC4.13□□□□□ -1.75
USP38Q8NB14 AC010468.1-201ENST00000461022 817 ntBASIC4.13□□□□□ -1.75
USP38Q8NB14 RPL21P8-201ENST00000465083 535 ntBASIC4.13□□□□□ -1.75
USP38Q8NB14 AC092451.1-201ENST00000480211 153 ntBASIC4.13□□□□□ -1.75
USP38Q8NB14 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
USP38Q8NB14 OR2A20P-203ENST00000498397 1268 ntBASIC4.13□□□□□ -1.75
USP38Q8NB14 TXNP6-201ENST00000510190 310 ntBASIC4.13□□□□□ -1.75
USP38Q8NB14 AC116347.2-201ENST00000514912 523 ntBASIC4.13□□□□□ -1.75
USP38Q8NB14 AC106038.2-201ENST00000520706 568 ntBASIC4.13□□□□□ -1.75
USP38Q8NB14 AP004371.1-201ENST00000525240 214 ntBASIC4.13□□□□□ -1.75
USP38Q8NB14 AL356057.1-201ENST00000533798 831 ntBASIC4.13□□□□□ -1.75
USP38Q8NB14 AC068587.4-201ENST00000533893 186 ntBASIC4.13□□□□□ -1.75
USP38Q8NB14 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC4.13□□□□□ -1.75
USP38Q8NB14 AC092851.1-201ENST00000535964 478 ntBASIC4.13□□□□□ -1.75
USP38Q8NB14 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.13□□□□□ -1.75
USP38Q8NB14 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.13□□□□□ -1.75
USP38Q8NB14 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.13□□□□□ -1.75
USP38Q8NB14 SNRPGP15-201ENST00000600149 222 ntBASIC4.13□□□□□ -1.75
USP38Q8NB14 XIAPP1-201ENST00000603162 600 ntBASIC4.13□□□□□ -1.75
USP38Q8NB14 AL590229.1-201ENST00000603497 542 ntBASIC4.13□□□□□ -1.75
USP38Q8NB14 AL137849.1-201ENST00000604767 169 ntBASIC4.13□□□□□ -1.75
USP38Q8NB14 AL596245.1-201ENST00000618994 362 ntBASIC4.13□□□□□ -1.75
USP38Q8NB14 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.13□□□□□ -1.75
USP38Q8NB14 AC006386.2-201ENST00000624491 75 ntBASIC4.13□□□□□ -1.75
USP38Q8NB14 AC012005.1-201ENST00000624575 75 ntBASIC4.13□□□□□ -1.75
USP38Q8NB14 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
USP38Q8NB14 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
USP38Q8NB14 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
USP38Q8NB14 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.13□□□□□ -1.75
USP38Q8NB14 ANKRD20A17P-201ENST00000511745 1330 ntBASIC4.13□□□□□ -1.75
USP38Q8NB14 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
USP38Q8NB14 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.12□□□□□ -1.75
USP38Q8NB14 AL365361.1-201ENST00000566942 3481 ntBASIC4.12□□□□□ -1.75
USP38Q8NB14 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
USP38Q8NB14 AC244517.1-201ENST00000606030 2086 ntBASIC4.12□□□□□ -1.75
USP38Q8NB14 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
USP38Q8NB14 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.12□□□□□ -1.75
USP38Q8NB14 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
USP38Q8NB14 SNORA38.1-201ENST00000364172 131 ntBASIC4.12□□□□□ -1.75
USP38Q8NB14 RNA5SP235-201ENST00000365411 114 ntBASIC4.12□□□□□ -1.75
USP38Q8NB14 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.12□□□□□ -1.75
USP38Q8NB14 U8.14-201ENST00000390843 143 ntBASIC4.12□□□□□ -1.75
USP38Q8NB14 SKINT1L-201ENST00000401057 817 ntBASIC4.12□□□□□ -1.75
USP38Q8NB14 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC4.12□□□□□ -1.75
USP38Q8NB14 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
USP38Q8NB14 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.12□□□□□ -1.75
USP38Q8NB14 BX119904.4-201ENST00000424402 301 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms