Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 MIR26A1-201ENST00000362205 77 ntBASIC2.89□□□□□ -1.95
CDH6P55285 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
CDH6P55285 SNORA18.3-201ENST00000384122 132 ntBASIC2.89□□□□□ -1.95
CDH6P55285 MIR128-1-201ENST00000384921 82 ntBASIC2.89□□□□□ -1.95
CDH6P55285 MIR493-201ENST00000385254 89 ntBASIC2.89□□□□□ -1.95
CDH6P55285 AL590004.2-201ENST00000404787 371 ntBASIC2.89□□□□□ -1.95
CDH6P55285 AL355615.1-201ENST00000406187 641 ntBASIC2.89□□□□□ -1.95
CDH6P55285 SNORD88.1-201ENST00000408684 91 ntBASIC2.89□□□□□ -1.95
CDH6P55285 TMEM167AP1-201ENST00000423409 219 ntBASIC2.89□□□□□ -1.95
CDH6P55285 MTATP6P11-201ENST00000428071 670 ntBASIC2.89□□□□□ -1.95
CDH6P55285 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC2.89□□□□□ -1.95
CDH6P55285 Z82190.1-201ENST00000454534 490 ntBASIC2.89□□□□□ -1.95
CDH6P55285 RPS29P12-201ENST00000460178 152 ntBASIC2.89□□□□□ -1.95
CDH6P55285 RPL21P18-201ENST00000469899 480 ntBASIC2.89□□□□□ -1.95
CDH6P55285 AP001025.2-201ENST00000490908 477 ntBASIC2.89□□□□□ -1.95
CDH6P55285 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CDH6P55285 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.89□□□□□ -1.95
CDH6P55285 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.89□□□□□ -1.95
CDH6P55285 snoZ278.1-201ENST00000517059 112 ntBASIC2.89□□□□□ -1.95
CDH6P55285 AC027309.2-201ENST00000520566 192 ntBASIC2.89□□□□□ -1.95
CDH6P55285 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC2.89□□□□□ -1.95
CDH6P55285 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC2.89□□□□□ -1.95
CDH6P55285 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.89□□□□□ -1.95
CDH6P55285 MIR3200-201ENST00000580767 85 ntBASIC2.89□□□□□ -1.95
CDH6P55285 MIR3605-201ENST00000583214 100 ntBASIC2.89□□□□□ -1.95
CDH6P55285 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CDH6P55285 AC090330.1-201ENST00000588646 764 ntBASIC2.89□□□□□ -1.95
CDH6P55285 AL022099.1-201ENST00000604551 712 ntBASIC2.89□□□□□ -1.95
CDH6P55285 AC091946.2-201ENST00000606105 291 ntBASIC2.89□□□□□ -1.95
CDH6P55285 AC107871.2-201ENST00000612894 502 ntBASIC2.89□□□□□ -1.95
CDH6P55285 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.89□□□□□ -1.95
CDH6P55285 ZNF833P-201ENST00000424938 1494 ntBASIC2.89□□□□□ -1.95
CDH6P55285 ASNSP3-201ENST00000451989 1306 ntBASIC2.89□□□□□ -1.95
CDH6P55285 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CDH6P55285 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CDH6P55285 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CDH6P55285 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.88□□□□□ -1.95
CDH6P55285 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CDH6P55285 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.88□□□□□ -1.95
CDH6P55285 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CDH6P55285 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC2.88□□□□□ -1.95
CDH6P55285 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.88□□□□□ -1.95
CDH6P55285 SUGT1P1-201ENST00000379514 476 ntBASIC2.88□□□□□ -1.95
CDH6P55285 RNU6-657P-201ENST00000383904 107 ntBASIC2.88□□□□□ -1.95
CDH6P55285 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CDH6P55285 SNORA48.2-201ENST00000390926 124 ntBASIC2.88□□□□□ -1.95
CDH6P55285 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC2.88□□□□□ -1.95
CDH6P55285 AL512633.1-201ENST00000399931 655 ntBASIC2.88□□□□□ -1.95
CDH6P55285 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.88□□□□□ -1.95
CDH6P55285 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC2.88□□□□□ -1.95
CDH6P55285 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.88□□□□□ -1.95
CDH6P55285 AL139281.1-201ENST00000422120 335 ntBASIC2.88□□□□□ -1.95
CDH6P55285 AL390023.1-201ENST00000428836 262 ntBASIC2.88□□□□□ -1.95
CDH6P55285 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.88□□□□□ -1.95
CDH6P55285 MRPL42P4-201ENST00000453267 443 ntBASIC2.88□□□□□ -1.95
CDH6P55285 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.88□□□□□ -1.95
CDH6P55285 OR10V3P-201ENST00000525712 725 ntBASIC2.88□□□□□ -1.95
CDH6P55285 AL133271.1-201ENST00000538229 291 ntBASIC2.88□□□□□ -1.95
CDH6P55285 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.88□□□□□ -1.95
CDH6P55285 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.88□□□□□ -1.95
CDH6P55285 AC044913.1-201ENST00000557200 430 ntBASIC2.88□□□□□ -1.95
CDH6P55285 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.88□□□□□ -1.95
CDH6P55285 AC084035.1-201ENST00000634543 607 ntBASIC2.88□□□□□ -1.95
CDH6P55285 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.88□□□□□ -1.95
CDH6P55285 SUCLA2P2-201ENST00000417269 1309 ntBASIC2.88□□□□□ -1.95
CDH6P55285 RPL19P1-201ENST00000411635 428 ntBASIC2.87□□□□□ -1.95
CDH6P55285 RAP1BP1-201ENST00000412709 553 ntBASIC2.87□□□□□ -1.95
CDH6P55285 AL645937.1-202ENST00000421799 937 ntBASIC2.87□□□□□ -1.95
CDH6P55285 RPL27AP8-201ENST00000424277 446 ntBASIC2.87□□□□□ -1.95
CDH6P55285 EZH2P1-201ENST00000431167 291 ntBASIC2.87□□□□□ -1.95
CDH6P55285 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.87□□□□□ -1.95
CDH6P55285 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CDH6P55285 AL359385.1-201ENST00000456509 365 ntBASIC2.87□□□□□ -1.95
CDH6P55285 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.87□□□□□ -1.95
CDH6P55285 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.87□□□□□ -1.95
CDH6P55285 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CDH6P55285 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.87□□□□□ -1.95
CDH6P55285 SETP7-201ENST00000552169 453 ntBASIC2.87□□□□□ -1.95
CDH6P55285 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.87□□□□□ -1.95
CDH6P55285 AC245036.5-201ENST00000596330 847 ntBASIC2.87□□□□□ -1.95
CDH6P55285 AC005000.2-201ENST00000605468 310 ntBASIC2.87□□□□□ -1.95
CDH6P55285 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC2.87□□□□□ -1.95
CDH6P55285 AP002826.1-201ENST00000608835 315 ntBASIC2.87□□□□□ -1.95
CDH6P55285 AC073348.1-201ENST00000623002 331 ntBASIC2.87□□□□□ -1.95
CDH6P55285 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.87□□□□□ -1.95
CDH6P55285 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.86□□□□□ -1.95
CDH6P55285 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
CDH6P55285 TAB3P1-202ENST00000452645 1634 ntBASIC2.86□□□□□ -1.95
CDH6P55285 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CDH6P55285 GNG5P1-201ENST00000255500 204 ntBASIC2.86□□□□□ -1.95
CDH6P55285 RNU6-799P-201ENST00000363567 107 ntBASIC2.86□□□□□ -1.95
CDH6P55285 MIR483-201ENST00000385070 76 ntBASIC2.86□□□□□ -1.95
CDH6P55285 MIR1289-1-201ENST00000408836 144 ntBASIC2.86□□□□□ -1.95
CDH6P55285 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.86□□□□□ -1.95
CDH6P55285 PSMA6P3-201ENST00000428242 164 ntBASIC2.86□□□□□ -1.95
CDH6P55285 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.86□□□□□ -1.95
CDH6P55285 UBBP3-201ENST00000445497 241 ntBASIC2.86□□□□□ -1.95
CDH6P55285 Z96811.1-201ENST00000445880 108 ntBASIC2.86□□□□□ -1.95
CDH6P55285 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC2.86□□□□□ -1.95
CDH6P55285 COX6CP18-201ENST00000448769 222 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms