Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 MIR153-1-201ENST00000384914 90 ntBASIC2.74□□□□□ -1.97
VPS8Q8N3P4 AC048351.1-201ENST00000420064 602 ntBASIC2.74□□□□□ -1.97
VPS8Q8N3P4 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.74□□□□□ -1.97
VPS8Q8N3P4 MTCO3P21-201ENST00000430791 643 ntBASIC2.74□□□□□ -1.97
VPS8Q8N3P4 SSXP4-201ENST00000451349 245 ntBASIC2.74□□□□□ -1.97
VPS8Q8N3P4 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC2.74□□□□□ -1.97
VPS8Q8N3P4 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.74□□□□□ -1.97
VPS8Q8N3P4 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.74□□□□□ -1.97
VPS8Q8N3P4 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.74□□□□□ -1.97
VPS8Q8N3P4 RPL21P75-201ENST00000396599 483 ntBASIC2.73□□□□□ -1.97
VPS8Q8N3P4 RPL21P28-201ENST00000401418 483 ntBASIC2.73□□□□□ -1.97
VPS8Q8N3P4 AL592114.1-201ENST00000403842 483 ntBASIC2.73□□□□□ -1.97
VPS8Q8N3P4 SUMO2P12-201ENST00000405924 140 ntBASIC2.73□□□□□ -1.97
VPS8Q8N3P4 RNA5SP489-201ENST00000410986 109 ntBASIC2.73□□□□□ -1.97
VPS8Q8N3P4 RFESDP1-201ENST00000422350 461 ntBASIC2.73□□□□□ -1.97
VPS8Q8N3P4 RPL21P39-201ENST00000463605 483 ntBASIC2.73□□□□□ -1.97
VPS8Q8N3P4 AC011979.1-201ENST00000472300 483 ntBASIC2.73□□□□□ -1.97
VPS8Q8N3P4 HMGN2P13-201ENST00000476476 274 ntBASIC2.73□□□□□ -1.97
VPS8Q8N3P4 RPL21P93-201ENST00000480465 489 ntBASIC2.73□□□□□ -1.97
VPS8Q8N3P4 AC233702.1-201ENST00000482905 502 ntBASIC2.73□□□□□ -1.97
VPS8Q8N3P4 AC093591.1-201ENST00000491435 481 ntBASIC2.73□□□□□ -1.97
VPS8Q8N3P4 RPL21P16-201ENST00000495531 483 ntBASIC2.73□□□□□ -1.97
VPS8Q8N3P4 AC091917.2-201ENST00000505002 744 ntBASIC2.73□□□□□ -1.97
VPS8Q8N3P4 OR5H4P-201ENST00000510851 923 ntBASIC2.73□□□□□ -1.97
VPS8Q8N3P4 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.73□□□□□ -1.97
VPS8Q8N3P4 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.73□□□□□ -1.97
VPS8Q8N3P4 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.73□□□□□ -1.97
VPS8Q8N3P4 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC2.73□□□□□ -1.97
VPS8Q8N3P4 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
VPS8Q8N3P4 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.73□□□□□ -1.97
VPS8Q8N3P4 AC010678.1-201ENST00000614118 713 ntBASIC2.73□□□□□ -1.97
VPS8Q8N3P4 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
VPS8Q8N3P4 UBE2L2-201ENST00000254302 429 ntBASIC2.72□□□□□ -1.97
VPS8Q8N3P4 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
VPS8Q8N3P4 SRIP2-201ENST00000428470 166 ntBASIC2.72□□□□□ -1.97
VPS8Q8N3P4 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.72□□□□□ -1.97
VPS8Q8N3P4 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.72□□□□□ -1.97
VPS8Q8N3P4 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.72□□□□□ -1.97
VPS8Q8N3P4 MIR4419B-201ENST00000577260 68 ntBASIC2.72□□□□□ -1.97
VPS8Q8N3P4 RPL23AP88-201ENST00000605759 454 ntBASIC2.72□□□□□ -1.97
VPS8Q8N3P4 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.72□□□□□ -1.97
VPS8Q8N3P4 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.72□□□□□ -1.97
VPS8Q8N3P4 OR4G2P-202ENST00000641004 1759 ntBASIC2.72□□□□□ -1.97
VPS8Q8N3P4 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.72□□□□□ -1.97
VPS8Q8N3P4 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.71□□□□□ -1.97
VPS8Q8N3P4 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.71□□□□□ -1.98
VPS8Q8N3P4 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
VPS8Q8N3P4 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.71□□□□□ -1.98
VPS8Q8N3P4 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
VPS8Q8N3P4 OR4K11P-201ENST00000431829 904 ntBASIC2.71□□□□□ -1.98
VPS8Q8N3P4 OR51B8P-201ENST00000449892 769 ntBASIC2.71□□□□□ -1.98
VPS8Q8N3P4 AC104564.1-201ENST00000493028 407 ntBASIC2.71□□□□□ -1.98
VPS8Q8N3P4 MTCYBP37-201ENST00000510642 1133 ntBASIC2.71□□□□□ -1.98
VPS8Q8N3P4 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.71□□□□□ -1.98
VPS8Q8N3P4 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.71□□□□□ -1.98
VPS8Q8N3P4 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
VPS8Q8N3P4 MTND4LP21-201ENST00000415303 295 ntBASIC2.7□□□□□ -1.98
VPS8Q8N3P4 SPA17P1-201ENST00000416656 452 ntBASIC2.7□□□□□ -1.98
VPS8Q8N3P4 AL645568.3-201ENST00000433683 316 ntBASIC2.7□□□□□ -1.98
VPS8Q8N3P4 AL353898.1-201ENST00000444055 238 ntBASIC2.7□□□□□ -1.98
VPS8Q8N3P4 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
VPS8Q8N3P4 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.7□□□□□ -1.98
VPS8Q8N3P4 AC007375.1-201ENST00000554513 578 ntBASIC2.7□□□□□ -1.98
VPS8Q8N3P4 AC105429.2-201ENST00000610567 517 ntBASIC2.7□□□□□ -1.98
VPS8Q8N3P4 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.7□□□□□ -1.98
VPS8Q8N3P4 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.7□□□□□ -1.98
VPS8Q8N3P4 RNA5SP190-201ENST00000365222 118 ntBASIC2.69□□□□□ -1.98
VPS8Q8N3P4 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.69□□□□□ -1.98
VPS8Q8N3P4 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.69□□□□□ -1.98
VPS8Q8N3P4 XKRYP6-201ENST00000440468 1116 ntBASIC2.69□□□□□ -1.98
VPS8Q8N3P4 XKRYP3-201ENST00000442113 1116 ntBASIC2.69□□□□□ -1.98
VPS8Q8N3P4 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC2.69□□□□□ -1.98
VPS8Q8N3P4 HMGN2P16-201ENST00000456802 261 ntBASIC2.69□□□□□ -1.98
VPS8Q8N3P4 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.69□□□□□ -1.98
VPS8Q8N3P4 AC104581.2-201ENST00000572227 430 ntBASIC2.69□□□□□ -1.98
VPS8Q8N3P4 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.69□□□□□ -1.98
VPS8Q8N3P4 AC006023.2-201ENST00000609916 167 ntBASIC2.69□□□□□ -1.98
VPS8Q8N3P4 AC108479.2-201ENST00000617314 601 ntBASIC2.69□□□□□ -1.98
VPS8Q8N3P4 AC006065.5-201ENST00000623427 349 ntBASIC2.69□□□□□ -1.98
VPS8Q8N3P4 CNOT6LP1-201ENST00000559681 1462 ntBASIC2.69□□□□□ -1.98
VPS8Q8N3P4 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
VPS8Q8N3P4 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
VPS8Q8N3P4 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
VPS8Q8N3P4 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.68□□□□□ -1.98
VPS8Q8N3P4 NPM1P10-201ENST00000398310 865 ntBASIC2.68□□□□□ -1.98
VPS8Q8N3P4 CCNB2P1-201ENST00000399411 1150 ntBASIC2.68□□□□□ -1.98
VPS8Q8N3P4 TOMM22P1-201ENST00000418578 312 ntBASIC2.68□□□□□ -1.98
VPS8Q8N3P4 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.68□□□□□ -1.98
VPS8Q8N3P4 RPL17P49-201ENST00000443728 411 ntBASIC2.68□□□□□ -1.98
VPS8Q8N3P4 TPT1P14-201ENST00000448018 505 ntBASIC2.68□□□□□ -1.98
VPS8Q8N3P4 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC2.68□□□□□ -1.98
VPS8Q8N3P4 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
VPS8Q8N3P4 AC011611.5-201ENST00000552477 578 ntBASIC2.68□□□□□ -1.98
VPS8Q8N3P4 AL109653.1-201ENST00000603091 248 ntBASIC2.68□□□□□ -1.98
VPS8Q8N3P4 MIR8081-201ENST00000611533 95 ntBASIC2.68□□□□□ -1.98
VPS8Q8N3P4 AC012150.2-201ENST00000621300 544 ntBASIC2.68□□□□□ -1.98
VPS8Q8N3P4 AC010733.2-201ENST00000589496 5702 ntBASIC2.68□□□□□ -1.98
VPS8Q8N3P4 RNU6-600P-201ENST00000362524 99 ntBASIC2.68□□□□□ -1.98
VPS8Q8N3P4 MIR607-201ENST00000385241 96 ntBASIC2.68□□□□□ -1.98
VPS8Q8N3P4 VN1R31P-201ENST00000417498 730 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms