Protein–RNA interactions for Protein: Q86TS7

LINC00643, Putative UPF0730 protein encoded by LINC00643, humanhuman

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643Q86TS7 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.15□□□□□ -2.23
LINC00643Q86TS7 MTCYBP29-201ENST00000436327 1006 ntBASIC1.15□□□□□ -2.23
LINC00643Q86TS7 ARPC3P1-201ENST00000437218 533 ntBASIC1.15□□□□□ -2.23
LINC00643Q86TS7 AL353689.1-201ENST00000438895 199 ntBASIC1.15□□□□□ -2.23
LINC00643Q86TS7 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.15□□□□□ -2.23
LINC00643Q86TS7 RPS26P30-201ENST00000443431 335 ntBASIC1.15□□□□□ -2.23
LINC00643Q86TS7 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.15□□□□□ -2.23
LINC00643Q86TS7 RPS29P26-201ENST00000477483 171 ntBASIC1.15□□□□□ -2.23
LINC00643Q86TS7 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC1.15□□□□□ -2.23
LINC00643Q86TS7 AC108157.1-201ENST00000510511 539 ntBASIC1.15□□□□□ -2.23
LINC00643Q86TS7 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.15□□□□□ -2.23
LINC00643Q86TS7 IGHVII-62-1-201ENST00000519283 235 ntBASIC1.15□□□□□ -2.23
LINC00643Q86TS7 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC1.15□□□□□ -2.23
LINC00643Q86TS7 AC007375.1-201ENST00000554513 578 ntBASIC1.15□□□□□ -2.23
LINC00643Q86TS7 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.15□□□□□ -2.23
LINC00643Q86TS7 MIR4284-201ENST00000578924 81 ntBASIC1.15□□□□□ -2.23
LINC00643Q86TS7 MIR3609-201ENST00000582661 80 ntBASIC1.15□□□□□ -2.23
LINC00643Q86TS7 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC1.15□□□□□ -2.23
LINC00643Q86TS7 AC079089.3-201ENST00000603094 673 ntBASIC1.15□□□□□ -2.23
LINC00643Q86TS7 AC002487.1-201ENST00000604565 994 ntBASIC1.15□□□□□ -2.23
LINC00643Q86TS7 AL009028.1-201ENST00000604895 802 ntBASIC1.15□□□□□ -2.23
LINC00643Q86TS7 AC124312.4-201ENST00000605533 310 ntBASIC1.15□□□□□ -2.23
LINC00643Q86TS7 MIR6861-201ENST00000618657 64 ntBASIC1.15□□□□□ -2.23
LINC00643Q86TS7 AC092608.2-201ENST00000624427 218 ntBASIC1.15□□□□□ -2.23
LINC00643Q86TS7 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC1.15□□□□□ -2.23
LINC00643Q86TS7 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
LINC00643Q86TS7 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
LINC00643Q86TS7 OR5H2-201ENST00000355273 945 ntBASIC1.14□□□□□ -2.23
LINC00643Q86TS7 RNU5D-1-201ENST00000363299 116 ntBASIC1.14□□□□□ -2.23
LINC00643Q86TS7 SNORA70.4-201ENST00000365509 134 ntBASIC1.14□□□□□ -2.23
LINC00643Q86TS7 MIR493-201ENST00000385254 89 ntBASIC1.14□□□□□ -2.23
LINC00643Q86TS7 CISD1P1-201ENST00000393907 327 ntBASIC1.14□□□□□ -2.23
LINC00643Q86TS7 AL360182.1-201ENST00000397433 468 ntBASIC1.14□□□□□ -2.23
LINC00643Q86TS7 AL356432.1-201ENST00000405809 419 ntBASIC1.14□□□□□ -2.23
LINC00643Q86TS7 MIR1282-201ENST00000408865 101 ntBASIC1.14□□□□□ -2.23
LINC00643Q86TS7 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.14□□□□□ -2.23
LINC00643Q86TS7 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
LINC00643Q86TS7 EIF1AXP1-201ENST00000419267 435 ntBASIC1.14□□□□□ -2.23
LINC00643Q86TS7 RPA2P2-201ENST00000419698 796 ntBASIC1.14□□□□□ -2.23
LINC00643Q86TS7 AC003685.2-201ENST00000422795 395 ntBASIC1.14□□□□□ -2.23
LINC00643Q86TS7 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
LINC00643Q86TS7 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.14□□□□□ -2.23
LINC00643Q86TS7 AC092017.2-201ENST00000427600 362 ntBASIC1.14□□□□□ -2.23
LINC00643Q86TS7 RPL7L1P10-201ENST00000427790 463 ntBASIC1.14□□□□□ -2.23
LINC00643Q86TS7 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC1.14□□□□□ -2.23
LINC00643Q86TS7 HMGB1P5-202ENST00000451497 985 ntBASIC1.14□□□□□ -2.23
LINC00643Q86TS7 BX248409.1-201ENST00000455497 255 ntBASIC1.14□□□□□ -2.23
LINC00643Q86TS7 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
LINC00643Q86TS7 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.14□□□□□ -2.23
LINC00643Q86TS7 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC1.14□□□□□ -2.23
LINC00643Q86TS7 AC087588.1-201ENST00000462203 316 ntBASIC1.14□□□□□ -2.23
LINC00643Q86TS7 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC1.14□□□□□ -2.23
LINC00643Q86TS7 AC087884.1-201ENST00000469738 328 ntBASIC1.14□□□□□ -2.23
LINC00643Q86TS7 NDUFA5P9-201ENST00000472609 340 ntBASIC1.14□□□□□ -2.23
LINC00643Q86TS7 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC1.14□□□□□ -2.23
LINC00643Q86TS7 AC026801.1-201ENST00000497178 464 ntBASIC1.14□□□□□ -2.23
LINC00643Q86TS7 MTCYBP17-201ENST00000503579 789 ntBASIC1.14□□□□□ -2.23
LINC00643Q86TS7 AC234781.5-201ENST00000508429 271 ntBASIC1.14□□□□□ -2.23
LINC00643Q86TS7 AC091965.2-201ENST00000512324 613 ntBASIC1.14□□□□□ -2.23
LINC00643Q86TS7 SNORA31.13-201ENST00000516624 135 ntBASIC1.14□□□□□ -2.23
LINC00643Q86TS7 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.14□□□□□ -2.23
LINC00643Q86TS7 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC1.14□□□□□ -2.23
LINC00643Q86TS7 AC079600.2-201ENST00000550076 130 ntBASIC1.14□□□□□ -2.23
LINC00643Q86TS7 CYCSP2-201ENST00000558168 301 ntBASIC1.14□□□□□ -2.23
LINC00643Q86TS7 AC053481.3-201ENST00000577881 843 ntBASIC1.14□□□□□ -2.23
LINC00643Q86TS7 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.14□□□□□ -2.23
LINC00643Q86TS7 AC017100.2-201ENST00000584628 355 ntBASIC1.14□□□□□ -2.23
LINC00643Q86TS7 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC1.14□□□□□ -2.23
LINC00643Q86TS7 AL359535.1-201ENST00000612100 1087 ntBASIC1.14□□□□□ -2.23
LINC00643Q86TS7 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
LINC00643Q86TS7 AL121772.2-201ENST00000614331 297 ntBASIC1.14□□□□□ -2.23
LINC00643Q86TS7 AC018445.2-201ENST00000622987 260 ntBASIC1.14□□□□□ -2.23
LINC00643Q86TS7 DLD-214ENST00000639772 421 ntTSL 5 BASIC1.14□□□□□ -2.23
LINC00643Q86TS7 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.14□□□□□ -2.23
LINC00643Q86TS7 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
LINC00643Q86TS7 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.14□□□□□ -2.23
LINC00643Q86TS7 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
LINC00643Q86TS7 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
LINC00643Q86TS7 RNU6-263P-201ENST00000363811 107 ntBASIC1.13□□□□□ -2.23
LINC00643Q86TS7 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
LINC00643Q86TS7 RNU6-19P-201ENST00000384718 107 ntBASIC1.13□□□□□ -2.23
LINC00643Q86TS7 MIR147B-201ENST00000390185 80 ntBASIC1.13□□□□□ -2.23
LINC00643Q86TS7 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.13□□□□□ -2.23
LINC00643Q86TS7 RN7SKP51-201ENST00000410781 304 ntBASIC1.13□□□□□ -2.23
LINC00643Q86TS7 OR9R1P-201ENST00000412200 877 ntBASIC1.13□□□□□ -2.23
LINC00643Q86TS7 AL139128.1-201ENST00000413921 941 ntBASIC1.13□□□□□ -2.23
LINC00643Q86TS7 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.13□□□□□ -2.23
LINC00643Q86TS7 AL353729.1-201ENST00000425044 720 ntBASIC1.13□□□□□ -2.23
LINC00643Q86TS7 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC1.13□□□□□ -2.23
LINC00643Q86TS7 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.13□□□□□ -2.23
LINC00643Q86TS7 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.13□□□□□ -2.23
LINC00643Q86TS7 RPL23AP3-201ENST00000453844 468 ntBASIC1.13□□□□□ -2.23
LINC00643Q86TS7 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC1.13□□□□□ -2.23
LINC00643Q86TS7 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.13□□□□□ -2.23
LINC00643Q86TS7 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC1.13□□□□□ -2.23
LINC00643Q86TS7 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC1.13□□□□□ -2.23
LINC00643Q86TS7 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.13□□□□□ -2.23
LINC00643Q86TS7 HMGB1P47-201ENST00000511281 589 ntBASIC1.13□□□□□ -2.23
LINC00643Q86TS7 AC133963.2-201ENST00000513686 578 ntBASIC1.13□□□□□ -2.23
LINC00643Q86TS7 MTCO1P35-201ENST00000515270 228 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms