Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 RNU6-362P-201ENST00000516736 90 ntBASIC2.33□□□□□ -2.04
ZIC4Q8N9L1 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC2.33□□□□□ -2.04
ZIC4Q8N9L1 AC100870.1-201ENST00000522035 505 ntBASIC2.33□□□□□ -2.04
ZIC4Q8N9L1 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.33□□□□□ -2.04
ZIC4Q8N9L1 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
ZIC4Q8N9L1 HMGB1P6-201ENST00000569046 646 ntBASIC2.33□□□□□ -2.04
ZIC4Q8N9L1 MTCO1P40-201ENST00000574371 625 ntBASIC2.33□□□□□ -2.04
ZIC4Q8N9L1 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.33□□□□□ -2.04
ZIC4Q8N9L1 AC245036.5-201ENST00000596330 847 ntBASIC2.33□□□□□ -2.04
ZIC4Q8N9L1 AL035413.2-201ENST00000604801 525 ntBASIC2.33□□□□□ -2.04
ZIC4Q8N9L1 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.33□□□□□ -2.04
ZIC4Q8N9L1 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.33□□□□□ -2.04
ZIC4Q8N9L1 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
ZIC4Q8N9L1 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.33□□□□□ -2.04
ZIC4Q8N9L1 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.33□□□□□ -2.04
ZIC4Q8N9L1 AC233263.6-201ENST00000631132 1963 ntBASIC2.32□□□□□ -2.04
ZIC4Q8N9L1 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
ZIC4Q8N9L1 RNU6-859P-201ENST00000362728 107 ntBASIC2.32□□□□□ -2.04
ZIC4Q8N9L1 RNU6-799P-201ENST00000363567 107 ntBASIC2.32□□□□□ -2.04
ZIC4Q8N9L1 SNORA5B-201ENST00000363786 132 ntBASIC2.32□□□□□ -2.04
ZIC4Q8N9L1 MIR34A-201ENST00000385130 110 ntBASIC2.32□□□□□ -2.04
ZIC4Q8N9L1 USP9YP20-201ENST00000419224 558 ntBASIC2.32□□□□□ -2.04
ZIC4Q8N9L1 ATG3P1-201ENST00000419507 911 ntBASIC2.32□□□□□ -2.04
ZIC4Q8N9L1 NUP35P1-201ENST00000422734 947 ntBASIC2.32□□□□□ -2.04
ZIC4Q8N9L1 AC019097.1-201ENST00000424783 735 ntBASIC2.32□□□□□ -2.04
ZIC4Q8N9L1 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.32□□□□□ -2.04
ZIC4Q8N9L1 MTCO1P39-201ENST00000426148 480 ntBASIC2.32□□□□□ -2.04
ZIC4Q8N9L1 AC012497.1-201ENST00000429392 575 ntBASIC2.32□□□□□ -2.04
ZIC4Q8N9L1 AC005345.1-201ENST00000431868 217 ntBASIC2.32□□□□□ -2.04
ZIC4Q8N9L1 RPL36AP6-201ENST00000435770 321 ntBASIC2.32□□□□□ -2.04
ZIC4Q8N9L1 AC234064.1-201ENST00000436312 247 ntBASIC2.32□□□□□ -2.04
ZIC4Q8N9L1 AC004866.2-201ENST00000438285 481 ntBASIC2.32□□□□□ -2.04
ZIC4Q8N9L1 AL589880.1-201ENST00000448271 287 ntBASIC2.32□□□□□ -2.04
ZIC4Q8N9L1 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
ZIC4Q8N9L1 AL109933.2-201ENST00000452651 260 ntBASIC2.32□□□□□ -2.04
ZIC4Q8N9L1 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.32□□□□□ -2.04
ZIC4Q8N9L1 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.32□□□□□ -2.04
ZIC4Q8N9L1 RPL32P14-201ENST00000463196 378 ntBASIC2.32□□□□□ -2.04
ZIC4Q8N9L1 AC008571.1-201ENST00000467232 300 ntBASIC2.32□□□□□ -2.04
ZIC4Q8N9L1 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
ZIC4Q8N9L1 CBX3P3-201ENST00000508108 532 ntBASIC2.32□□□□□ -2.04
ZIC4Q8N9L1 AC112518.2-201ENST00000508565 425 ntBASIC2.32□□□□□ -2.04
ZIC4Q8N9L1 AC096725.1-201ENST00000514266 313 ntBASIC2.32□□□□□ -2.04
ZIC4Q8N9L1 RNU6-1095P-201ENST00000516148 108 ntBASIC2.32□□□□□ -2.04
ZIC4Q8N9L1 RNA5SP135-201ENST00000517019 125 ntBASIC2.32□□□□□ -2.04
ZIC4Q8N9L1 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.32□□□□□ -2.04
ZIC4Q8N9L1 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.32□□□□□ -2.04
ZIC4Q8N9L1 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.32□□□□□ -2.04
ZIC4Q8N9L1 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.32□□□□□ -2.04
ZIC4Q8N9L1 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
ZIC4Q8N9L1 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.32□□□□□ -2.04
ZIC4Q8N9L1 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.32□□□□□ -2.04
ZIC4Q8N9L1 MED28P6-201ENST00000558776 231 ntBASIC2.32□□□□□ -2.04
ZIC4Q8N9L1 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.32□□□□□ -2.04
ZIC4Q8N9L1 SULT1C2P1-202ENST00000562418 459 ntBASIC2.32□□□□□ -2.04
ZIC4Q8N9L1 AC093519.1-201ENST00000566109 298 ntBASIC2.32□□□□□ -2.04
ZIC4Q8N9L1 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.32□□□□□ -2.04
ZIC4Q8N9L1 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
ZIC4Q8N9L1 RN7SL622P-201ENST00000585292 275 ntBASIC2.32□□□□□ -2.04
ZIC4Q8N9L1 AF131215.7-201ENST00000602443 707 ntBASIC2.32□□□□□ -2.04
ZIC4Q8N9L1 AP002906.1-201ENST00000603405 233 ntBASIC2.32□□□□□ -2.04
ZIC4Q8N9L1 OR2AS2P-201ENST00000606902 342 ntBASIC2.32□□□□□ -2.04
ZIC4Q8N9L1 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC2.32□□□□□ -2.04
ZIC4Q8N9L1 AC006249.1-201ENST00000621223 471 ntBASIC2.32□□□□□ -2.04
ZIC4Q8N9L1 AL353748.2-201ENST00000622148 471 ntBASIC2.32□□□□□ -2.04
ZIC4Q8N9L1 AP006248.3-201ENST00000623580 594 ntBASIC2.32□□□□□ -2.04
ZIC4Q8N9L1 AL512506.2-201ENST00000624472 458 ntBASIC2.32□□□□□ -2.04
ZIC4Q8N9L1 MFSD8-245ENST00000641743 948 ntBASIC2.32□□□□□ -2.04
ZIC4Q8N9L1 AC091564.4-201ENST00000533934 2194 ntBASIC2.32□□□□□ -2.04
ZIC4Q8N9L1 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
ZIC4Q8N9L1 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
ZIC4Q8N9L1 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
ZIC4Q8N9L1 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
ZIC4Q8N9L1 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.31□□□□□ -2.04
ZIC4Q8N9L1 OR1L1-202ENST00000373686 1083 ntBASIC2.31□□□□□ -2.04
ZIC4Q8N9L1 SNORA51.6-201ENST00000384151 125 ntBASIC2.31□□□□□ -2.04
ZIC4Q8N9L1 MIR493-201ENST00000385254 89 ntBASIC2.31□□□□□ -2.04
ZIC4Q8N9L1 RNA5SP184-201ENST00000411071 108 ntBASIC2.31□□□□□ -2.04
ZIC4Q8N9L1 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC2.31□□□□□ -2.04
ZIC4Q8N9L1 AL513175.2-201ENST00000422071 443 ntBASIC2.31□□□□□ -2.04
ZIC4Q8N9L1 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.31□□□□□ -2.04
ZIC4Q8N9L1 RPL31P54-201ENST00000429803 370 ntBASIC2.31□□□□□ -2.04
ZIC4Q8N9L1 AL512661.1-201ENST00000434586 1253 ntBASIC2.31□□□□□ -2.04
ZIC4Q8N9L1 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC2.31□□□□□ -2.04
ZIC4Q8N9L1 RPL23AP74-201ENST00000437246 471 ntBASIC2.31□□□□□ -2.04
ZIC4Q8N9L1 OR6K5P-201ENST00000447050 945 ntBASIC2.31□□□□□ -2.04
ZIC4Q8N9L1 AL050341.1-201ENST00000447743 313 ntBASIC2.31□□□□□ -2.04
ZIC4Q8N9L1 CACYBPP2-201ENST00000453625 678 ntBASIC2.31□□□□□ -2.04
ZIC4Q8N9L1 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.31□□□□□ -2.04
ZIC4Q8N9L1 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.31□□□□□ -2.04
ZIC4Q8N9L1 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.31□□□□□ -2.04
ZIC4Q8N9L1 RNU6-56P-201ENST00000516986 93 ntBASIC2.31□□□□□ -2.04
ZIC4Q8N9L1 AC004486.1-201ENST00000546846 233 ntBASIC2.31□□□□□ -2.04
ZIC4Q8N9L1 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.31□□□□□ -2.04
ZIC4Q8N9L1 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC2.31□□□□□ -2.04
ZIC4Q8N9L1 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.31□□□□□ -2.04
ZIC4Q8N9L1 AC002487.1-201ENST00000604565 994 ntBASIC2.31□□□□□ -2.04
ZIC4Q8N9L1 AP000676.4-201ENST00000624659 623 ntBASIC2.31□□□□□ -2.04
ZIC4Q8N9L1 AC091925.2-201ENST00000625059 256 ntBASIC2.31□□□□□ -2.04
ZIC4Q8N9L1 BX649567.1-201ENST00000642071 1134 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms