Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC093677.1-201ENST00000514414 678 ntBASIC3.51□□□□□ -1.85
LHX1P48742 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.51□□□□□ -1.85
LHX1P48742 RNU6-1231P-201ENST00000517185 103 ntBASIC3.51□□□□□ -1.85
LHX1P48742 IGKV2-23-201ENST00000518729 323 ntBASIC3.51□□□□□ -1.85
LHX1P48742 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.51□□□□□ -1.85
LHX1P48742 MTATP6P15-201ENST00000527233 835 ntBASIC3.51□□□□□ -1.85
LHX1P48742 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.51□□□□□ -1.85
LHX1P48742 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.51□□□□□ -1.85
LHX1P48742 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC3.51□□□□□ -1.85
LHX1P48742 AC145350.1-201ENST00000567426 208 ntBASIC3.51□□□□□ -1.85
LHX1P48742 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.51□□□□□ -1.85
LHX1P48742 MIR5680-201ENST00000577577 84 ntBASIC3.51□□□□□ -1.85
LHX1P48742 SNORD84-203ENST00000584275 78 ntBASIC3.51□□□□□ -1.85
LHX1P48742 VN1R90P-201ENST00000595717 726 ntBASIC3.51□□□□□ -1.85
LHX1P48742 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.51□□□□□ -1.85
LHX1P48742 AL606834.2-201ENST00000602954 668 ntBASIC3.51□□□□□ -1.85
LHX1P48742 AC106791.2-201ENST00000604680 391 ntBASIC3.51□□□□□ -1.85
LHX1P48742 AC024560.3-201ENST00000608482 349 ntBASIC3.51□□□□□ -1.85
LHX1P48742 AL157817.1-201ENST00000614264 790 ntBASIC3.51□□□□□ -1.85
LHX1P48742 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.51□□□□□ -1.85
LHX1P48742 MIR7112-201ENST00000616126 65 ntBASIC3.51□□□□□ -1.85
LHX1P48742 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.51□□□□□ -1.85
LHX1P48742 AL356585.4-201ENST00000623078 1229 ntBASIC3.51□□□□□ -1.85
LHX1P48742 AL356596.1-201ENST00000624230 379 ntBASIC3.51□□□□□ -1.85
LHX1P48742 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.51□□□□□ -1.85
LHX1P48742 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.51□□□□□ -1.85
LHX1P48742 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.51□□□□□ -1.85
LHX1P48742 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
LHX1P48742 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
LHX1P48742 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
LHX1P48742 AL161781.1-201ENST00000354277 403 ntBASIC3.5□□□□□ -1.85
LHX1P48742 RNU6-777P-201ENST00000364265 104 ntBASIC3.5□□□□□ -1.85
LHX1P48742 RNU6-723P-201ENST00000383973 107 ntBASIC3.5□□□□□ -1.85
LHX1P48742 AF228730.1-201ENST00000397972 663 ntBASIC3.5□□□□□ -1.85
LHX1P48742 RNU4-47P-201ENST00000410876 114 ntBASIC3.5□□□□□ -1.85
LHX1P48742 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.5□□□□□ -1.85
LHX1P48742 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
LHX1P48742 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.5□□□□□ -1.85
LHX1P48742 RPL21P66-201ENST00000426566 466 ntBASIC3.5□□□□□ -1.85
LHX1P48742 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.5□□□□□ -1.85
LHX1P48742 AL117351.1-201ENST00000438864 766 ntBASIC3.5□□□□□ -1.85
LHX1P48742 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.5□□□□□ -1.85
LHX1P48742 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC3.5□□□□□ -1.85
LHX1P48742 ARPC3P2-201ENST00000457786 533 ntBASIC3.5□□□□□ -1.85
LHX1P48742 snoU13.24-201ENST00000458998 104 ntBASIC3.5□□□□□ -1.85
LHX1P48742 MTCO2P6-201ENST00000463134 685 ntBASIC3.5□□□□□ -1.85
LHX1P48742 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
LHX1P48742 AC104563.1-201ENST00000476147 376 ntBASIC3.5□□□□□ -1.85
LHX1P48742 AC021205.2-201ENST00000480069 347 ntBASIC3.5□□□□□ -1.85
LHX1P48742 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.5□□□□□ -1.85
LHX1P48742 TXNP6-201ENST00000510190 310 ntBASIC3.5□□□□□ -1.85
LHX1P48742 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.5□□□□□ -1.85
LHX1P48742 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.5□□□□□ -1.85
LHX1P48742 RNU6-1095P-201ENST00000516148 108 ntBASIC3.5□□□□□ -1.85
LHX1P48742 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.5□□□□□ -1.85
LHX1P48742 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.5□□□□□ -1.85
LHX1P48742 AC018630.1-201ENST00000541376 925 ntBASIC3.5□□□□□ -1.85
LHX1P48742 OR7K1P-201ENST00000546439 926 ntBASIC3.5□□□□□ -1.85
LHX1P48742 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.5□□□□□ -1.85
LHX1P48742 MTND3P12-201ENST00000559068 328 ntBASIC3.5□□□□□ -1.85
LHX1P48742 AP000811.1-201ENST00000603803 651 ntBASIC3.5□□□□□ -1.85
LHX1P48742 DUXAP11-201ENST00000603858 526 ntBASIC3.5□□□□□ -1.85
LHX1P48742 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.5□□□□□ -1.85
LHX1P48742 AL031176.1-201ENST00000604554 466 ntBASIC3.5□□□□□ -1.85
LHX1P48742 AL365503.1-201ENST00000605247 905 ntBASIC3.5□□□□□ -1.85
LHX1P48742 YPEL5P2-201ENST00000605553 359 ntBASIC3.5□□□□□ -1.85
LHX1P48742 AC090186.1-201ENST00000605991 572 ntBASIC3.5□□□□□ -1.85
LHX1P48742 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.5□□□□□ -1.85
LHX1P48742 AL590282.1-201ENST00000610379 1136 ntBASIC3.5□□□□□ -1.85
LHX1P48742 AL442067.2-201ENST00000614033 363 ntBASIC3.5□□□□□ -1.85
LHX1P48742 AC120349.3-201ENST00000624377 529 ntBASIC3.5□□□□□ -1.85
LHX1P48742 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.5□□□□□ -1.85
LHX1P48742 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
LHX1P48742 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.5□□□□□ -1.85
LHX1P48742 AC058791.1-201ENST00000608412 3198 ntBASIC3.5□□□□□ -1.85
LHX1P48742 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
LHX1P48742 AC093908.1-201ENST00000623125 8092 ntBASIC3.5□□□□□ -1.85
LHX1P48742 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
LHX1P48742 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.49□□□□□ -1.85
LHX1P48742 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
LHX1P48742 Y_RNA.234-201ENST00000364409 97 ntBASIC3.49□□□□□ -1.85
LHX1P48742 RNA5SP88-201ENST00000365560 109 ntBASIC3.49□□□□□ -1.85
LHX1P48742 AL357075.1-201ENST00000404107 726 ntBASIC3.49□□□□□ -1.85
LHX1P48742 MIR320C1-201ENST00000408566 88 ntBASIC3.49□□□□□ -1.85
LHX1P48742 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.49□□□□□ -1.85
LHX1P48742 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC3.49□□□□□ -1.85
LHX1P48742 AL137014.1-201ENST00000420490 1226 ntBASIC3.49□□□□□ -1.85
LHX1P48742 AL593851.1-201ENST00000426171 157 ntBASIC3.49□□□□□ -1.85
LHX1P48742 RPL7P34-201ENST00000433316 712 ntBASIC3.49□□□□□ -1.85
LHX1P48742 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.49□□□□□ -1.85
LHX1P48742 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC3.49□□□□□ -1.85
LHX1P48742 AC091862.1-201ENST00000438016 1100 ntBASIC3.49□□□□□ -1.85
LHX1P48742 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC3.49□□□□□ -1.85
LHX1P48742 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC3.49□□□□□ -1.85
LHX1P48742 Z75741.1-201ENST00000446793 314 ntBASIC3.49□□□□□ -1.85
LHX1P48742 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.49□□□□□ -1.85
LHX1P48742 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.49□□□□□ -1.85
LHX1P48742 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.49□□□□□ -1.85
LHX1P48742 AC017015.1-201ENST00000477387 286 ntBASIC3.49□□□□□ -1.85
LHX1P48742 RPS3AP22-201ENST00000488297 769 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms