Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 OR2AS2P-201ENST00000606902 342 ntBASIC3.46□□□□□ -1.86
PDX1P52945 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.46□□□□□ -1.86
PDX1P52945 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.46□□□□□ -1.86
PDX1P52945 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.46□□□□□ -1.86
PDX1P52945 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.46□□□□□ -1.86
PDX1P52945 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.46□□□□□ -1.86
PDX1P52945 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.46□□□□□ -1.86
PDX1P52945 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PDX1P52945 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PDX1P52945 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.45□□□□□ -1.86
PDX1P52945 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.45□□□□□ -1.86
PDX1P52945 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
PDX1P52945 RNU6-837P-201ENST00000391056 108 ntBASIC3.45□□□□□ -1.86
PDX1P52945 RNA5SP120-201ENST00000410900 112 ntBASIC3.45□□□□□ -1.86
PDX1P52945 HMGB3P20-201ENST00000417997 600 ntBASIC3.45□□□□□ -1.86
PDX1P52945 AIMP1P1-201ENST00000418670 937 ntBASIC3.45□□□□□ -1.86
PDX1P52945 AC092832.1-201ENST00000422934 400 ntBASIC3.45□□□□□ -1.86
PDX1P52945 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.45□□□□□ -1.86
PDX1P52945 AC091862.1-201ENST00000438016 1100 ntBASIC3.45□□□□□ -1.86
PDX1P52945 SKP1P1-201ENST00000438081 489 ntBASIC3.45□□□□□ -1.86
PDX1P52945 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PDX1P52945 AL831737.1-201ENST00000441288 271 ntBASIC3.45□□□□□ -1.86
PDX1P52945 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.45□□□□□ -1.86
PDX1P52945 PAXBP1P1-201ENST00000449315 447 ntBASIC3.45□□□□□ -1.86
PDX1P52945 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC3.45□□□□□ -1.86
PDX1P52945 snoU109.4-201ENST00000458953 143 ntBASIC3.45□□□□□ -1.86
PDX1P52945 AP000873.1-201ENST00000463987 400 ntBASIC3.45□□□□□ -1.86
PDX1P52945 AC025518.1-201ENST00000479856 347 ntBASIC3.45□□□□□ -1.86
PDX1P52945 AL024509.2-201ENST00000493462 493 ntBASIC3.45□□□□□ -1.86
PDX1P52945 MTND5P4-201ENST00000514978 288 ntBASIC3.45□□□□□ -1.86
PDX1P52945 RNU2-27P-201ENST00000516185 142 ntBASIC3.45□□□□□ -1.86
PDX1P52945 AC106038.2-201ENST00000520706 568 ntBASIC3.45□□□□□ -1.86
PDX1P52945 AC060788.1-201ENST00000521318 469 ntBASIC3.45□□□□□ -1.86
PDX1P52945 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.45□□□□□ -1.86
PDX1P52945 AP004247.1-201ENST00000531556 1289 ntBASIC3.45□□□□□ -1.86
PDX1P52945 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.45□□□□□ -1.86
PDX1P52945 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.45□□□□□ -1.86
PDX1P52945 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.45□□□□□ -1.86
PDX1P52945 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.45□□□□□ -1.86
PDX1P52945 AC126177.3-201ENST00000551839 688 ntBASIC3.45□□□□□ -1.86
PDX1P52945 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.45□□□□□ -1.86
PDX1P52945 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.45□□□□□ -1.86
PDX1P52945 NCAPGP2-201ENST00000557911 754 ntBASIC3.45□□□□□ -1.86
PDX1P52945 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.45□□□□□ -1.86
PDX1P52945 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.45□□□□□ -1.86
PDX1P52945 AC106782.4-201ENST00000568264 210 ntBASIC3.45□□□□□ -1.86
PDX1P52945 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.45□□□□□ -1.86
PDX1P52945 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.45□□□□□ -1.86
PDX1P52945 VN1R79P-201ENST00000593540 513 ntBASIC3.45□□□□□ -1.86
PDX1P52945 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.45□□□□□ -1.86
PDX1P52945 SNRPGP15-201ENST00000600149 222 ntBASIC3.45□□□□□ -1.86
PDX1P52945 AL022161.1-201ENST00000604390 213 ntBASIC3.45□□□□□ -1.86
PDX1P52945 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.45□□□□□ -1.86
PDX1P52945 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.45□□□□□ -1.86
PDX1P52945 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.45□□□□□ -1.86
PDX1P52945 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.45□□□□□ -1.86
PDX1P52945 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.45□□□□□ -1.86
PDX1P52945 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.45□□□□□ -1.86
PDX1P52945 AC006927.3-201ENST00000638789 384 ntBASIC3.45□□□□□ -1.86
PDX1P52945 AL133383.2-201ENST00000622958 2336 ntBASIC3.45□□□□□ -1.86
PDX1P52945 ZNF833P-201ENST00000424938 1494 ntBASIC3.45□□□□□ -1.86
PDX1P52945 AL049780.3-201ENST00000624612 1583 ntBASIC3.45□□□□□ -1.86
PDX1P52945 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.45□□□□□ -1.86
PDX1P52945 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PDX1P52945 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
PDX1P52945 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.44□□□□□ -1.86
PDX1P52945 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PDX1P52945 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PDX1P52945 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.44□□□□□ -1.86
PDX1P52945 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PDX1P52945 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PDX1P52945 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
PDX1P52945 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PDX1P52945 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.44□□□□□ -1.86
PDX1P52945 XIAPP3-201ENST00000312918 795 ntBASIC3.44□□□□□ -1.86
PDX1P52945 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
PDX1P52945 RNU5F-6P-201ENST00000362979 116 ntBASIC3.44□□□□□ -1.86
PDX1P52945 RNU4-40P-201ENST00000364351 143 ntBASIC3.44□□□□□ -1.86
PDX1P52945 RNU6-335P-201ENST00000364563 113 ntBASIC3.44□□□□□ -1.86
PDX1P52945 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
PDX1P52945 SNORD116-1-201ENST00000384335 95 ntBASIC3.44□□□□□ -1.86
PDX1P52945 RNU6-769P-201ENST00000384407 104 ntBASIC3.44□□□□□ -1.86
PDX1P52945 MT-TH-201ENST00000387441 69 ntBASIC3.44□□□□□ -1.86
PDX1P52945 SNORA26.8-201ENST00000391306 124 ntBASIC3.44□□□□□ -1.86
PDX1P52945 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.44□□□□□ -1.86
PDX1P52945 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.44□□□□□ -1.86
PDX1P52945 RNU2-47P-201ENST00000410649 186 ntBASIC3.44□□□□□ -1.86
PDX1P52945 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.44□□□□□ -1.86
PDX1P52945 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.44□□□□□ -1.86
PDX1P52945 AL512649.1-201ENST00000428997 581 ntBASIC3.44□□□□□ -1.86
PDX1P52945 AC005019.1-201ENST00000436455 431 ntBASIC3.44□□□□□ -1.86
PDX1P52945 AC118469.1-201ENST00000442943 488 ntBASIC3.44□□□□□ -1.86
PDX1P52945 Z82190.1-201ENST00000454534 490 ntBASIC3.44□□□□□ -1.86
PDX1P52945 MTCO3P20-201ENST00000454926 688 ntBASIC3.44□□□□□ -1.86
PDX1P52945 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC3.44□□□□□ -1.86
PDX1P52945 OR6K1P-201ENST00000456766 971 ntBASIC3.44□□□□□ -1.86
PDX1P52945 AL122001.1-201ENST00000457027 370 ntBASIC3.44□□□□□ -1.86
PDX1P52945 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.44□□□□□ -1.86
PDX1P52945 AC010468.1-201ENST00000461022 817 ntBASIC3.44□□□□□ -1.86
PDX1P52945 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms