Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
PTCH1Q13635 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.5□□□□□ -1.85
PTCH1Q13635 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
PTCH1Q13635 AC080128.1-201ENST00000474389 1917 ntBASIC3.49□□□□□ -1.85
PTCH1Q13635 SGO1P1-201ENST00000603525 1447 ntBASIC3.49□□□□□ -1.85
PTCH1Q13635 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PTCH1Q13635 RPL9P7-201ENST00000330965 580 ntBASIC3.49□□□□□ -1.85
PTCH1Q13635 Y_RNA.226-201ENST00000364337 114 ntBASIC3.49□□□□□ -1.85
PTCH1Q13635 RNU1-73P-201ENST00000383971 164 ntBASIC3.49□□□□□ -1.85
PTCH1Q13635 AP000567.1-201ENST00000406413 156 ntBASIC3.49□□□□□ -1.85
PTCH1Q13635 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.49□□□□□ -1.85
PTCH1Q13635 MRPL50P4-201ENST00000446432 475 ntBASIC3.49□□□□□ -1.85
PTCH1Q13635 AL034418.1-201ENST00000448675 860 ntBASIC3.49□□□□□ -1.85
PTCH1Q13635 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.49□□□□□ -1.85
PTCH1Q13635 NAP1L1P3-201ENST00000462291 880 ntBASIC3.49□□□□□ -1.85
PTCH1Q13635 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC3.49□□□□□ -1.85
PTCH1Q13635 RPL30P9-201ENST00000465586 330 ntBASIC3.49□□□□□ -1.85
PTCH1Q13635 RN7SKP31-201ENST00000516354 278 ntBASIC3.49□□□□□ -1.85
PTCH1Q13635 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.49□□□□□ -1.85
PTCH1Q13635 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.49□□□□□ -1.85
PTCH1Q13635 AL133271.1-201ENST00000538229 291 ntBASIC3.49□□□□□ -1.85
PTCH1Q13635 AC128657.1-201ENST00000549459 145 ntBASIC3.49□□□□□ -1.85
PTCH1Q13635 LSM6P2-201ENST00000552208 177 ntBASIC3.49□□□□□ -1.85
PTCH1Q13635 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.49□□□□□ -1.85
PTCH1Q13635 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.49□□□□□ -1.85
PTCH1Q13635 AC010735.1-201ENST00000567305 1026 ntBASIC3.49□□□□□ -1.85
PTCH1Q13635 AC006963.1-201ENST00000624003 1052 ntBASIC3.49□□□□□ -1.85
PTCH1Q13635 AC020923.1-201ENST00000624021 917 ntBASIC3.49□□□□□ -1.85
PTCH1Q13635 AC098679.5-201ENST00000624394 571 ntBASIC3.49□□□□□ -1.85
PTCH1Q13635 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
PTCH1Q13635 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
PTCH1Q13635 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
PTCH1Q13635 RNA5SP295-201ENST00000362655 121 ntBASIC3.48□□□□□ -1.85
PTCH1Q13635 RNU6-609P-201ENST00000365459 107 ntBASIC3.48□□□□□ -1.85
PTCH1Q13635 AL512633.1-201ENST00000399931 655 ntBASIC3.48□□□□□ -1.85
PTCH1Q13635 RNA5SP129-201ENST00000410276 118 ntBASIC3.48□□□□□ -1.85
PTCH1Q13635 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.48□□□□□ -1.85
PTCH1Q13635 AC017099.1-201ENST00000448261 1028 ntBASIC3.48□□□□□ -1.85
PTCH1Q13635 CDC42P1-201ENST00000456658 548 ntBASIC3.48□□□□□ -1.85
PTCH1Q13635 HMGN2P16-201ENST00000456802 261 ntBASIC3.48□□□□□ -1.85
PTCH1Q13635 MTCO3P35-201ENST00000485582 781 ntBASIC3.48□□□□□ -1.85
PTCH1Q13635 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.48□□□□□ -1.85
PTCH1Q13635 RN7SKP282-201ENST00000516824 299 ntBASIC3.48□□□□□ -1.85
PTCH1Q13635 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.48□□□□□ -1.85
PTCH1Q13635 NIFKP8-201ENST00000560500 874 ntBASIC3.48□□□□□ -1.85
PTCH1Q13635 AADACP1-206ENST00000561502 1193 ntBASIC3.48□□□□□ -1.85
PTCH1Q13635 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.48□□□□□ -1.85
PTCH1Q13635 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.48□□□□□ -1.85
PTCH1Q13635 AL020997.3-201ENST00000602843 359 ntBASIC3.48□□□□□ -1.85
PTCH1Q13635 MIR8084-201ENST00000614105 89 ntBASIC3.48□□□□□ -1.85
PTCH1Q13635 AL353997.5-201ENST00000618886 171 ntBASIC3.48□□□□□ -1.85
PTCH1Q13635 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
PTCH1Q13635 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PTCH1Q13635 ZNF849P-201ENST00000594711 1566 ntBASIC3.48□□□□□ -1.85
PTCH1Q13635 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PTCH1Q13635 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PTCH1Q13635 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PTCH1Q13635 MIR16-1-201ENST00000385271 89 ntBASIC3.47□□□□□ -1.85
PTCH1Q13635 NDUFB4P5-201ENST00000415445 361 ntBASIC3.47□□□□□ -1.85
PTCH1Q13635 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.47□□□□□ -1.85
PTCH1Q13635 RPS7P2-201ENST00000435134 607 ntBASIC3.47□□□□□ -1.85
PTCH1Q13635 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PTCH1Q13635 AC096638.1-201ENST00000444678 216 ntBASIC3.47□□□□□ -1.85
PTCH1Q13635 HMGN1P5-201ENST00000448591 263 ntBASIC3.47□□□□□ -1.85
PTCH1Q13635 RPL7P52-201ENST00000449200 742 ntBASIC3.47□□□□□ -1.85
PTCH1Q13635 AC008379.1-201ENST00000463655 464 ntBASIC3.47□□□□□ -1.85
PTCH1Q13635 AC010285.1-201ENST00000470580 392 ntBASIC3.47□□□□□ -1.85
PTCH1Q13635 AL024509.2-201ENST00000493462 493 ntBASIC3.47□□□□□ -1.85
PTCH1Q13635 AC121161.1-201ENST00000510606 652 ntBASIC3.47□□□□□ -1.85
PTCH1Q13635 MTCO3P44-201ENST00000510977 541 ntBASIC3.47□□□□□ -1.85
PTCH1Q13635 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.47□□□□□ -1.85
PTCH1Q13635 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.47□□□□□ -1.85
PTCH1Q13635 AP000867.2-201ENST00000532468 320 ntBASIC3.47□□□□□ -1.85
PTCH1Q13635 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.47□□□□□ -1.85
PTCH1Q13635 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.47□□□□□ -1.85
PTCH1Q13635 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.47□□□□□ -1.85
PTCH1Q13635 AC006116.7-201ENST00000590141 756 ntBASIC3.47□□□□□ -1.85
PTCH1Q13635 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.47□□□□□ -1.85
PTCH1Q13635 CRYM-AS1-204ENST00000637983 556 ntBASIC3.47□□□□□ -1.85
PTCH1Q13635 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
PTCH1Q13635 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
PTCH1Q13635 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PTCH1Q13635 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
PTCH1Q13635 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.46□□□□□ -1.85
PTCH1Q13635 RNU6-50P-201ENST00000362356 103 ntBASIC3.46□□□□□ -1.86
PTCH1Q13635 RNU6-339P-201ENST00000384310 107 ntBASIC3.46□□□□□ -1.86
PTCH1Q13635 AL121978.1-201ENST00000402778 359 ntBASIC3.46□□□□□ -1.86
PTCH1Q13635 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PTCH1Q13635 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.46□□□□□ -1.86
PTCH1Q13635 AIMP1P1-201ENST00000418670 937 ntBASIC3.46□□□□□ -1.86
PTCH1Q13635 MTCO1P39-201ENST00000426148 480 ntBASIC3.46□□□□□ -1.86
PTCH1Q13635 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.46□□□□□ -1.86
PTCH1Q13635 RPS24P6-201ENST00000452670 400 ntBASIC3.46□□□□□ -1.86
PTCH1Q13635 HMGB1P15-201ENST00000453854 435 ntBASIC3.46□□□□□ -1.86
PTCH1Q13635 HIGD1AP10-201ENST00000527837 282 ntBASIC3.46□□□□□ -1.86
PTCH1Q13635 AP003168.1-201ENST00000530091 307 ntBASIC3.46□□□□□ -1.86
PTCH1Q13635 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.46□□□□□ -1.86
PTCH1Q13635 RN7SL622P-201ENST00000585292 275 ntBASIC3.46□□□□□ -1.86
PTCH1Q13635 NRBF2P1-201ENST00000587407 859 ntBASIC3.46□□□□□ -1.86
PTCH1Q13635 BNIP3P8-201ENST00000597863 560 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 164.1 ms