Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.74□□□□□ -1.65
KRT40Q6A162 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.74□□□□□ -1.65
KRT40Q6A162 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.74□□□□□ -1.65
KRT40Q6A162 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC4.74□□□□□ -1.65
KRT40Q6A162 AC005297.2-201ENST00000450430 606 ntBASIC4.74□□□□□ -1.65
KRT40Q6A162 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.74□□□□□ -1.65
KRT40Q6A162 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.74□□□□□ -1.65
KRT40Q6A162 snoU13.24-201ENST00000458998 104 ntBASIC4.74□□□□□ -1.65
KRT40Q6A162 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.74□□□□□ -1.65
KRT40Q6A162 OR5H5P-201ENST00000503164 928 ntBASIC4.74□□□□□ -1.65
KRT40Q6A162 MTCO2P30-201ENST00000503662 364 ntBASIC4.74□□□□□ -1.65
KRT40Q6A162 AC018710.1-201ENST00000506509 158 ntBASIC4.74□□□□□ -1.65
KRT40Q6A162 AC010493.1-201ENST00000513479 292 ntBASIC4.74□□□□□ -1.65
KRT40Q6A162 RNU6-714P-201ENST00000516963 103 ntBASIC4.74□□□□□ -1.65
KRT40Q6A162 IGKV2-38-201ENST00000517443 247 ntBASIC4.74□□□□□ -1.65
KRT40Q6A162 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.74□□□□□ -1.65
KRT40Q6A162 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.74□□□□□ -1.65
KRT40Q6A162 AP003034.1-201ENST00000534621 422 ntBASIC4.74□□□□□ -1.65
KRT40Q6A162 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
KRT40Q6A162 ANP32BP3-201ENST00000559213 706 ntBASIC4.74□□□□□ -1.65
KRT40Q6A162 AP001330.5-201ENST00000607176 411 ntBASIC4.74□□□□□ -1.65
KRT40Q6A162 RNU4-89P-201ENST00000607443 133 ntBASIC4.74□□□□□ -1.65
KRT40Q6A162 AL121757.2-201ENST00000611223 313 ntBASIC4.74□□□□□ -1.65
KRT40Q6A162 AC009159.1-201ENST00000618386 642 ntBASIC4.74□□□□□ -1.65
KRT40Q6A162 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.74□□□□□ -1.65
KRT40Q6A162 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.74□□□□□ -1.65
KRT40Q6A162 AC010338.1-201ENST00000621823 717 ntBASIC4.74□□□□□ -1.65
KRT40Q6A162 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.74□□□□□ -1.65
KRT40Q6A162 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
KRT40Q6A162 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.74□□□□□ -1.65
KRT40Q6A162 NUP58P1-201ENST00000502546 1738 ntBASIC4.74□□□□□ -1.65
KRT40Q6A162 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.74□□□□□ -1.65
KRT40Q6A162 Z82217.1-201ENST00000625157 8149 ntBASIC4.74□□□□□ -1.65
KRT40Q6A162 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.74□□□□□ -1.65
KRT40Q6A162 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.74□□□□□ -1.65
KRT40Q6A162 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.73□□□□□ -1.65
KRT40Q6A162 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
KRT40Q6A162 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
KRT40Q6A162 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
KRT40Q6A162 OR52B1P-201ENST00000316506 909 ntBASIC4.73□□□□□ -1.65
KRT40Q6A162 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.73□□□□□ -1.65
KRT40Q6A162 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.73□□□□□ -1.65
KRT40Q6A162 RNU5E-1-201ENST00000362477 120 ntBASIC4.73□□□□□ -1.65
KRT40Q6A162 RNA5SP391-201ENST00000363456 119 ntBASIC4.73□□□□□ -1.65
KRT40Q6A162 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
KRT40Q6A162 RNU6-730P-201ENST00000383954 104 ntBASIC4.73□□□□□ -1.65
KRT40Q6A162 RNU6-1009P-201ENST00000390996 107 ntBASIC4.73□□□□□ -1.65
KRT40Q6A162 AL603766.1-201ENST00000407763 664 ntBASIC4.73□□□□□ -1.65
KRT40Q6A162 RNU6ATAC-201ENST00000408749 126 ntBASIC4.73□□□□□ -1.65
KRT40Q6A162 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC4.73□□□□□ -1.65
KRT40Q6A162 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.73□□□□□ -1.65
KRT40Q6A162 AL590609.2-201ENST00000421430 368 ntBASIC4.73□□□□□ -1.65
KRT40Q6A162 AL353777.1-201ENST00000425552 326 ntBASIC4.73□□□□□ -1.65
KRT40Q6A162 AC091390.3-201ENST00000426478 338 ntBASIC4.73□□□□□ -1.65
KRT40Q6A162 NANOGP6-201ENST00000429190 847 ntBASIC4.73□□□□□ -1.65
KRT40Q6A162 AC018644.1-201ENST00000429934 551 ntBASIC4.73□□□□□ -1.65
KRT40Q6A162 AL358472.1-201ENST00000431295 329 ntBASIC4.73□□□□□ -1.65
KRT40Q6A162 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.73□□□□□ -1.65
KRT40Q6A162 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.73□□□□□ -1.65
KRT40Q6A162 AC022364.2-201ENST00000457963 554 ntBASIC4.73□□□□□ -1.65
KRT40Q6A162 AL136126.1-201ENST00000473603 402 ntBASIC4.73□□□□□ -1.65
KRT40Q6A162 RPS27AP13-201ENST00000498403 237 ntBASIC4.73□□□□□ -1.65
KRT40Q6A162 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.73□□□□□ -1.65
KRT40Q6A162 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.73□□□□□ -1.65
KRT40Q6A162 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.73□□□□□ -1.65
KRT40Q6A162 AC025465.4-201ENST00000513422 638 ntBASIC4.73□□□□□ -1.65
KRT40Q6A162 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.73□□□□□ -1.65
KRT40Q6A162 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.73□□□□□ -1.65
KRT40Q6A162 AC022861.1-201ENST00000522981 663 ntBASIC4.73□□□□□ -1.65
KRT40Q6A162 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC4.73□□□□□ -1.65
KRT40Q6A162 AF235103.2-201ENST00000525753 346 ntBASIC4.73□□□□□ -1.65
KRT40Q6A162 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
KRT40Q6A162 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.73□□□□□ -1.65
KRT40Q6A162 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC4.73□□□□□ -1.65
KRT40Q6A162 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC4.73□□□□□ -1.65
KRT40Q6A162 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.73□□□□□ -1.65
KRT40Q6A162 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.73□□□□□ -1.65
KRT40Q6A162 AC008739.3-201ENST00000603262 127 ntBASIC4.73□□□□□ -1.65
KRT40Q6A162 MIR98-201ENST00000606724 119 ntBASIC4.73□□□□□ -1.65
KRT40Q6A162 AC093788.1-201ENST00000609356 927 ntBASIC4.73□□□□□ -1.65
KRT40Q6A162 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
KRT40Q6A162 AC024560.2-201ENST00000507981 1497 ntBASIC4.73□□□□□ -1.65
KRT40Q6A162 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.73□□□□□ -1.65
KRT40Q6A162 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.73□□□□□ -1.65
KRT40Q6A162 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.73□□□□□ -1.65
KRT40Q6A162 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
KRT40Q6A162 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
KRT40Q6A162 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.72□□□□□ -1.65
KRT40Q6A162 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
KRT40Q6A162 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
KRT40Q6A162 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
KRT40Q6A162 RNA5SP124-201ENST00000362739 110 ntBASIC4.72□□□□□ -1.65
KRT40Q6A162 SNORD74.4-201ENST00000364129 80 ntBASIC4.72□□□□□ -1.65
KRT40Q6A162 RNU4-76P-201ENST00000364509 141 ntBASIC4.72□□□□□ -1.65
KRT40Q6A162 Y_RNA.279-201ENST00000364763 95 ntBASIC4.72□□□□□ -1.65
KRT40Q6A162 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
KRT40Q6A162 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
KRT40Q6A162 RNU6-877P-201ENST00000383868 107 ntBASIC4.72□□□□□ -1.65
KRT40Q6A162 Y_RNA.509-201ENST00000384506 99 ntBASIC4.72□□□□□ -1.65
KRT40Q6A162 RPL23AP32-201ENST00000395315 459 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms