Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
RHBDL3P58872 AP001486.2-201ENST00000561652 5113 ntBASIC4.43□□□□□ -1.7
RHBDL3P58872 RPL7P26-201ENST00000333817 754 ntBASIC4.43□□□□□ -1.7
RHBDL3P58872 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RHBDL3P58872 Y_RNA.548-201ENST00000384656 105 ntBASIC4.43□□□□□ -1.7
RHBDL3P58872 AF228730.1-201ENST00000397972 663 ntBASIC4.43□□□□□ -1.7
RHBDL3P58872 SNORA11.1-201ENST00000408133 129 ntBASIC4.43□□□□□ -1.7
RHBDL3P58872 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.43□□□□□ -1.7
RHBDL3P58872 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.43□□□□□ -1.7
RHBDL3P58872 RPL7L1P10-201ENST00000427790 463 ntBASIC4.43□□□□□ -1.7
RHBDL3P58872 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
RHBDL3P58872 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC4.43□□□□□ -1.7
RHBDL3P58872 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC4.43□□□□□ -1.7
RHBDL3P58872 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.43□□□□□ -1.7
RHBDL3P58872 RNU7-125P-201ENST00000458760 62 ntBASIC4.43□□□□□ -1.7
RHBDL3P58872 AL049714.1-201ENST00000466686 347 ntBASIC4.43□□□□□ -1.7
RHBDL3P58872 AC068587.2-201ENST00000478386 781 ntBASIC4.43□□□□□ -1.7
RHBDL3P58872 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.43□□□□□ -1.7
RHBDL3P58872 SNORA70.16-201ENST00000516390 95 ntBASIC4.43□□□□□ -1.7
RHBDL3P58872 RNU6-798P-201ENST00000516912 103 ntBASIC4.43□□□□□ -1.7
RHBDL3P58872 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.43□□□□□ -1.7
RHBDL3P58872 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.43□□□□□ -1.7
RHBDL3P58872 OR5B10P-201ENST00000532869 642 ntBASIC4.43□□□□□ -1.7
RHBDL3P58872 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.43□□□□□ -1.7
RHBDL3P58872 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.43□□□□□ -1.7
RHBDL3P58872 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.43□□□□□ -1.7
RHBDL3P58872 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.43□□□□□ -1.7
RHBDL3P58872 COX6CP3-201ENST00000580869 223 ntBASIC4.43□□□□□ -1.7
RHBDL3P58872 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
RHBDL3P58872 MIR4307-201ENST00000582802 84 ntBASIC4.43□□□□□ -1.7
RHBDL3P58872 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.43□□□□□ -1.7
RHBDL3P58872 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.43□□□□□ -1.7
RHBDL3P58872 AL139395.1-201ENST00000603662 160 ntBASIC4.43□□□□□ -1.7
RHBDL3P58872 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.43□□□□□ -1.7
RHBDL3P58872 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC4.43□□□□□ -1.7
RHBDL3P58872 AC019226.1-201ENST00000625666 515 ntBASIC4.43□□□□□ -1.7
RHBDL3P58872 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RHBDL3P58872 AC007823.1-201ENST00000569932 1566 ntBASIC4.43□□□□□ -1.7
RHBDL3P58872 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RHBDL3P58872 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.43□□□□□ -1.7
RHBDL3P58872 CUL1P1-201ENST00000509510 2425 ntBASIC4.43□□□□□ -1.7
RHBDL3P58872 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.43□□□□□ -1.7
RHBDL3P58872 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.43□□□□□ -1.7
RHBDL3P58872 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
RHBDL3P58872 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.43□□□□□ -1.7
RHBDL3P58872 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RHBDL3P58872 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
RHBDL3P58872 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RHBDL3P58872 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.42□□□□□ -1.7
RHBDL3P58872 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RHBDL3P58872 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
RHBDL3P58872 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RHBDL3P58872 SNORD9-201ENST00000362566 104 ntBASIC4.42□□□□□ -1.7
RHBDL3P58872 Y_RNA.333-201ENST00000365274 102 ntBASIC4.42□□□□□ -1.7
RHBDL3P58872 MIR591-201ENST00000385290 95 ntBASIC4.42□□□□□ -1.7
RHBDL3P58872 RNA5SP424-201ENST00000390988 115 ntBASIC4.42□□□□□ -1.7
RHBDL3P58872 CASP3-203ENST00000393588 677 ntTSL 4 BASIC4.42□□□□□ -1.7
RHBDL3P58872 RNA5SP306-201ENST00000411087 107 ntBASIC4.42□□□□□ -1.7
RHBDL3P58872 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.42□□□□□ -1.7
RHBDL3P58872 Z99497.1-201ENST00000421282 135 ntBASIC4.42□□□□□ -1.7
RHBDL3P58872 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC4.42□□□□□ -1.7
RHBDL3P58872 CYCSP4-201ENST00000429682 331 ntBASIC4.42□□□□□ -1.7
RHBDL3P58872 AC109583.1-201ENST00000432156 268 ntBASIC4.42□□□□□ -1.7
RHBDL3P58872 AL159987.2-201ENST00000432754 307 ntBASIC4.42□□□□□ -1.7
RHBDL3P58872 SKP1P1-201ENST00000438081 489 ntBASIC4.42□□□□□ -1.7
RHBDL3P58872 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.42□□□□□ -1.7
RHBDL3P58872 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.42□□□□□ -1.7
RHBDL3P58872 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC4.42□□□□□ -1.7
RHBDL3P58872 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.42□□□□□ -1.7
RHBDL3P58872 HSPE1P6-201ENST00000479457 291 ntBASIC4.42□□□□□ -1.7
RHBDL3P58872 RPS3AP50-201ENST00000487064 803 ntBASIC4.42□□□□□ -1.7
RHBDL3P58872 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC4.42□□□□□ -1.7
RHBDL3P58872 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.42□□□□□ -1.7
RHBDL3P58872 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RHBDL3P58872 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.42□□□□□ -1.7
RHBDL3P58872 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC4.42□□□□□ -1.7
RHBDL3P58872 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC4.42□□□□□ -1.7
RHBDL3P58872 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC4.42□□□□□ -1.7
RHBDL3P58872 AC012435.1-202ENST00000568772 240 ntBASIC4.42□□□□□ -1.7
RHBDL3P58872 AC006116.10-201ENST00000591836 581 ntBASIC4.42□□□□□ -1.7
RHBDL3P58872 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.42□□□□□ -1.7
RHBDL3P58872 AC068790.3-201ENST00000602988 553 ntBASIC4.42□□□□□ -1.7
RHBDL3P58872 AC007179.3-201ENST00000604976 235 ntBASIC4.42□□□□□ -1.7
RHBDL3P58872 U3.45-201ENST00000607547 219 ntBASIC4.42□□□□□ -1.7
RHBDL3P58872 AC093838.1-201ENST00000613014 469 ntBASIC4.42□□□□□ -1.7
RHBDL3P58872 AC002076.2-201ENST00000617362 122 ntBASIC4.42□□□□□ -1.7
RHBDL3P58872 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
RHBDL3P58872 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC4.42□□□□□ -1.7
RHBDL3P58872 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RHBDL3P58872 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.42□□□□□ -1.7
RHBDL3P58872 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
RHBDL3P58872 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
RHBDL3P58872 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.42□□□□□ -1.7
RHBDL3P58872 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RHBDL3P58872 CCT4P2-201ENST00000233836 1548 ntBASIC4.41□□□□□ -1.7
RHBDL3P58872 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
RHBDL3P58872 AC012321.1-201ENST00000561622 1588 ntBASIC4.41□□□□□ -1.7
RHBDL3P58872 AL049781.1-201ENST00000623195 3585 ntBASIC4.41□□□□□ -1.7
RHBDL3P58872 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RHBDL3P58872 RNU5E-8P-201ENST00000363502 116 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms