Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC020893.1-201ENST00000502452 580 ntBASIC3.67□□□□□ -1.82
CDH12P55289 AC010587.1-201ENST00000505809 469 ntBASIC3.67□□□□□ -1.82
CDH12P55289 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.67□□□□□ -1.82
CDH12P55289 PTGES3P3-201ENST00000511479 482 ntBASIC3.67□□□□□ -1.82
CDH12P55289 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.67□□□□□ -1.82
CDH12P55289 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.67□□□□□ -1.82
CDH12P55289 RNU4-60P-201ENST00000517239 135 ntBASIC3.67□□□□□ -1.82
CDH12P55289 CDH12P4-201ENST00000517835 295 ntBASIC3.67□□□□□ -1.82
CDH12P55289 CDH12P3-201ENST00000517935 295 ntBASIC3.67□□□□□ -1.82
CDH12P55289 CDH12P1-201ENST00000518435 295 ntBASIC3.67□□□□□ -1.82
CDH12P55289 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.67□□□□□ -1.82
CDH12P55289 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.67□□□□□ -1.82
CDH12P55289 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.67□□□□□ -1.82
CDH12P55289 CCNG2P1-201ENST00000549521 1000 ntBASIC3.67□□□□□ -1.82
CDH12P55289 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
CDH12P55289 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.67□□□□□ -1.82
CDH12P55289 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.67□□□□□ -1.82
CDH12P55289 MIR3138-201ENST00000585238 82 ntBASIC3.67□□□□□ -1.82
CDH12P55289 AC119501.1-201ENST00000603646 475 ntBASIC3.67□□□□□ -1.82
CDH12P55289 AC115621.1-201ENST00000604653 858 ntBASIC3.67□□□□□ -1.82
CDH12P55289 RBM11P1-201ENST00000604951 799 ntBASIC3.67□□□□□ -1.82
CDH12P55289 AC011816.2-201ENST00000607089 556 ntBASIC3.67□□□□□ -1.82
CDH12P55289 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.67□□□□□ -1.82
CDH12P55289 U4.5-201ENST00000617137 123 ntBASIC3.67□□□□□ -1.82
CDH12P55289 AC006065.5-201ENST00000623427 349 ntBASIC3.67□□□□□ -1.82
CDH12P55289 AC112204.3-201ENST00000623822 332 ntBASIC3.67□□□□□ -1.82
CDH12P55289 CR381653.2-201ENST00000624041 768 ntBASIC3.67□□□□□ -1.82
CDH12P55289 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.67□□□□□ -1.82
CDH12P55289 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CDH12P55289 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.67□□□□□ -1.82
CDH12P55289 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.67□□□□□ -1.82
CDH12P55289 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CDH12P55289 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.67□□□□□ -1.82
CDH12P55289 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.66□□□□□ -1.82
CDH12P55289 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.66□□□□□ -1.82
CDH12P55289 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CDH12P55289 RNU1-18P-201ENST00000363062 164 ntBASIC3.66□□□□□ -1.82
CDH12P55289 RNY4P16-201ENST00000364768 94 ntBASIC3.66□□□□□ -1.82
CDH12P55289 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CDH12P55289 AL049693.1-201ENST00000402760 611 ntBASIC3.66□□□□□ -1.82
CDH12P55289 MRPL42P2-201ENST00000403169 426 ntBASIC3.66□□□□□ -1.82
CDH12P55289 AC127391.1-201ENST00000411737 98 ntBASIC3.66□□□□□ -1.82
CDH12P55289 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.66□□□□□ -1.82
CDH12P55289 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.66□□□□□ -1.82
CDH12P55289 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.66□□□□□ -1.82
CDH12P55289 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CDH12P55289 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.66□□□□□ -1.82
CDH12P55289 AC003071.1-201ENST00000451219 789 ntBASIC3.66□□□□□ -1.82
CDH12P55289 C1DP4-201ENST00000455429 424 ntBASIC3.66□□□□□ -1.82
CDH12P55289 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.66□□□□□ -1.82
CDH12P55289 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.66□□□□□ -1.82
CDH12P55289 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
CDH12P55289 RPS3AP14-201ENST00000483907 780 ntBASIC3.66□□□□□ -1.82
CDH12P55289 RPL23AP41-201ENST00000484754 458 ntBASIC3.66□□□□□ -1.82
CDH12P55289 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.66□□□□□ -1.82
CDH12P55289 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CDH12P55289 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.66□□□□□ -1.82
CDH12P55289 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.66□□□□□ -1.82
CDH12P55289 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.66□□□□□ -1.82
CDH12P55289 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC3.66□□□□□ -1.82
CDH12P55289 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.66□□□□□ -1.82
CDH12P55289 ZNF519P2-201ENST00000557032 169 ntBASIC3.66□□□□□ -1.82
CDH12P55289 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.66□□□□□ -1.82
CDH12P55289 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.66□□□□□ -1.82
CDH12P55289 MIR3146-201ENST00000580367 79 ntBASIC3.66□□□□□ -1.82
CDH12P55289 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.66□□□□□ -1.82
CDH12P55289 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.66□□□□□ -1.82
CDH12P55289 AC007448.1-201ENST00000582714 234 ntBASIC3.66□□□□□ -1.82
CDH12P55289 MIR4443-201ENST00000585052 53 ntBASIC3.66□□□□□ -1.82
CDH12P55289 AC068790.3-201ENST00000602988 553 ntBASIC3.66□□□□□ -1.82
CDH12P55289 AC012669.1-201ENST00000603209 283 ntBASIC3.66□□□□□ -1.82
CDH12P55289 AC245014.2-201ENST00000603689 287 ntBASIC3.66□□□□□ -1.82
CDH12P55289 AC246785.4-201ENST00000605374 287 ntBASIC3.66□□□□□ -1.82
CDH12P55289 ARF4P1-201ENST00000605447 541 ntBASIC3.66□□□□□ -1.82
CDH12P55289 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.66□□□□□ -1.82
CDH12P55289 AL592295.2-201ENST00000612578 206 ntBASIC3.66□□□□□ -1.82
CDH12P55289 AL133173.2-201ENST00000614270 90 ntBASIC3.66□□□□□ -1.82
CDH12P55289 AC090517.2-201ENST00000614966 680 ntBASIC3.66□□□□□ -1.82
CDH12P55289 MLECP1-201ENST00000615893 709 ntBASIC3.66□□□□□ -1.82
CDH12P55289 AL159972.1-201ENST00000625150 448 ntBASIC3.66□□□□□ -1.82
CDH12P55289 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.66□□□□□ -1.82
CDH12P55289 MIR6863-201ENST00000636112 90 ntBASIC3.66□□□□□ -1.82
CDH12P55289 LRRC77P-213ENST00000637727 880 ntBASIC3.66□□□□□ -1.82
CDH12P55289 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.66□□□□□ -1.82
CDH12P55289 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.66□□□□□ -1.82
CDH12P55289 AC026951.1-201ENST00000559530 2459 ntBASIC3.66□□□□□ -1.82
CDH12P55289 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CDH12P55289 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.66□□□□□ -1.82
CDH12P55289 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CDH12P55289 FAM91A3P-201ENST00000456826 2544 ntBASIC3.66□□□□□ -1.82
CDH12P55289 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CDH12P55289 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CDH12P55289 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CDH12P55289 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CDH12P55289 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CDH12P55289 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CDH12P55289 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.65□□□□□ -1.82
CDH12P55289 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
CDH12P55289 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CDH12P55289 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms