Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC2.35□□□□□ -2.03
ACTBP60709 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC2.35□□□□□ -2.03
ACTBP60709 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.35□□□□□ -2.03
ACTBP60709 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.35□□□□□ -2.03
ACTBP60709 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.35□□□□□ -2.03
ACTBP60709 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
ACTBP60709 PABPC1P9-201ENST00000426076 1612 ntBASIC2.35□□□□□ -2.03
ACTBP60709 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.34□□□□□ -2.03
ACTBP60709 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.34□□□□□ -2.03
ACTBP60709 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
ACTBP60709 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.34□□□□□ -2.03
ACTBP60709 SNORA25.6-201ENST00000364121 118 ntBASIC2.34□□□□□ -2.03
ACTBP60709 RNU1-100P-201ENST00000365255 165 ntBASIC2.34□□□□□ -2.03
ACTBP60709 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.34□□□□□ -2.03
ACTBP60709 AC096664.2-201ENST00000411843 406 ntBASIC2.34□□□□□ -2.03
ACTBP60709 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.34□□□□□ -2.03
ACTBP60709 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.34□□□□□ -2.03
ACTBP60709 AC127537.2-201ENST00000439258 465 ntBASIC2.34□□□□□ -2.03
ACTBP60709 RPS15AP7-201ENST00000439294 405 ntBASIC2.34□□□□□ -2.03
ACTBP60709 NDUFAF4P2-201ENST00000445374 520 ntBASIC2.34□□□□□ -2.03
ACTBP60709 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.34□□□□□ -2.03
ACTBP60709 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.34□□□□□ -2.03
ACTBP60709 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC2.34□□□□□ -2.03
ACTBP60709 snoU109.4-201ENST00000458953 143 ntBASIC2.34□□□□□ -2.03
ACTBP60709 RPS27P26-201ENST00000494583 239 ntBASIC2.34□□□□□ -2.03
ACTBP60709 AC135721.1-201ENST00000497954 479 ntBASIC2.34□□□□□ -2.03
ACTBP60709 AC114322.1-201ENST00000506771 926 ntBASIC2.34□□□□□ -2.03
ACTBP60709 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.34□□□□□ -2.03
ACTBP60709 SCGB1D5P-201ENST00000515134 247 ntBASIC2.34□□□□□ -2.03
ACTBP60709 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.34□□□□□ -2.03
ACTBP60709 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.34□□□□□ -2.03
ACTBP60709 OR4R1P-201ENST00000529879 463 ntBASIC2.34□□□□□ -2.03
ACTBP60709 AC095057.3-201ENST00000567102 1157 ntBASIC2.34□□□□□ -2.03
ACTBP60709 MIR3616-201ENST00000584070 92 ntBASIC2.34□□□□□ -2.03
ACTBP60709 DUXAP3-201ENST00000603616 594 ntBASIC2.34□□□□□ -2.03
ACTBP60709 BNIP3P19-201ENST00000605397 577 ntBASIC2.34□□□□□ -2.03
ACTBP60709 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.34□□□□□ -2.03
ACTBP60709 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.34□□□□□ -2.03
ACTBP60709 MFSD8-213ENST00000641134 1327 ntBASIC2.34□□□□□ -2.04
ACTBP60709 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.34□□□□□ -2.04
ACTBP60709 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.34□□□□□ -2.04
ACTBP60709 AC111188.2-201ENST00000529697 1387 ntBASIC2.34□□□□□ -2.04
ACTBP60709 SDAD1P2-201ENST00000441308 2028 ntBASIC2.34□□□□□ -2.04
ACTBP60709 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.34□□□□□ -2.04
ACTBP60709 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC2.33□□□□□ -2.04
ACTBP60709 Z75741.2-201ENST00000417272 1167 ntBASIC2.33□□□□□ -2.04
ACTBP60709 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.33□□□□□ -2.04
ACTBP60709 AL358075.3-201ENST00000426289 226 ntBASIC2.33□□□□□ -2.04
ACTBP60709 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.33□□□□□ -2.04
ACTBP60709 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC2.33□□□□□ -2.04
ACTBP60709 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.33□□□□□ -2.04
ACTBP60709 MTND3P4-201ENST00000453537 303 ntBASIC2.33□□□□□ -2.04
ACTBP60709 AC087588.1-201ENST00000462203 316 ntBASIC2.33□□□□□ -2.04
ACTBP60709 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.33□□□□□ -2.04
ACTBP60709 RPL31P41-201ENST00000477967 372 ntBASIC2.33□□□□□ -2.04
ACTBP60709 AC126182.1-201ENST00000478134 357 ntBASIC2.33□□□□□ -2.04
ACTBP60709 AL135752.1-201ENST00000479477 471 ntBASIC2.33□□□□□ -2.04
ACTBP60709 AC083906.5-201ENST00000503722 328 ntBASIC2.33□□□□□ -2.04
ACTBP60709 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.33□□□□□ -2.04
ACTBP60709 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.33□□□□□ -2.04
ACTBP60709 RNU6-416P-201ENST00000516265 103 ntBASIC2.33□□□□□ -2.04
ACTBP60709 RNU6-751P-201ENST00000516382 101 ntBASIC2.33□□□□□ -2.04
ACTBP60709 SNORA70.16-201ENST00000516390 95 ntBASIC2.33□□□□□ -2.04
ACTBP60709 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC2.33□□□□□ -2.04
ACTBP60709 HMGB1P41-201ENST00000520234 440 ntBASIC2.33□□□□□ -2.04
ACTBP60709 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.33□□□□□ -2.04
ACTBP60709 SUB1P1-201ENST00000524415 382 ntBASIC2.33□□□□□ -2.04
ACTBP60709 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC2.33□□□□□ -2.04
ACTBP60709 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.33□□□□□ -2.04
ACTBP60709 ACTR3BP3-201ENST00000565577 979 ntBASIC2.33□□□□□ -2.04
ACTBP60709 MIR4325-201ENST00000583049 90 ntBASIC2.33□□□□□ -2.04
ACTBP60709 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.33□□□□□ -2.04
ACTBP60709 AL356280.1-201ENST00000603614 379 ntBASIC2.33□□□□□ -2.04
ACTBP60709 AL160237.3-201ENST00000604114 1013 ntBASIC2.33□□□□□ -2.04
ACTBP60709 AC002487.1-201ENST00000604565 994 ntBASIC2.33□□□□□ -2.04
ACTBP60709 AC010738.1-201ENST00000604970 987 ntBASIC2.33□□□□□ -2.04
ACTBP60709 AC005000.2-201ENST00000605468 310 ntBASIC2.33□□□□□ -2.04
ACTBP60709 AC012443.1-201ENST00000605605 231 ntBASIC2.33□□□□□ -2.04
ACTBP60709 ATP5A1P2-202ENST00000616464 443 ntBASIC2.33□□□□□ -2.04
ACTBP60709 UCA1.1-201ENST00000620952 75 ntBASIC2.33□□□□□ -2.04
ACTBP60709 AL353748.2-201ENST00000622148 471 ntBASIC2.33□□□□□ -2.04
ACTBP60709 AP006248.3-201ENST00000623580 594 ntBASIC2.33□□□□□ -2.04
ACTBP60709 AC098679.5-201ENST00000624394 571 ntBASIC2.33□□□□□ -2.04
ACTBP60709 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
ACTBP60709 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.33□□□□□ -2.04
ACTBP60709 AC008568.2-201ENST00000623862 2313 ntBASIC2.33□□□□□ -2.04
ACTBP60709 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
ACTBP60709 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
ACTBP60709 CR848007.1-201ENST00000442354 1699 ntBASIC2.32□□□□□ -2.04
ACTBP60709 RNU1-140P-201ENST00000365040 165 ntBASIC2.32□□□□□ -2.04
ACTBP60709 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
ACTBP60709 RNU6-883P-201ENST00000384597 107 ntBASIC2.32□□□□□ -2.04
ACTBP60709 MIR767-201ENST00000390228 109 ntBASIC2.32□□□□□ -2.04
ACTBP60709 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.32□□□□□ -2.04
ACTBP60709 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.32□□□□□ -2.04
ACTBP60709 RPL35AP12-201ENST00000425362 338 ntBASIC2.32□□□□□ -2.04
ACTBP60709 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC2.32□□□□□ -2.04
ACTBP60709 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.32□□□□□ -2.04
ACTBP60709 RPS20P5-201ENST00000434808 360 ntBASIC2.32□□□□□ -2.04
ACTBP60709 RPS12P2-201ENST00000439728 269 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 145.7 ms