Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
VPS13DQ5THJ4 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
VPS13DQ5THJ4 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC1.22□□□□□ -2.21
VPS13DQ5THJ4 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC1.22□□□□□ -2.21
VPS13DQ5THJ4 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC1.22□□□□□ -2.21
VPS13DQ5THJ4 AC005912.1-201ENST00000495392 255 ntBASIC1.22□□□□□ -2.21
VPS13DQ5THJ4 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC1.22□□□□□ -2.21
VPS13DQ5THJ4 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.22□□□□□ -2.21
VPS13DQ5THJ4 AL645939.4-201ENST00000604495 135 ntBASIC1.22□□□□□ -2.21
VPS13DQ5THJ4 RNU6-707P-201ENST00000364647 95 ntBASIC1.21□□□□□ -2.22
VPS13DQ5THJ4 RNA5SP160-201ENST00000364866 120 ntBASIC1.21□□□□□ -2.22
VPS13DQ5THJ4 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC1.21□□□□□ -2.22
VPS13DQ5THJ4 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
VPS13DQ5THJ4 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.21□□□□□ -2.22
VPS13DQ5THJ4 RPL5P13-201ENST00000462840 709 ntBASIC1.21□□□□□ -2.22
VPS13DQ5THJ4 AC090255.1-201ENST00000495779 349 ntBASIC1.21□□□□□ -2.22
VPS13DQ5THJ4 AC005951.1-201ENST00000576706 485 ntBASIC1.21□□□□□ -2.22
VPS13DQ5THJ4 AC098679.5-201ENST00000624394 571 ntBASIC1.21□□□□□ -2.22
VPS13DQ5THJ4 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.21□□□□□ -2.22
VPS13DQ5THJ4 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
VPS13DQ5THJ4 RNU6-582P-201ENST00000362989 107 ntBASIC1.21□□□□□ -2.22
VPS13DQ5THJ4 RNA5SP181-201ENST00000410246 98 ntBASIC1.21□□□□□ -2.22
VPS13DQ5THJ4 VN1R31P-201ENST00000417498 730 ntBASIC1.21□□□□□ -2.22
VPS13DQ5THJ4 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC1.21□□□□□ -2.22
VPS13DQ5THJ4 IFNWP4-201ENST00000453148 294 ntBASIC1.21□□□□□ -2.22
VPS13DQ5THJ4 CDC42P1-201ENST00000456658 548 ntBASIC1.21□□□□□ -2.22
VPS13DQ5THJ4 AC025033.1-201ENST00000463883 194 ntBASIC1.21□□□□□ -2.22
VPS13DQ5THJ4 AC087190.1-201ENST00000484462 480 ntBASIC1.21□□□□□ -2.22
VPS13DQ5THJ4 COX6CP5-201ENST00000527162 228 ntBASIC1.21□□□□□ -2.22
VPS13DQ5THJ4 AL161670.1-201ENST00000554348 137 ntBASIC1.21□□□□□ -2.22
VPS13DQ5THJ4 RNY1P14-201ENST00000384426 108 ntBASIC1.21□□□□□ -2.22
VPS13DQ5THJ4 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC1.21□□□□□ -2.22
VPS13DQ5THJ4 HMGB3P2-201ENST00000411913 584 ntBASIC1.21□□□□□ -2.22
VPS13DQ5THJ4 POLR2J4-204ENST00000418424 324 ntBASIC1.21□□□□□ -2.22
VPS13DQ5THJ4 COX6CP12-201ENST00000446748 202 ntBASIC1.21□□□□□ -2.22
VPS13DQ5THJ4 RPS15AP1-201ENST00000457423 391 ntBASIC1.21□□□□□ -2.22
VPS13DQ5THJ4 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC1.21□□□□□ -2.22
VPS13DQ5THJ4 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC1.21□□□□□ -2.22
VPS13DQ5THJ4 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.21□□□□□ -2.22
VPS13DQ5THJ4 AP000648.3-201ENST00000623539 4507 ntBASIC1.21□□□□□ -2.22
VPS13DQ5THJ4 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.21□□□□□ -2.22
VPS13DQ5THJ4 CNOT6LP1-201ENST00000559681 1462 ntBASIC1.2□□□□□ -2.22
VPS13DQ5THJ4 RPL23AP7-203ENST00000449021 469 ntBASIC1.2□□□□□ -2.22
VPS13DQ5THJ4 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC1.2□□□□□ -2.22
VPS13DQ5THJ4 TBCAP3-201ENST00000512475 312 ntBASIC1.2□□□□□ -2.22
VPS13DQ5THJ4 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.2□□□□□ -2.22
VPS13DQ5THJ4 AC087441.2-201ENST00000529141 262 ntBASIC1.2□□□□□ -2.22
VPS13DQ5THJ4 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.2□□□□□ -2.22
VPS13DQ5THJ4 HMGN2P28-201ENST00000606102 262 ntBASIC1.2□□□□□ -2.22
VPS13DQ5THJ4 C2orf27A-204ENST00000623058 969 ntBASIC1.2□□□□□ -2.22
VPS13DQ5THJ4 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.2□□□□□ -2.22
VPS13DQ5THJ4 API5P2-201ENST00000397055 1498 ntBASIC1.2□□□□□ -2.22
VPS13DQ5THJ4 ZNF876P-202ENST00000398732 1485 ntBASIC1.2□□□□□ -2.22
VPS13DQ5THJ4 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC1.2□□□□□ -2.22
VPS13DQ5THJ4 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC1.2□□□□□ -2.22
VPS13DQ5THJ4 AL110115.1-201ENST00000614396 364 ntBASIC1.2□□□□□ -2.22
VPS13DQ5THJ4 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC1.2□□□□□ -2.22
VPS13DQ5THJ4 EIF1AXP1-201ENST00000419267 435 ntBASIC1.2□□□□□ -2.22
VPS13DQ5THJ4 FO393414.1-201ENST00000428697 1184 ntBASIC1.2□□□□□ -2.22
VPS13DQ5THJ4 ARPC3P1-201ENST00000437218 533 ntBASIC1.2□□□□□ -2.22
VPS13DQ5THJ4 DNAJC19P4-201ENST00000440115 345 ntBASIC1.2□□□□□ -2.22
VPS13DQ5THJ4 PPP1R2P5-201ENST00000457256 603 ntBASIC1.2□□□□□ -2.22
VPS13DQ5THJ4 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC1.2□□□□□ -2.22
VPS13DQ5THJ4 AC007687.1-201ENST00000602704 304 ntBASIC1.2□□□□□ -2.22
VPS13DQ5THJ4 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
VPS13DQ5THJ4 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC1.2□□□□□ -2.22
VPS13DQ5THJ4 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC1.19□□□□□ -2.22
VPS13DQ5THJ4 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.19□□□□□ -2.22
VPS13DQ5THJ4 SNORA31.26-201ENST00000517250 137 ntBASIC1.19□□□□□ -2.22
VPS13DQ5THJ4 Xist_exon1.1-201ENST00000618930 85 ntBASIC1.19□□□□□ -2.22
VPS13DQ5THJ4 AC009452.1-201ENST00000640823 606 ntBASIC1.19□□□□□ -2.22
VPS13DQ5THJ4 MTCO1P6-201ENST00000481192 1384 ntBASIC1.19□□□□□ -2.22
VPS13DQ5THJ4 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
VPS13DQ5THJ4 Y_RNA.354-201ENST00000365448 111 ntBASIC1.19□□□□□ -2.22
VPS13DQ5THJ4 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.19□□□□□ -2.22
VPS13DQ5THJ4 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC1.19□□□□□ -2.22
VPS13DQ5THJ4 XKRY2-201ENST00000442362 1093 ntBASIC1.19□□□□□ -2.22
VPS13DQ5THJ4 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC1.19□□□□□ -2.22
VPS13DQ5THJ4 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC1.19□□□□□ -2.22
VPS13DQ5THJ4 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC1.19□□□□□ -2.22
VPS13DQ5THJ4 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.19□□□□□ -2.22
VPS13DQ5THJ4 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC1.19□□□□□ -2.22
VPS13DQ5THJ4 AC012360.2-201ENST00000609349 391 ntBASIC1.19□□□□□ -2.22
VPS13DQ5THJ4 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.19□□□□□ -2.22
VPS13DQ5THJ4 RNA5SP167-201ENST00000365461 116 ntBASIC1.19□□□□□ -2.22
VPS13DQ5THJ4 RNU6ATAC16P-201ENST00000408591 138 ntBASIC1.19□□□□□ -2.22
VPS13DQ5THJ4 RAD23BP2-201ENST00000416003 1207 ntBASIC1.19□□□□□ -2.22
VPS13DQ5THJ4 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC1.19□□□□□ -2.22
VPS13DQ5THJ4 AC104435.1-201ENST00000483483 166 ntBASIC1.19□□□□□ -2.22
VPS13DQ5THJ4 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC1.19□□□□□ -2.22
VPS13DQ5THJ4 RPS3AP23-202ENST00000574601 686 ntBASIC1.19□□□□□ -2.22
VPS13DQ5THJ4 AL049779.4-201ENST00000604500 156 ntBASIC1.19□□□□□ -2.22
VPS13DQ5THJ4 AC105429.2-201ENST00000610567 517 ntBASIC1.19□□□□□ -2.22
VPS13DQ5THJ4 MTND5P35-201ENST00000557537 1720 ntBASIC1.19□□□□□ -2.22
VPS13DQ5THJ4 SNORD114-26-201ENST00000363543 72 ntBASIC1.19□□□□□ -2.22
VPS13DQ5THJ4 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.19□□□□□ -2.22
VPS13DQ5THJ4 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
VPS13DQ5THJ4 AL513331.1-201ENST00000411908 397 ntBASIC1.19□□□□□ -2.22
VPS13DQ5THJ4 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC1.19□□□□□ -2.22
VPS13DQ5THJ4 RPS15AP36-201ENST00000492022 382 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms