Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 ATP5F1P1-201ENST00000433775 569 ntBASIC1.9□□□□□ -2.11
CCL20P78556 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC1.9□□□□□ -2.11
CCL20P78556 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC1.9□□□□□ -2.11
CCL20P78556 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.9□□□□□ -2.11
CCL20P78556 RAC1P7-201ENST00000445367 377 ntBASIC1.9□□□□□ -2.11
CCL20P78556 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CCL20P78556 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.9□□□□□ -2.11
CCL20P78556 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC1.9□□□□□ -2.11
CCL20P78556 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC1.9□□□□□ -2.11
CCL20P78556 AC008716.1-201ENST00000511084 513 ntBASIC1.9□□□□□ -2.11
CCL20P78556 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.9□□□□□ -2.11
CCL20P78556 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC1.9□□□□□ -2.11
CCL20P78556 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC1.9□□□□□ -2.11
CCL20P78556 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC1.9□□□□□ -2.11
CCL20P78556 AC079600.2-201ENST00000550076 130 ntBASIC1.9□□□□□ -2.11
CCL20P78556 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CCL20P78556 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC1.9□□□□□ -2.11
CCL20P78556 AC097504.2-201ENST00000608088 454 ntBASIC1.9□□□□□ -2.11
CCL20P78556 AL160394.1-201ENST00000624765 724 ntBASIC1.9□□□□□ -2.11
CCL20P78556 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
CCL20P78556 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
CCL20P78556 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
CCL20P78556 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC1.9□□□□□ -2.11
CCL20P78556 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CCL20P78556 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
CCL20P78556 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
CCL20P78556 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC1.89□□□□□ -2.11
CCL20P78556 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CCL20P78556 SNORD51-201ENST00000384320 80 ntBASIC1.89□□□□□ -2.11
CCL20P78556 MIR767-201ENST00000390228 109 ntBASIC1.89□□□□□ -2.11
CCL20P78556 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CCL20P78556 HMGB3P2-201ENST00000411913 584 ntBASIC1.89□□□□□ -2.11
CCL20P78556 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC1.89□□□□□ -2.11
CCL20P78556 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CCL20P78556 RPS15AP7-201ENST00000439294 405 ntBASIC1.89□□□□□ -2.11
CCL20P78556 PRDX3P3-201ENST00000447765 522 ntBASIC1.89□□□□□ -2.11
CCL20P78556 NDUFA5P7-201ENST00000452914 242 ntBASIC1.89□□□□□ -2.11
CCL20P78556 AL049714.1-201ENST00000466686 347 ntBASIC1.89□□□□□ -2.11
CCL20P78556 AC104164.3-201ENST00000467363 1258 ntBASIC1.89□□□□□ -2.11
CCL20P78556 AC147055.4-201ENST00000504399 745 ntBASIC1.89□□□□□ -2.11
CCL20P78556 AC026427.2-201ENST00000506228 536 ntBASIC1.89□□□□□ -2.11
CCL20P78556 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC1.89□□□□□ -2.11
CCL20P78556 AC023632.4-201ENST00000517783 191 ntBASIC1.89□□□□□ -2.11
CCL20P78556 AC124293.1-201ENST00000530034 493 ntBASIC1.89□□□□□ -2.11
CCL20P78556 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.89□□□□□ -2.11
CCL20P78556 ERP27-202ENST00000540097 993 ntTSL 2 BASIC1.89□□□□□ -2.11
CCL20P78556 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1.89□□□□□ -2.11
CCL20P78556 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.89□□□□□ -2.11
CCL20P78556 AC121758.2-201ENST00000553271 193 ntBASIC1.89□□□□□ -2.11
CCL20P78556 CFL2-206ENST00000556161 546 ntTSL 4 BASIC1.89□□□□□ -2.11
CCL20P78556 AC067805.1-201ENST00000559344 470 ntBASIC1.89□□□□□ -2.11
CCL20P78556 RMST_10.1-201ENST00000616309 154 ntBASIC1.89□□□□□ -2.11
CCL20P78556 ATP5A1P2-202ENST00000616464 443 ntBASIC1.89□□□□□ -2.11
CCL20P78556 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC1.89□□□□□ -2.11
CCL20P78556 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CCL20P78556 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC1.89□□□□□ -2.11
CCL20P78556 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CCL20P78556 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.89□□□□□ -2.11
CCL20P78556 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CCL20P78556 SNORD114-30-201ENST00000364448 72 ntBASIC1.88□□□□□ -2.11
CCL20P78556 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CCL20P78556 EEF1A1P41-201ENST00000414667 207 ntBASIC1.88□□□□□ -2.11
CCL20P78556 AC069157.1-201ENST00000421749 137 ntBASIC1.88□□□□□ -2.11
CCL20P78556 AL365496.1-201ENST00000426885 215 ntBASIC1.88□□□□□ -2.11
CCL20P78556 RPL31P54-201ENST00000429803 370 ntBASIC1.88□□□□□ -2.11
CCL20P78556 ARL4AP4-201ENST00000434170 518 ntBASIC1.88□□□□□ -2.11
CCL20P78556 Z82190.1-201ENST00000454534 490 ntBASIC1.88□□□□□ -2.11
CCL20P78556 RPL31P41-201ENST00000477967 372 ntBASIC1.88□□□□□ -2.11
CCL20P78556 AC079804.2-201ENST00000490376 200 ntBASIC1.88□□□□□ -2.11
CCL20P78556 CEACAMP10-202ENST00000495431 496 ntBASIC1.88□□□□□ -2.11
CCL20P78556 WBP1LP4-201ENST00000505043 344 ntBASIC1.88□□□□□ -2.11
CCL20P78556 HIGD1AP13-201ENST00000509878 289 ntBASIC1.88□□□□□ -2.11
CCL20P78556 AC025768.1-201ENST00000510057 267 ntBASIC1.88□□□□□ -2.11
CCL20P78556 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC1.88□□□□□ -2.11
CCL20P78556 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.88□□□□□ -2.11
CCL20P78556 RNU6-798P-201ENST00000516912 103 ntBASIC1.88□□□□□ -2.11
CCL20P78556 RNU4ATAC17P-201ENST00000517272 120 ntBASIC1.88□□□□□ -2.11
CCL20P78556 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC1.88□□□□□ -2.11
CCL20P78556 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC1.88□□□□□ -2.11
CCL20P78556 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
CCL20P78556 AC007115.1-201ENST00000546853 234 ntBASIC1.88□□□□□ -2.11
CCL20P78556 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.88□□□□□ -2.11
CCL20P78556 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC1.88□□□□□ -2.11
CCL20P78556 HMGB1P14-201ENST00000557424 591 ntBASIC1.88□□□□□ -2.11
CCL20P78556 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC1.88□□□□□ -2.11
CCL20P78556 ANKRD36BP2-206ENST00000575193 1245 ntBASIC1.88□□□□□ -2.11
CCL20P78556 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC1.88□□□□□ -2.11
CCL20P78556 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC1.88□□□□□ -2.11
CCL20P78556 AC093227.2-201ENST00000589357 285 ntBASIC1.88□□□□□ -2.11
CCL20P78556 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.88□□□□□ -2.11
CCL20P78556 AC013444.2-201ENST00000603317 787 ntBASIC1.88□□□□□ -2.11
CCL20P78556 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC1.88□□□□□ -2.11
CCL20P78556 AC079791.1-201ENST00000605356 973 ntBASIC1.88□□□□□ -2.11
CCL20P78556 AC067747.1-201ENST00000608026 250 ntBASIC1.88□□□□□ -2.11
CCL20P78556 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC1.88□□□□□ -2.11
CCL20P78556 MIR7975-201ENST00000619350 68 ntBASIC1.88□□□□□ -2.11
CCL20P78556 AL162233.1-201ENST00000620014 944 ntBASIC1.88□□□□□ -2.11
CCL20P78556 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC1.88□□□□□ -2.11
CCL20P78556 U4.3-201ENST00000621047 82 ntBASIC1.88□□□□□ -2.11
CCL20P78556 U6.105-201ENST00000637379 88 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms