Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CBX1P83916 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.01□□□□□ -1.93
CBX1P83916 RN7SKP159-201ENST00000410657 292 ntBASIC3.01□□□□□ -1.93
CBX1P83916 CYCSP19-201ENST00000411715 316 ntBASIC3.01□□□□□ -1.93
CBX1P83916 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC3.01□□□□□ -1.93
CBX1P83916 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.01□□□□□ -1.93
CBX1P83916 AC024082.2-201ENST00000434771 238 ntBASIC3.01□□□□□ -1.93
CBX1P83916 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.01□□□□□ -1.93
CBX1P83916 CDC27P1-201ENST00000445384 715 ntBASIC3.01□□□□□ -1.93
CBX1P83916 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.01□□□□□ -1.93
CBX1P83916 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC3.01□□□□□ -1.93
CBX1P83916 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.01□□□□□ -1.93
CBX1P83916 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CBX1P83916 AC108734.3-201ENST00000481241 1165 ntBASIC3.01□□□□□ -1.93
CBX1P83916 AIG1P1-201ENST00000503376 148 ntBASIC3.01□□□□□ -1.93
CBX1P83916 SNORA31.11-201ENST00000516528 139 ntBASIC3.01□□□□□ -1.93
CBX1P83916 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.01□□□□□ -1.93
CBX1P83916 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.01□□□□□ -1.93
CBX1P83916 OR10V3P-201ENST00000525712 725 ntBASIC3.01□□□□□ -1.93
CBX1P83916 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CBX1P83916 SLC2A13P1-201ENST00000531560 322 ntBASIC3.01□□□□□ -1.93
CBX1P83916 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.01□□□□□ -1.93
CBX1P83916 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.01□□□□□ -1.93
CBX1P83916 HIGD1AP17-201ENST00000554576 276 ntBASIC3.01□□□□□ -1.93
CBX1P83916 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.01□□□□□ -1.93
CBX1P83916 AL355836.1-201ENST00000555951 870 ntBASIC3.01□□□□□ -1.93
CBX1P83916 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.01□□□□□ -1.93
CBX1P83916 AC024060.1-201ENST00000607052 494 ntBASIC3.01□□□□□ -1.93
CBX1P83916 AC092574.1-201ENST00000609771 420 ntBASIC3.01□□□□□ -1.93
CBX1P83916 AC023158.2-201ENST00000614876 543 ntBASIC3.01□□□□□ -1.93
CBX1P83916 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.01□□□□□ -1.93
CBX1P83916 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.01□□□□□ -1.93
CBX1P83916 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.01□□□□□ -1.93
CBX1P83916 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CBX1P83916 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.01□□□□□ -1.93
CBX1P83916 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.01□□□□□ -1.93
CBX1P83916 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CBX1P83916 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CBX1P83916 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3□□□□□ -1.93
CBX1P83916 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3□□□□□ -1.93
CBX1P83916 RNU1-138P-201ENST00000384093 164 ntBASIC3□□□□□ -1.93
CBX1P83916 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3□□□□□ -1.93
CBX1P83916 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3□□□□□ -1.93
CBX1P83916 CYCSP4-201ENST00000429682 331 ntBASIC3□□□□□ -1.93
CBX1P83916 ATP5JP1-201ENST00000431631 322 ntBASIC3□□□□□ -1.93
CBX1P83916 AL035246.1-201ENST00000433554 1255 ntBASIC3□□□□□ -1.93
CBX1P83916 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3□□□□□ -1.93
CBX1P83916 MTND2P20-201ENST00000440805 661 ntBASIC3□□□□□ -1.93
CBX1P83916 RPL21P133-201ENST00000443666 476 ntBASIC3□□□□□ -1.93
CBX1P83916 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3□□□□□ -1.93
CBX1P83916 AC073387.1-201ENST00000453261 709 ntBASIC3□□□□□ -1.93
CBX1P83916 AC104164.3-201ENST00000467363 1258 ntBASIC3□□□□□ -1.93
CBX1P83916 RPL32P34-201ENST00000486380 400 ntBASIC3□□□□□ -1.93
CBX1P83916 C1GALT1P2-201ENST00000510813 1104 ntBASIC3□□□□□ -1.93
CBX1P83916 RN7SKP31-201ENST00000516354 278 ntBASIC3□□□□□ -1.93
CBX1P83916 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3□□□□□ -1.93
CBX1P83916 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3□□□□□ -1.93
CBX1P83916 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3□□□□□ -1.93
CBX1P83916 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3□□□□□ -1.93
CBX1P83916 AC022861.1-201ENST00000522981 663 ntBASIC3□□□□□ -1.93
CBX1P83916 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3□□□□□ -1.93
CBX1P83916 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3□□□□□ -1.93
CBX1P83916 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3□□□□□ -1.93
CBX1P83916 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3□□□□□ -1.93
CBX1P83916 AC106785.1-201ENST00000565935 262 ntBASIC3□□□□□ -1.93
CBX1P83916 RPL23AP78-201ENST00000599928 470 ntBASIC3□□□□□ -1.93
CBX1P83916 DUXAP3-201ENST00000603616 594 ntBASIC3□□□□□ -1.93
CBX1P83916 PRELID3BP8-201ENST00000604148 295 ntBASIC3□□□□□ -1.93
CBX1P83916 AC004853.1-201ENST00000604902 698 ntBASIC3□□□□□ -1.93
CBX1P83916 AC073657.2-201ENST00000605661 303 ntBASIC3□□□□□ -1.93
CBX1P83916 AC024257.5-201ENST00000612739 531 ntBASIC3□□□□□ -1.93
CBX1P83916 AC243773.3-201ENST00000613270 256 ntBASIC3□□□□□ -1.93
CBX1P83916 AL138880.2-201ENST00000616214 239 ntBASIC3□□□□□ -1.93
CBX1P83916 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3□□□□□ -1.93
CBX1P83916 OR1S1-201ENST00000624470 978 ntBASIC3□□□□□ -1.93
CBX1P83916 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3□□□□□ -1.93
CBX1P83916 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3□□□□□ -1.93
CBX1P83916 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
CBX1P83916 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3□□□□□ -1.93
CBX1P83916 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3□□□□□ -1.93
CBX1P83916 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
CBX1P83916 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC3□□□□□ -1.93
CBX1P83916 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CBX1P83916 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CBX1P83916 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CBX1P83916 AC109315.1-201ENST00000584143 1347 ntBASIC2.99□□□□□ -1.93
CBX1P83916 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.99□□□□□ -1.93
CBX1P83916 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CBX1P83916 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CBX1P83916 OR1S2-201ENST00000302592 978 ntBASIC2.99□□□□□ -1.93
CBX1P83916 DEFB108F-201ENST00000344638 222 ntBASIC2.99□□□□□ -1.93
CBX1P83916 RNU4-51P-201ENST00000364206 140 ntBASIC2.99□□□□□ -1.93
CBX1P83916 SNORD21-201ENST00000383953 95 ntBASIC2.99□□□□□ -1.93
CBX1P83916 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
CBX1P83916 Z75741.2-201ENST00000417272 1167 ntBASIC2.99□□□□□ -1.93
CBX1P83916 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC2.99□□□□□ -1.93
CBX1P83916 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC2.99□□□□□ -1.93
CBX1P83916 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.99□□□□□ -1.93
CBX1P83916 GTF2IP3-201ENST00000433887 494 ntBASIC2.99□□□□□ -1.93
CBX1P83916 AC007389.2-201ENST00000434630 306 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms