Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 AC002487.1-201ENST00000604565 994 ntBASIC1.88□□□□□ -2.11
CENPFP49454 RNU1-42P-201ENST00000364033 160 ntBASIC1.88□□□□□ -2.11
CENPFP49454 AC104435.1-201ENST00000483483 166 ntBASIC1.88□□□□□ -2.11
CENPFP49454 AF131216.2-201ENST00000512316 564 ntBASIC1.88□□□□□ -2.11
CENPFP49454 COX6CP5-201ENST00000527162 228 ntBASIC1.88□□□□□ -2.11
CENPFP49454 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
CENPFP49454 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
CENPFP49454 RPL23AP44-201ENST00000482216 473 ntBASIC1.87□□□□□ -2.11
CENPFP49454 RNU6-1223P-201ENST00000517124 104 ntBASIC1.87□□□□□ -2.11
CENPFP49454 AL389895.1-201ENST00000554127 252 ntBASIC1.87□□□□□ -2.11
CENPFP49454 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.87□□□□□ -2.11
CENPFP49454 MFF-206ENST00000392059 1710 ntTSL 5 BASIC1.87□□□□□ -2.11
CENPFP49454 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CENPFP49454 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.87□□□□□ -2.11
CENPFP49454 RPL23AP20-201ENST00000447965 421 ntBASIC1.87□□□□□ -2.11
CENPFP49454 AC025033.1-201ENST00000463883 194 ntBASIC1.87□□□□□ -2.11
CENPFP49454 RN7SL274P-201ENST00000492268 272 ntBASIC1.87□□□□□ -2.11
CENPFP49454 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC1.87□□□□□ -2.11
CENPFP49454 RNA5SP385-201ENST00000515947 110 ntBASIC1.87□□□□□ -2.11
CENPFP49454 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.87□□□□□ -2.11
CENPFP49454 AL391646.1-201ENST00000603860 190 ntBASIC1.87□□□□□ -2.11
CENPFP49454 AL008729.2-201ENST00000606393 473 ntBASIC1.87□□□□□ -2.11
CENPFP49454 AL122125.1-201ENST00000616999 600 ntBASIC1.87□□□□□ -2.11
CENPFP49454 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC1.87□□□□□ -2.11
CENPFP49454 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
CENPFP49454 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC1.87□□□□□ -2.11
CENPFP49454 RNU6-1032P-201ENST00000384100 107 ntBASIC1.87□□□□□ -2.11
CENPFP49454 VN1R74P-201ENST00000613259 503 ntBASIC1.87□□□□□ -2.11
CENPFP49454 BX649567.1-201ENST00000642071 1134 ntBASIC1.87□□□□□ -2.11
CENPFP49454 AC095050.2-201ENST00000510748 1458 ntBASIC1.87□□□□□ -2.11
CENPFP49454 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CENPFP49454 MIR3074-201ENST00000384885 81 ntBASIC1.86□□□□□ -2.11
CENPFP49454 UBE2V1P6-201ENST00000430840 422 ntBASIC1.86□□□□□ -2.11
CENPFP49454 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC1.86□□□□□ -2.11
CENPFP49454 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC1.86□□□□□ -2.11
CENPFP49454 AL031274.2-201ENST00000599419 203 ntBASIC1.86□□□□□ -2.11
CENPFP49454 AP000553.5-201ENST00000641933 54 ntBASIC1.86□□□□□ -2.11
CENPFP49454 ZNF355P-201ENST00000427301 3216 ntBASIC1.86□□□□□ -2.11
CENPFP49454 RPL23AP7-203ENST00000449021 469 ntBASIC1.86□□□□□ -2.11
CENPFP49454 RPS3AP23-202ENST00000574601 686 ntBASIC1.86□□□□□ -2.11
CENPFP49454 AC060766.3-201ENST00000591442 263 ntBASIC1.86□□□□□ -2.11
CENPFP49454 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.86□□□□□ -2.11
CENPFP49454 AC091895.1-201ENST00000624494 256 ntBASIC1.86□□□□□ -2.11
CENPFP49454 AC092326.2-201ENST00000624772 1561 ntBASIC1.86□□□□□ -2.11
CENPFP49454 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC1.86□□□□□ -2.11
CENPFP49454 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CENPFP49454 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC1.85□□□□□ -2.11
CENPFP49454 AC015720.1-201ENST00000565251 277 ntBASIC1.85□□□□□ -2.11
CENPFP49454 RNU1-93P-201ENST00000364704 169 ntBASIC1.85□□□□□ -2.11
CENPFP49454 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC1.85□□□□□ -2.11
CENPFP49454 RPS29P1-201ENST00000465274 159 ntBASIC1.85□□□□□ -2.11
CENPFP49454 AC011712.1-201ENST00000588959 234 ntBASIC1.85□□□□□ -2.11
CENPFP49454 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CENPFP49454 SNORA31-201ENST00000362607 130 ntBASIC1.85□□□□□ -2.11
CENPFP49454 RNU6ATAC16P-201ENST00000408591 138 ntBASIC1.85□□□□□ -2.11
CENPFP49454 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.85□□□□□ -2.11
CENPFP49454 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.85□□□□□ -2.11
CENPFP49454 HMGB1P47-201ENST00000511281 589 ntBASIC1.85□□□□□ -2.11
CENPFP49454 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC1.85□□□□□ -2.11
CENPFP49454 AC098848.2-201ENST00000588023 330 ntBASIC1.85□□□□□ -2.11
CENPFP49454 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.85□□□□□ -2.11
CENPFP49454 OR4G1P-203ENST00000641984 1631 ntBASIC1.85□□□□□ -2.11
CENPFP49454 AL121972.1-201ENST00000402023 252 ntBASIC1.84□□□□□ -2.11
CENPFP49454 AL590664.1-201ENST00000448065 339 ntBASIC1.84□□□□□ -2.11
CENPFP49454 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC1.84□□□□□ -2.11
CENPFP49454 AC008126.1-201ENST00000549019 480 ntBASIC1.84□□□□□ -2.11
CENPFP49454 AC245036.5-201ENST00000596330 847 ntBASIC1.84□□□□□ -2.11
CENPFP49454 AC080078.3-201ENST00000605407 463 ntBASIC1.84□□□□□ -2.11
CENPFP49454 AC009541.1-201ENST00000438279 2662 ntBASIC1.84□□□□□ -2.12
CENPFP49454 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
CENPFP49454 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
CENPFP49454 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.84□□□□□ -2.12
CENPFP49454 RNU6-516P-201ENST00000411381 104 ntBASIC1.84□□□□□ -2.12
CENPFP49454 AC244033.1-201ENST00000426826 870 ntBASIC1.84□□□□□ -2.12
CENPFP49454 AL121821.2-201ENST00000556081 394 ntBASIC1.84□□□□□ -2.12
CENPFP49454 AC107294.3-201ENST00000609211 526 ntBASIC1.84□□□□□ -2.12
CENPFP49454 MTCO3P30-201ENST00000426425 670 ntBASIC1.83□□□□□ -2.12
CENPFP49454 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.83□□□□□ -2.12
CENPFP49454 AC098679.5-201ENST00000624394 571 ntBASIC1.83□□□□□ -2.12
CENPFP49454 MTCO1P14-201ENST00000441695 1559 ntBASIC1.83□□□□□ -2.12
CENPFP49454 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.83□□□□□ -2.12
CENPFP49454 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC1.83□□□□□ -2.12
CENPFP49454 RFPL1S-203ENST00000539579 330 ntBASIC1.83□□□□□ -2.12
CENPFP49454 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
CENPFP49454 MTATP6P3-201ENST00000581686 676 ntBASIC1.83□□□□□ -2.12
CENPFP49454 RN7SL793P-201ENST00000583259 296 ntBASIC1.83□□□□□ -2.12
CENPFP49454 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
CENPFP49454 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.83□□□□□ -2.12
CENPFP49454 AC008568.2-201ENST00000623862 2313 ntBASIC1.83□□□□□ -2.12
CENPFP49454 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC1.83□□□□□ -2.12
CENPFP49454 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CENPFP49454 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.83□□□□□ -2.12
CENPFP49454 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.83□□□□□ -2.12
CENPFP49454 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.83□□□□□ -2.12
CENPFP49454 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.83□□□□□ -2.12
CENPFP49454 RMST_6.1-201ENST00000611980 203 ntBASIC1.83□□□□□ -2.12
CENPFP49454 AL353770.2-201ENST00000620024 78 ntBASIC1.83□□□□□ -2.12
CENPFP49454 AC073348.1-201ENST00000623002 331 ntBASIC1.83□□□□□ -2.12
CENPFP49454 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC1.83□□□□□ -2.12
CENPFP49454 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms