Protein–RNA interactions for Protein: Q12770

SCAP, Sterol regulatory element-binding protein cleavage-activating protein, humanhuman

Predictions only

Length 1,279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPQ12770 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SCAPQ12770 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
SCAPQ12770 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SCAPQ12770 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SCAPQ12770 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SCAPQ12770 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SCAPQ12770 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SCAPQ12770 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SCAPQ12770 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
SCAPQ12770 MTCO1P24-201ENST00000515438 1558 ntBASIC4.41□□□□□ -1.7
SCAPQ12770 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.41□□□□□ -1.7
SCAPQ12770 MIR372-201ENST00000362225 67 ntBASIC4.41□□□□□ -1.7
SCAPQ12770 SNORA71.3-201ENST00000362582 128 ntBASIC4.41□□□□□ -1.7
SCAPQ12770 RNU6-356P-201ENST00000384140 107 ntBASIC4.41□□□□□ -1.7
SCAPQ12770 RNU6-878P-201ENST00000384578 110 ntBASIC4.41□□□□□ -1.7
SCAPQ12770 MT-TC-201ENST00000387405 66 ntBASIC4.41□□□□□ -1.7
SCAPQ12770 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SCAPQ12770 AL031679.1-201ENST00000400616 525 ntBASIC4.41□□□□□ -1.7
SCAPQ12770 AC127391.1-201ENST00000411737 98 ntBASIC4.41□□□□□ -1.7
SCAPQ12770 MTND3P17-201ENST00000416968 344 ntBASIC4.41□□□□□ -1.7
SCAPQ12770 AL161631.1-201ENST00000417933 486 ntBASIC4.41□□□□□ -1.7
SCAPQ12770 SNRPEP10-201ENST00000420249 274 ntBASIC4.41□□□□□ -1.7
SCAPQ12770 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.41□□□□□ -1.7
SCAPQ12770 RPL23AP38-201ENST00000423801 469 ntBASIC4.41□□□□□ -1.7
SCAPQ12770 RPL7P2-201ENST00000427639 268 ntBASIC4.41□□□□□ -1.7
SCAPQ12770 RPL23AP33-201ENST00000442301 452 ntBASIC4.41□□□□□ -1.7
SCAPQ12770 HSPE1P28-201ENST00000443139 211 ntBASIC4.41□□□□□ -1.7
SCAPQ12770 AL136380.1-201ENST00000447970 162 ntBASIC4.41□□□□□ -1.7
SCAPQ12770 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.41□□□□□ -1.7
SCAPQ12770 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC4.41□□□□□ -1.7
SCAPQ12770 PMCHL2-203ENST00000457791 237 ntBASIC4.41□□□□□ -1.7
SCAPQ12770 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.41□□□□□ -1.7
SCAPQ12770 AP001025.2-201ENST00000490908 477 ntBASIC4.41□□□□□ -1.7
SCAPQ12770 AC114967.1-201ENST00000504890 259 ntBASIC4.41□□□□□ -1.7
SCAPQ12770 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.41□□□□□ -1.7
SCAPQ12770 AC006499.6-201ENST00000511169 607 ntBASIC4.41□□□□□ -1.7
SCAPQ12770 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.41□□□□□ -1.7
SCAPQ12770 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.41□□□□□ -1.7
SCAPQ12770 RNU6-201P-201ENST00000517100 61 ntBASIC4.41□□□□□ -1.7
SCAPQ12770 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.41□□□□□ -1.7
SCAPQ12770 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.41□□□□□ -1.7
SCAPQ12770 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.41□□□□□ -1.7
SCAPQ12770 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.41□□□□□ -1.7
SCAPQ12770 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.41□□□□□ -1.7
SCAPQ12770 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.41□□□□□ -1.7
SCAPQ12770 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.41□□□□□ -1.7
SCAPQ12770 AC107954.1-201ENST00000565906 727 ntBASIC4.41□□□□□ -1.7
SCAPQ12770 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.41□□□□□ -1.7
SCAPQ12770 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.41□□□□□ -1.7
SCAPQ12770 AL391646.1-201ENST00000603860 190 ntBASIC4.41□□□□□ -1.7
SCAPQ12770 AL133173.2-201ENST00000614270 90 ntBASIC4.41□□□□□ -1.7
SCAPQ12770 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.41□□□□□ -1.7
SCAPQ12770 AC244100.1-202ENST00000621554 382 ntBASIC4.41□□□□□ -1.7
SCAPQ12770 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.41□□□□□ -1.7
SCAPQ12770 AC055839.1-201ENST00000634467 498 ntBASIC4.41□□□□□ -1.7
SCAPQ12770 AC010149.2-201ENST00000637608 315 ntBASIC4.41□□□□□ -1.7
SCAPQ12770 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SCAPQ12770 NMD3P1-201ENST00000439704 1488 ntBASIC4.41□□□□□ -1.7
SCAPQ12770 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SCAPQ12770 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.41□□□□□ -1.7
SCAPQ12770 NUP58P1-201ENST00000502546 1738 ntBASIC4.41□□□□□ -1.7
SCAPQ12770 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SCAPQ12770 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SCAPQ12770 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
SCAPQ12770 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SCAPQ12770 LINC01355-201ENST00000566551 5444 ntBASIC4.4□□□□□ -1.7
SCAPQ12770 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.7
SCAPQ12770 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.4□□□□□ -1.7
SCAPQ12770 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SCAPQ12770 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.4□□□□□ -1.7
SCAPQ12770 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SCAPQ12770 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
SCAPQ12770 RNU6-1322P-201ENST00000364309 107 ntBASIC4.4□□□□□ -1.71
SCAPQ12770 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.4□□□□□ -1.71
SCAPQ12770 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.4□□□□□ -1.71
SCAPQ12770 Y_RNA.535-201ENST00000384612 99 ntBASIC4.4□□□□□ -1.71
SCAPQ12770 RPL7P25-201ENST00000404151 721 ntBASIC4.4□□□□□ -1.71
SCAPQ12770 CYCSP19-201ENST00000411715 316 ntBASIC4.4□□□□□ -1.71
SCAPQ12770 CRYBB2P1-203ENST00000415709 538 ntBASIC4.4□□□□□ -1.71
SCAPQ12770 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.4□□□□□ -1.71
SCAPQ12770 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC4.4□□□□□ -1.71
SCAPQ12770 AC005517.2-201ENST00000424673 553 ntBASIC4.4□□□□□ -1.71
SCAPQ12770 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC4.4□□□□□ -1.71
SCAPQ12770 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.4□□□□□ -1.71
SCAPQ12770 AC104850.1-201ENST00000435940 476 ntBASIC4.4□□□□□ -1.71
SCAPQ12770 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC4.4□□□□□ -1.71
SCAPQ12770 AL590399.6-201ENST00000446396 307 ntBASIC4.4□□□□□ -1.71
SCAPQ12770 AC002381.1-201ENST00000447049 280 ntBASIC4.4□□□□□ -1.71
SCAPQ12770 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC4.4□□□□□ -1.71
SCAPQ12770 RPS20P24-201ENST00000457473 361 ntBASIC4.4□□□□□ -1.71
SCAPQ12770 snoU13.24-201ENST00000458998 104 ntBASIC4.4□□□□□ -1.71
SCAPQ12770 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.4□□□□□ -1.71
SCAPQ12770 TMEM248P1-201ENST00000510579 951 ntBASIC4.4□□□□□ -1.71
SCAPQ12770 PPBPP1-201ENST00000510807 373 ntBASIC4.4□□□□□ -1.71
SCAPQ12770 Vault.3-201ENST00000516676 95 ntBASIC4.4□□□□□ -1.71
SCAPQ12770 RNU6-445P-201ENST00000516949 107 ntBASIC4.4□□□□□ -1.71
SCAPQ12770 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.4□□□□□ -1.71
SCAPQ12770 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.71
SCAPQ12770 HMGB3P26-201ENST00000560051 582 ntBASIC4.4□□□□□ -1.71
SCAPQ12770 AL138976.2-201ENST00000563989 694 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms