Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HERC6Q8IVU3 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HERC6Q8IVU3 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.09□□□□□ -1.75
HERC6Q8IVU3 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.09□□□□□ -1.75
HERC6Q8IVU3 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HERC6Q8IVU3 RNU6-1155P-201ENST00000363554 107 ntBASIC4.09□□□□□ -1.75
HERC6Q8IVU3 RNU6-173P-201ENST00000364215 104 ntBASIC4.09□□□□□ -1.75
HERC6Q8IVU3 SNORA48.2-201ENST00000390926 124 ntBASIC4.09□□□□□ -1.75
HERC6Q8IVU3 AL603766.1-201ENST00000407763 664 ntBASIC4.09□□□□□ -1.75
HERC6Q8IVU3 AL359704.1-201ENST00000411586 781 ntBASIC4.09□□□□□ -1.75
HERC6Q8IVU3 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HERC6Q8IVU3 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.09□□□□□ -1.75
HERC6Q8IVU3 AL365338.1-201ENST00000422282 858 ntBASIC4.09□□□□□ -1.75
HERC6Q8IVU3 AC109583.1-201ENST00000432156 268 ntBASIC4.09□□□□□ -1.75
HERC6Q8IVU3 RPL7P28-201ENST00000437739 740 ntBASIC4.09□□□□□ -1.75
HERC6Q8IVU3 HMGB1P37-201ENST00000439613 609 ntBASIC4.09□□□□□ -1.75
HERC6Q8IVU3 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.09□□□□□ -1.75
HERC6Q8IVU3 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.09□□□□□ -1.75
HERC6Q8IVU3 AC115115.1-201ENST00000449927 248 ntBASIC4.09□□□□□ -1.75
HERC6Q8IVU3 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.09□□□□□ -1.75
HERC6Q8IVU3 RPS27AP8-201ENST00000452665 445 ntBASIC4.09□□□□□ -1.75
HERC6Q8IVU3 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC4.09□□□□□ -1.75
HERC6Q8IVU3 SNRPFP4-201ENST00000456366 242 ntBASIC4.09□□□□□ -1.75
HERC6Q8IVU3 RPL21P104-201ENST00000464143 478 ntBASIC4.09□□□□□ -1.75
HERC6Q8IVU3 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.09□□□□□ -1.75
HERC6Q8IVU3 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.09□□□□□ -1.75
HERC6Q8IVU3 AC004062.1-201ENST00000509926 645 ntBASIC4.09□□□□□ -1.75
HERC6Q8IVU3 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.09□□□□□ -1.75
HERC6Q8IVU3 RNU6-528P-201ENST00000516926 100 ntBASIC4.09□□□□□ -1.75
HERC6Q8IVU3 RNU6-1073P-201ENST00000517182 106 ntBASIC4.09□□□□□ -1.75
HERC6Q8IVU3 AC025881.1-201ENST00000518851 512 ntBASIC4.09□□□□□ -1.75
HERC6Q8IVU3 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC4.09□□□□□ -1.75
HERC6Q8IVU3 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC4.09□□□□□ -1.75
HERC6Q8IVU3 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.09□□□□□ -1.75
HERC6Q8IVU3 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.09□□□□□ -1.75
HERC6Q8IVU3 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.09□□□□□ -1.75
HERC6Q8IVU3 AC020914.4-201ENST00000597690 277 ntBASIC4.09□□□□□ -1.75
HERC6Q8IVU3 AC010591.1-201ENST00000603941 649 ntBASIC4.09□□□□□ -1.75
HERC6Q8IVU3 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HERC6Q8IVU3 HMGB1P50-201ENST00000605814 607 ntBASIC4.09□□□□□ -1.75
HERC6Q8IVU3 AC006023.2-201ENST00000609916 167 ntBASIC4.09□□□□□ -1.75
HERC6Q8IVU3 AC073114.1-201ENST00000612027 490 ntBASIC4.09□□□□□ -1.75
HERC6Q8IVU3 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
HERC6Q8IVU3 AC008725.1-201ENST00000605123 2263 ntBASIC4.09□□□□□ -1.76
HERC6Q8IVU3 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.08□□□□□ -1.76
HERC6Q8IVU3 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HERC6Q8IVU3 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HERC6Q8IVU3 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HERC6Q8IVU3 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
HERC6Q8IVU3 RNU6-1078P-201ENST00000364522 103 ntBASIC4.08□□□□□ -1.76
HERC6Q8IVU3 SNORD116-9-201ENST00000384000 95 ntBASIC4.08□□□□□ -1.76
HERC6Q8IVU3 SNORD116-3-201ENST00000384287 95 ntBASIC4.08□□□□□ -1.76
HERC6Q8IVU3 SNORD116-7-201ENST00000384404 95 ntBASIC4.08□□□□□ -1.76
HERC6Q8IVU3 SNORD116-5-201ENST00000384462 95 ntBASIC4.08□□□□□ -1.76
HERC6Q8IVU3 SNORA26.8-201ENST00000391306 124 ntBASIC4.08□□□□□ -1.76
HERC6Q8IVU3 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.08□□□□□ -1.76
HERC6Q8IVU3 CYCSP4-201ENST00000429682 331 ntBASIC4.08□□□□□ -1.76
HERC6Q8IVU3 AL513185.3-201ENST00000433335 1300 ntBASIC4.08□□□□□ -1.76
HERC6Q8IVU3 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.08□□□□□ -1.76
HERC6Q8IVU3 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.08□□□□□ -1.76
HERC6Q8IVU3 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.08□□□□□ -1.76
HERC6Q8IVU3 COX6CP2-201ENST00000444980 225 ntBASIC4.08□□□□□ -1.76
HERC6Q8IVU3 MTND2P4-201ENST00000445034 1004 ntBASIC4.08□□□□□ -1.76
HERC6Q8IVU3 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.08□□□□□ -1.76
HERC6Q8IVU3 snoU13.4-201ENST00000458916 104 ntBASIC4.08□□□□□ -1.76
HERC6Q8IVU3 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.08□□□□□ -1.76
HERC6Q8IVU3 RPL7P23-201ENST00000493874 747 ntBASIC4.08□□□□□ -1.76
HERC6Q8IVU3 KLHL2P1-201ENST00000508691 521 ntBASIC4.08□□□□□ -1.76
HERC6Q8IVU3 AC017037.2-201ENST00000513850 890 ntBASIC4.08□□□□□ -1.76
HERC6Q8IVU3 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.08□□□□□ -1.76
HERC6Q8IVU3 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.08□□□□□ -1.76
HERC6Q8IVU3 AC087481.2-201ENST00000565492 330 ntBASIC4.08□□□□□ -1.76
HERC6Q8IVU3 AL360157.1-201ENST00000565962 87 ntBASIC4.08□□□□□ -1.76
HERC6Q8IVU3 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.08□□□□□ -1.76
HERC6Q8IVU3 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC4.08□□□□□ -1.76
HERC6Q8IVU3 AL022161.1-201ENST00000604390 213 ntBASIC4.08□□□□□ -1.76
HERC6Q8IVU3 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HERC6Q8IVU3 AL031775.1-201ENST00000607014 887 ntBASIC4.08□□□□□ -1.76
HERC6Q8IVU3 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC4.08□□□□□ -1.76
HERC6Q8IVU3 AC004825.2-201ENST00000616634 455 ntBASIC4.08□□□□□ -1.76
HERC6Q8IVU3 AC009268.2-201ENST00000621925 457 ntBASIC4.08□□□□□ -1.76
HERC6Q8IVU3 AC011460.1-201ENST00000636268 1834 ntBASIC4.08□□□□□ -1.76
HERC6Q8IVU3 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.08□□□□□ -1.76
HERC6Q8IVU3 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HERC6Q8IVU3 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HERC6Q8IVU3 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
HERC6Q8IVU3 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HERC6Q8IVU3 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HERC6Q8IVU3 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HERC6Q8IVU3 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
HERC6Q8IVU3 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.07□□□□□ -1.76
HERC6Q8IVU3 AC095050.2-201ENST00000510748 1458 ntBASIC4.07□□□□□ -1.76
HERC6Q8IVU3 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HERC6Q8IVU3 FAM35DP-201ENST00000323387 2712 ntBASIC4.07□□□□□ -1.76
HERC6Q8IVU3 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HERC6Q8IVU3 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
HERC6Q8IVU3 MTND1P21-201ENST00000412991 285 ntBASIC4.07□□□□□ -1.76
HERC6Q8IVU3 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.07□□□□□ -1.76
HERC6Q8IVU3 SEPT2P1-201ENST00000419651 180 ntBASIC4.07□□□□□ -1.76
HERC6Q8IVU3 AC244035.1-201ENST00000430042 390 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms