Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 RPL9P9-202ENST00000466501 579 ntBASIC5.59□□□□□ -1.51
CCDC116Q8IYX3 RN7SL269P-201ENST00000467795 305 ntBASIC5.59□□□□□ -1.51
CCDC116Q8IYX3 AC092865.4-201ENST00000477936 615 ntBASIC5.59□□□□□ -1.51
CCDC116Q8IYX3 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC116Q8IYX3 TRBV5-2-201ENST00000489095 273 ntBASIC5.59□□□□□ -1.51
CCDC116Q8IYX3 RN7SKP238-201ENST00000516483 249 ntBASIC5.59□□□□□ -1.51
CCDC116Q8IYX3 IGHVII-62-1-201ENST00000519283 235 ntBASIC5.59□□□□□ -1.51
CCDC116Q8IYX3 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.59□□□□□ -1.51
CCDC116Q8IYX3 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.59□□□□□ -1.51
CCDC116Q8IYX3 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC5.59□□□□□ -1.51
CCDC116Q8IYX3 AC098826.3-201ENST00000603823 466 ntBASIC5.59□□□□□ -1.51
CCDC116Q8IYX3 AC073657.2-201ENST00000605661 303 ntBASIC5.59□□□□□ -1.51
CCDC116Q8IYX3 AC092266.1-201ENST00000610958 165 ntBASIC5.59□□□□□ -1.51
CCDC116Q8IYX3 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC116Q8IYX3 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC116Q8IYX3 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CCDC116Q8IYX3 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
CCDC116Q8IYX3 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.59□□□□□ -1.52
CCDC116Q8IYX3 AC005224.3-201ENST00000584683 2140 ntBASIC5.59□□□□□ -1.52
CCDC116Q8IYX3 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.59□□□□□ -1.52
CCDC116Q8IYX3 MAPK10-338ENST00000641647 3362 ntBASIC5.58□□□□□ -1.52
CCDC116Q8IYX3 PARP4P2-201ENST00000446672 3326 ntBASIC5.58□□□□□ -1.52
CCDC116Q8IYX3 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC116Q8IYX3 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC116Q8IYX3 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC116Q8IYX3 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
CCDC116Q8IYX3 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC116Q8IYX3 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC116Q8IYX3 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC116Q8IYX3 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC116Q8IYX3 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC116Q8IYX3 RNU6-989P-201ENST00000362756 107 ntBASIC5.58□□□□□ -1.52
CCDC116Q8IYX3 RNU1-65P-201ENST00000363919 148 ntBASIC5.58□□□□□ -1.52
CCDC116Q8IYX3 Y_RNA.304-201ENST00000365011 112 ntBASIC5.58□□□□□ -1.52
CCDC116Q8IYX3 RNU6-1117P-201ENST00000384525 104 ntBASIC5.58□□□□□ -1.52
CCDC116Q8IYX3 AC013442.1-201ENST00000397347 228 ntBASIC5.58□□□□□ -1.52
CCDC116Q8IYX3 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC116Q8IYX3 RNU2-51P-201ENST00000410708 197 ntBASIC5.58□□□□□ -1.52
CCDC116Q8IYX3 AL353621.1-201ENST00000418219 243 ntBASIC5.58□□□□□ -1.52
CCDC116Q8IYX3 AL391219.1-201ENST00000422570 483 ntBASIC5.58□□□□□ -1.52
CCDC116Q8IYX3 TMEM167AP1-201ENST00000423409 219 ntBASIC5.58□□□□□ -1.52
CCDC116Q8IYX3 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC116Q8IYX3 BX679664.1-201ENST00000434429 253 ntBASIC5.58□□□□□ -1.52
CCDC116Q8IYX3 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC116Q8IYX3 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC116Q8IYX3 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC116Q8IYX3 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.58□□□□□ -1.52
CCDC116Q8IYX3 RN7SL168P-201ENST00000463821 279 ntBASIC5.58□□□□□ -1.52
CCDC116Q8IYX3 RPL21P104-201ENST00000464143 478 ntBASIC5.58□□□□□ -1.52
CCDC116Q8IYX3 RPL23AP2-201ENST00000471227 466 ntBASIC5.58□□□□□ -1.52
CCDC116Q8IYX3 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.58□□□□□ -1.52
CCDC116Q8IYX3 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC116Q8IYX3 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC116Q8IYX3 Y_RNA.662-201ENST00000516028 97 ntBASIC5.58□□□□□ -1.52
CCDC116Q8IYX3 MTND5P41-201ENST00000517498 206 ntBASIC5.58□□□□□ -1.52
CCDC116Q8IYX3 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC116Q8IYX3 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.58□□□□□ -1.52
CCDC116Q8IYX3 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.58□□□□□ -1.52
CCDC116Q8IYX3 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC116Q8IYX3 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC116Q8IYX3 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC116Q8IYX3 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC116Q8IYX3 CENPF-206ENST00000614578 528 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC116Q8IYX3 AL365265.1-201ENST00000621045 234 ntBASIC5.58□□□□□ -1.52
CCDC116Q8IYX3 AL136228.1-201ENST00000622221 319 ntBASIC5.58□□□□□ -1.52
CCDC116Q8IYX3 AP001052.1-201ENST00000626421 99 ntBASIC5.58□□□□□ -1.52
CCDC116Q8IYX3 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC116Q8IYX3 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.58□□□□□ -1.52
CCDC116Q8IYX3 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
CCDC116Q8IYX3 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
CCDC116Q8IYX3 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
CCDC116Q8IYX3 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC116Q8IYX3 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
CCDC116Q8IYX3 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
CCDC116Q8IYX3 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC116Q8IYX3 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
CCDC116Q8IYX3 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC116Q8IYX3 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC116Q8IYX3 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC116Q8IYX3 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC116Q8IYX3 AC109446.4-201ENST00000623235 2755 ntBASIC5.57□□□□□ -1.52
CCDC116Q8IYX3 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC116Q8IYX3 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC116Q8IYX3 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.57□□□□□ -1.52
CCDC116Q8IYX3 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC116Q8IYX3 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC116Q8IYX3 RNU6-1290P-201ENST00000362957 109 ntBASIC5.57□□□□□ -1.52
CCDC116Q8IYX3 RNA5SP211-201ENST00000365516 117 ntBASIC5.57□□□□□ -1.52
CCDC116Q8IYX3 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CCDC116Q8IYX3 RPL21P75-201ENST00000396599 483 ntBASIC5.57□□□□□ -1.52
CCDC116Q8IYX3 RPL21P28-201ENST00000401418 483 ntBASIC5.57□□□□□ -1.52
CCDC116Q8IYX3 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.57□□□□□ -1.52
CCDC116Q8IYX3 AC063979.1-201ENST00000415539 377 ntBASIC5.57□□□□□ -1.52
CCDC116Q8IYX3 AL590556.1-201ENST00000423231 483 ntBASIC5.57□□□□□ -1.52
CCDC116Q8IYX3 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC116Q8IYX3 AL591043.1-201ENST00000432461 424 ntBASIC5.57□□□□□ -1.52
CCDC116Q8IYX3 AC007389.2-201ENST00000434630 306 ntBASIC5.57□□□□□ -1.52
CCDC116Q8IYX3 AL663074.2-201ENST00000440621 479 ntBASIC5.57□□□□□ -1.52
CCDC116Q8IYX3 PRDX3P3-201ENST00000447765 522 ntBASIC5.57□□□□□ -1.52
CCDC116Q8IYX3 AC005077.1-201ENST00000449226 375 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms