Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
KRT28Q7Z3Y7 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
KRT28Q7Z3Y7 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
KRT28Q7Z3Y7 MIR448-201ENST00000362131 111 ntBASIC4.56□□□□□ -1.68
KRT28Q7Z3Y7 RNA5SP502-201ENST00000362694 119 ntBASIC4.56□□□□□ -1.68
KRT28Q7Z3Y7 RNU4-21P-201ENST00000362802 126 ntBASIC4.56□□□□□ -1.68
KRT28Q7Z3Y7 RNU6-289P-201ENST00000364093 107 ntBASIC4.56□□□□□ -1.68
KRT28Q7Z3Y7 RNA5SP126-201ENST00000365092 109 ntBASIC4.56□□□□□ -1.68
KRT28Q7Z3Y7 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
KRT28Q7Z3Y7 AL355379.1-201ENST00000405542 640 ntBASIC4.56□□□□□ -1.68
KRT28Q7Z3Y7 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.56□□□□□ -1.68
KRT28Q7Z3Y7 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.56□□□□□ -1.68
KRT28Q7Z3Y7 RPL23AP69-201ENST00000431134 458 ntBASIC4.56□□□□□ -1.68
KRT28Q7Z3Y7 AL365184.2-201ENST00000431139 435 ntBASIC4.56□□□□□ -1.68
KRT28Q7Z3Y7 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.56□□□□□ -1.68
KRT28Q7Z3Y7 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.56□□□□□ -1.68
KRT28Q7Z3Y7 HSPE1P28-201ENST00000443139 211 ntBASIC4.56□□□□□ -1.68
KRT28Q7Z3Y7 BMI1P1-201ENST00000445879 941 ntBASIC4.56□□□□□ -1.68
KRT28Q7Z3Y7 COX6CP12-201ENST00000446748 202 ntBASIC4.56□□□□□ -1.68
KRT28Q7Z3Y7 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC4.56□□□□□ -1.68
KRT28Q7Z3Y7 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.56□□□□□ -1.68
KRT28Q7Z3Y7 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.56□□□□□ -1.68
KRT28Q7Z3Y7 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.56□□□□□ -1.68
KRT28Q7Z3Y7 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.56□□□□□ -1.68
KRT28Q7Z3Y7 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.56□□□□□ -1.68
KRT28Q7Z3Y7 HIGD1AP1-201ENST00000550979 275 ntBASIC4.56□□□□□ -1.68
KRT28Q7Z3Y7 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.56□□□□□ -1.68
KRT28Q7Z3Y7 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.56□□□□□ -1.68
KRT28Q7Z3Y7 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.56□□□□□ -1.68
KRT28Q7Z3Y7 BBIP1P1-201ENST00000602999 279 ntBASIC4.56□□□□□ -1.68
KRT28Q7Z3Y7 RNVU1-4-201ENST00000612985 164 ntBASIC4.56□□□□□ -1.68
KRT28Q7Z3Y7 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.56□□□□□ -1.68
KRT28Q7Z3Y7 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
KRT28Q7Z3Y7 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
KRT28Q7Z3Y7 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.56□□□□□ -1.68
KRT28Q7Z3Y7 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
KRT28Q7Z3Y7 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.55□□□□□ -1.68
KRT28Q7Z3Y7 AL022578.1-201ENST00000439330 1433 ntBASIC4.55□□□□□ -1.68
KRT28Q7Z3Y7 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
KRT28Q7Z3Y7 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
KRT28Q7Z3Y7 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
KRT28Q7Z3Y7 SNORD82-201ENST00000365530 70 ntBASIC4.55□□□□□ -1.68
KRT28Q7Z3Y7 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
KRT28Q7Z3Y7 RNU6-952P-201ENST00000391164 108 ntBASIC4.55□□□□□ -1.68
KRT28Q7Z3Y7 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
KRT28Q7Z3Y7 HSPE1P8-201ENST00000406997 288 ntBASIC4.55□□□□□ -1.68
KRT28Q7Z3Y7 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.55□□□□□ -1.68
KRT28Q7Z3Y7 AC109780.2-201ENST00000413467 845 ntBASIC4.55□□□□□ -1.68
KRT28Q7Z3Y7 TPMTP2-201ENST00000414372 726 ntBASIC4.55□□□□□ -1.68
KRT28Q7Z3Y7 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC4.55□□□□□ -1.68
KRT28Q7Z3Y7 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC4.55□□□□□ -1.68
KRT28Q7Z3Y7 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC4.55□□□□□ -1.68
KRT28Q7Z3Y7 RPL7P28-201ENST00000437739 740 ntBASIC4.55□□□□□ -1.68
KRT28Q7Z3Y7 LSM1P1-201ENST00000438629 273 ntBASIC4.55□□□□□ -1.68
KRT28Q7Z3Y7 AC092473.1-201ENST00000441098 221 ntBASIC4.55□□□□□ -1.68
KRT28Q7Z3Y7 TRIM60P18-201ENST00000441518 828 ntBASIC4.55□□□□□ -1.68
KRT28Q7Z3Y7 AC140076.1-201ENST00000449897 361 ntBASIC4.55□□□□□ -1.68
KRT28Q7Z3Y7 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC4.55□□□□□ -1.68
KRT28Q7Z3Y7 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.55□□□□□ -1.68
KRT28Q7Z3Y7 RNU6-956P-201ENST00000458868 103 ntBASIC4.55□□□□□ -1.68
KRT28Q7Z3Y7 PABPC1P3-201ENST00000469174 459 ntBASIC4.55□□□□□ -1.68
KRT28Q7Z3Y7 AC087312.1-201ENST00000471411 480 ntBASIC4.55□□□□□ -1.68
KRT28Q7Z3Y7 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.55□□□□□ -1.68
KRT28Q7Z3Y7 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.55□□□□□ -1.68
KRT28Q7Z3Y7 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.55□□□□□ -1.68
KRT28Q7Z3Y7 AC093809.1-201ENST00000509155 340 ntBASIC4.55□□□□□ -1.68
KRT28Q7Z3Y7 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.55□□□□□ -1.68
KRT28Q7Z3Y7 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.55□□□□□ -1.68
KRT28Q7Z3Y7 AP000873.5-201ENST00000533906 236 ntBASIC4.55□□□□□ -1.68
KRT28Q7Z3Y7 AC026333.2-201ENST00000542164 106 ntBASIC4.55□□□□□ -1.68
KRT28Q7Z3Y7 AL161713.1-201ENST00000555538 145 ntBASIC4.55□□□□□ -1.68
KRT28Q7Z3Y7 AC006362.1-201ENST00000567392 174 ntBASIC4.55□□□□□ -1.68
KRT28Q7Z3Y7 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.55□□□□□ -1.68
KRT28Q7Z3Y7 MIR4458-201ENST00000578872 75 ntBASIC4.55□□□□□ -1.68
KRT28Q7Z3Y7 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.55□□□□□ -1.68
KRT28Q7Z3Y7 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.55□□□□□ -1.68
KRT28Q7Z3Y7 RSL24D1P11-201ENST00000591045 491 ntBASIC4.55□□□□□ -1.68
KRT28Q7Z3Y7 AC146944.4-201ENST00000602697 718 ntBASIC4.55□□□□□ -1.68
KRT28Q7Z3Y7 AL139286.1-201ENST00000604465 483 ntBASIC4.55□□□□□ -1.68
KRT28Q7Z3Y7 AC068276.1-201ENST00000605793 379 ntBASIC4.55□□□□□ -1.68
KRT28Q7Z3Y7 AC015813.4-201ENST00000610469 179 ntBASIC4.55□□□□□ -1.68
KRT28Q7Z3Y7 AC122108.2-201ENST00000611946 526 ntBASIC4.55□□□□□ -1.68
KRT28Q7Z3Y7 AC025048.6-202ENST00000627667 438 ntBASIC4.55□□□□□ -1.68
KRT28Q7Z3Y7 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
KRT28Q7Z3Y7 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
KRT28Q7Z3Y7 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
KRT28Q7Z3Y7 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
KRT28Q7Z3Y7 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
KRT28Q7Z3Y7 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC4.54□□□□□ -1.68
KRT28Q7Z3Y7 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
KRT28Q7Z3Y7 RNU1-18P-201ENST00000363062 164 ntBASIC4.54□□□□□ -1.68
KRT28Q7Z3Y7 Y_RNA.553-201ENST00000384670 102 ntBASIC4.54□□□□□ -1.68
KRT28Q7Z3Y7 RNY3P10-201ENST00000384764 102 ntBASIC4.54□□□□□ -1.68
KRT28Q7Z3Y7 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.54□□□□□ -1.68
KRT28Q7Z3Y7 CYCSP46-201ENST00000423569 204 ntBASIC4.54□□□□□ -1.68
KRT28Q7Z3Y7 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.54□□□□□ -1.68
KRT28Q7Z3Y7 MTND5P14-201ENST00000441481 1267 ntBASIC4.54□□□□□ -1.68
KRT28Q7Z3Y7 EPS15P1-201ENST00000448836 336 ntBASIC4.54□□□□□ -1.68
KRT28Q7Z3Y7 USP9YP34-201ENST00000453983 808 ntBASIC4.54□□□□□ -1.68
KRT28Q7Z3Y7 RN7SL863P-201ENST00000462370 296 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 133.7 ms