Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 RNU6-209P-201ENST00000384118 107 ntBASIC6.13□□□□□ -1.43
RNF20Q5VTR2 Y_RNA.447-201ENST00000384184 113 ntBASIC6.13□□□□□ -1.43
RNF20Q5VTR2 RNU6-306P-201ENST00000384617 107 ntBASIC6.13□□□□□ -1.43
RNF20Q5VTR2 SNORA16.2-201ENST00000390991 127 ntBASIC6.13□□□□□ -1.43
RNF20Q5VTR2 RNU6-823P-201ENST00000391042 103 ntBASIC6.13□□□□□ -1.43
RNF20Q5VTR2 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC6.13□□□□□ -1.43
RNF20Q5VTR2 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC6.13□□□□□ -1.43
RNF20Q5VTR2 RPL7P37-201ENST00000425095 738 ntBASIC6.13□□□□□ -1.43
RNF20Q5VTR2 RPL21P112-201ENST00000434403 463 ntBASIC6.13□□□□□ -1.43
RNF20Q5VTR2 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC6.13□□□□□ -1.43
RNF20Q5VTR2 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC6.13□□□□□ -1.43
RNF20Q5VTR2 AC105402.2-201ENST00000438503 358 ntBASIC6.13□□□□□ -1.43
RNF20Q5VTR2 MTCO3P45-201ENST00000443036 613 ntBASIC6.13□□□□□ -1.43
RNF20Q5VTR2 Z95327.1-201ENST00000446082 482 ntBASIC6.13□□□□□ -1.43
RNF20Q5VTR2 AC005008.1-201ENST00000456151 612 ntBASIC6.13□□□□□ -1.43
RNF20Q5VTR2 SLC25A15P5-201ENST00000508033 253 ntBASIC6.13□□□□□ -1.43
RNF20Q5VTR2 ATP5LP3-201ENST00000514223 304 ntBASIC6.13□□□□□ -1.43
RNF20Q5VTR2 SNORA14.1-201ENST00000516113 141 ntBASIC6.13□□□□□ -1.43
RNF20Q5VTR2 RNY3P15-201ENST00000516297 97 ntBASIC6.13□□□□□ -1.43
RNF20Q5VTR2 RNA5SP384-201ENST00000516615 116 ntBASIC6.13□□□□□ -1.43
RNF20Q5VTR2 RPL23AP84-201ENST00000571193 464 ntBASIC6.13□□□□□ -1.43
RNF20Q5VTR2 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC6.13□□□□□ -1.43
RNF20Q5VTR2 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC6.13□□□□□ -1.43
RNF20Q5VTR2 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC6.13□□□□□ -1.43
RNF20Q5VTR2 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
RNF20Q5VTR2 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RNF20Q5VTR2 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RNF20Q5VTR2 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RNF20Q5VTR2 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
RNF20Q5VTR2 AC074029.4-201ENST00000624796 1859 ntBASIC6.13□□□□□ -1.43
RNF20Q5VTR2 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RNF20Q5VTR2 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
RNF20Q5VTR2 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RNF20Q5VTR2 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RNF20Q5VTR2 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC6.12□□□□□ -1.43
RNF20Q5VTR2 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC6.12□□□□□ -1.43
RNF20Q5VTR2 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC6.12□□□□□ -1.43
RNF20Q5VTR2 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RNF20Q5VTR2 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RNF20Q5VTR2 XIAPP3-201ENST00000312918 795 ntBASIC6.12□□□□□ -1.43
RNF20Q5VTR2 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RNF20Q5VTR2 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
RNF20Q5VTR2 SNORA17.1-201ENST00000362945 126 ntBASIC6.12□□□□□ -1.43
RNF20Q5VTR2 RNU1-115P-201ENST00000365329 160 ntBASIC6.12□□□□□ -1.43
RNF20Q5VTR2 RHOT1P2-201ENST00000366423 333 ntBASIC6.12□□□□□ -1.43
RNF20Q5VTR2 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
RNF20Q5VTR2 AL445189.1-201ENST00000405722 338 ntBASIC6.12□□□□□ -1.43
RNF20Q5VTR2 MIR548I3-201ENST00000408378 149 ntBASIC6.12□□□□□ -1.43
RNF20Q5VTR2 MIR548I1-201ENST00000408810 149 ntBASIC6.12□□□□□ -1.43
RNF20Q5VTR2 RPL21P109-201ENST00000422213 475 ntBASIC6.12□□□□□ -1.43
RNF20Q5VTR2 RPL23AP38-201ENST00000423801 469 ntBASIC6.12□□□□□ -1.43
RNF20Q5VTR2 FAR2P4-202ENST00000425399 584 ntBASIC6.12□□□□□ -1.43
RNF20Q5VTR2 CALM2P2-201ENST00000428512 440 ntBASIC6.12□□□□□ -1.43
RNF20Q5VTR2 RPL23AP50-201ENST00000434149 455 ntBASIC6.12□□□□□ -1.43
RNF20Q5VTR2 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC6.12□□□□□ -1.43
RNF20Q5VTR2 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RNF20Q5VTR2 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC6.12□□□□□ -1.43
RNF20Q5VTR2 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC6.12□□□□□ -1.43
RNF20Q5VTR2 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC6.12□□□□□ -1.43
RNF20Q5VTR2 RN7SL443P-201ENST00000464331 290 ntBASIC6.12□□□□□ -1.43
RNF20Q5VTR2 AC053481.1-201ENST00000467217 306 ntBASIC6.12□□□□□ -1.43
RNF20Q5VTR2 CREM-238ENST00000488741 651 ntTSL 2 BASIC6.12□□□□□ -1.43
RNF20Q5VTR2 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC6.12□□□□□ -1.43
RNF20Q5VTR2 EXOC5P1-201ENST00000510543 1969 ntBASIC6.12□□□□□ -1.43
RNF20Q5VTR2 RNU6-1069P-201ENST00000516612 133 ntBASIC6.12□□□□□ -1.43
RNF20Q5VTR2 RNU6-685P-201ENST00000517088 95 ntBASIC6.12□□□□□ -1.43
RNF20Q5VTR2 RNU6-323P-201ENST00000521915 107 ntBASIC6.12□□□□□ -1.43
RNF20Q5VTR2 SMG1P4-204ENST00000523028 4131 ntBASIC6.12□□□□□ -1.43
RNF20Q5VTR2 AC009570.1-201ENST00000609599 745 ntBASIC6.12□□□□□ -1.43
RNF20Q5VTR2 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC6.12□□□□□ -1.43
RNF20Q5VTR2 AL589994.2-201ENST00000621124 579 ntBASIC6.12□□□□□ -1.43
RNF20Q5VTR2 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RNF20Q5VTR2 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC6.12□□□□□ -1.43
RNF20Q5VTR2 AC004817.4-201ENST00000602396 3625 ntBASIC6.11□□□□□ -1.43
RNF20Q5VTR2 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RNF20Q5VTR2 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC6.11□□□□□ -1.43
RNF20Q5VTR2 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RNF20Q5VTR2 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
RNF20Q5VTR2 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RNF20Q5VTR2 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RNF20Q5VTR2 AL122126.1-201ENST00000546905 1318 ntBASIC6.11□□□□□ -1.43
RNF20Q5VTR2 Y_RNA.2-201ENST00000362330 96 ntBASIC6.11□□□□□ -1.43
RNF20Q5VTR2 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RNF20Q5VTR2 SNORA2.3-201ENST00000383920 135 ntBASIC6.11□□□□□ -1.43
RNF20Q5VTR2 RNU6-128P-201ENST00000383976 107 ntBASIC6.11□□□□□ -1.43
RNF20Q5VTR2 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
RNF20Q5VTR2 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RNF20Q5VTR2 MIR1286-201ENST00000408112 78 ntBASIC6.11□□□□□ -1.43
RNF20Q5VTR2 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC6.11□□□□□ -1.43
RNF20Q5VTR2 RPLP0P7-201ENST00000416050 667 ntBASIC6.11□□□□□ -1.43
RNF20Q5VTR2 AL356968.1-201ENST00000416622 474 ntBASIC6.11□□□□□ -1.43
RNF20Q5VTR2 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC6.11□□□□□ -1.43
RNF20Q5VTR2 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC6.11□□□□□ -1.43
RNF20Q5VTR2 AL139148.1-201ENST00000427122 680 ntBASIC6.11□□□□□ -1.43
RNF20Q5VTR2 AL360081.1-201ENST00000428299 555 ntBASIC6.11□□□□□ -1.43
RNF20Q5VTR2 MRPS18BP2-201ENST00000434310 759 ntBASIC6.11□□□□□ -1.43
RNF20Q5VTR2 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC6.11□□□□□ -1.43
RNF20Q5VTR2 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC6.11□□□□□ -1.43
RNF20Q5VTR2 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC6.11□□□□□ -1.43
RNF20Q5VTR2 FABP5P13-201ENST00000452144 328 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms