Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.2□□□□□ -1.9
NKX2-1P43699 RNA5SP129-201ENST00000410276 118 ntBASIC3.2□□□□□ -1.9
NKX2-1P43699 RNU4-25P-201ENST00000410569 230 ntBASIC3.2□□□□□ -1.9
NKX2-1P43699 AL353777.1-201ENST00000425552 326 ntBASIC3.2□□□□□ -1.9
NKX2-1P43699 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.2□□□□□ -1.9
NKX2-1P43699 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC3.2□□□□□ -1.9
NKX2-1P43699 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.2□□□□□ -1.9
NKX2-1P43699 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.2□□□□□ -1.9
NKX2-1P43699 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.2□□□□□ -1.9
NKX2-1P43699 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.2□□□□□ -1.9
NKX2-1P43699 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.2□□□□□ -1.9
NKX2-1P43699 HMGN2P16-201ENST00000456802 261 ntBASIC3.2□□□□□ -1.9
NKX2-1P43699 RPL23AP24-201ENST00000458203 385 ntBASIC3.2□□□□□ -1.9
NKX2-1P43699 OR9M1P-201ENST00000459641 921 ntBASIC3.2□□□□□ -1.9
NKX2-1P43699 RPL23AP62-201ENST00000463396 453 ntBASIC3.2□□□□□ -1.9
NKX2-1P43699 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
NKX2-1P43699 RN7SL481P-201ENST00000477764 299 ntBASIC3.2□□□□□ -1.9
NKX2-1P43699 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.2□□□□□ -1.9
NKX2-1P43699 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.2□□□□□ -1.9
NKX2-1P43699 AC008958.1-201ENST00000511047 682 ntBASIC3.2□□□□□ -1.9
NKX2-1P43699 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.2□□□□□ -1.9
NKX2-1P43699 RN7SKP209-201ENST00000516888 304 ntBASIC3.2□□□□□ -1.9
NKX2-1P43699 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.2□□□□□ -1.9
NKX2-1P43699 DEFB108D-201ENST00000527787 222 ntBASIC3.2□□□□□ -1.9
NKX2-1P43699 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.2□□□□□ -1.9
NKX2-1P43699 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.2□□□□□ -1.9
NKX2-1P43699 TRAV8-5-201ENST00000537369 341 ntBASIC3.2□□□□□ -1.9
NKX2-1P43699 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.2□□□□□ -1.9
NKX2-1P43699 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.2□□□□□ -1.9
NKX2-1P43699 AL391156.1-201ENST00000554965 554 ntBASIC3.2□□□□□ -1.9
NKX2-1P43699 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.2□□□□□ -1.9
NKX2-1P43699 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.2□□□□□ -1.9
NKX2-1P43699 AC010546.1-201ENST00000569391 485 ntBASIC3.2□□□□□ -1.9
NKX2-1P43699 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.2□□□□□ -1.9
NKX2-1P43699 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.2□□□□□ -1.9
NKX2-1P43699 ZNF415P1-201ENST00000582279 1166 ntBASIC3.2□□□□□ -1.9
NKX2-1P43699 MIR3611-201ENST00000584484 83 ntBASIC3.2□□□□□ -1.9
NKX2-1P43699 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.2□□□□□ -1.9
NKX2-1P43699 AC146944.4-201ENST00000602697 718 ntBASIC3.2□□□□□ -1.9
NKX2-1P43699 AC078795.2-201ENST00000602835 1252 ntBASIC3.2□□□□□ -1.9
NKX2-1P43699 AC091965.4-201ENST00000607691 587 ntBASIC3.2□□□□□ -1.9
NKX2-1P43699 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.2□□□□□ -1.9
NKX2-1P43699 AP001506.1-201ENST00000615444 211 ntBASIC3.2□□□□□ -1.9
NKX2-1P43699 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.2□□□□□ -1.9
NKX2-1P43699 AC099654.13-201ENST00000639774 207 ntBASIC3.2□□□□□ -1.9
NKX2-1P43699 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
NKX2-1P43699 MTND5P29-201ENST00000458676 1807 ntBASIC3.2□□□□□ -1.9
NKX2-1P43699 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.2□□□□□ -1.9
NKX2-1P43699 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.2□□□□□ -1.9
NKX2-1P43699 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
NKX2-1P43699 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
NKX2-1P43699 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.2□□□□□ -1.9
NKX2-1P43699 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
NKX2-1P43699 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
NKX2-1P43699 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
NKX2-1P43699 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NKX2-1P43699 AC005832.2-201ENST00000538921 1430 ntBASIC3.19□□□□□ -1.9
NKX2-1P43699 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.19□□□□□ -1.9
NKX2-1P43699 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
NKX2-1P43699 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NKX2-1P43699 SDAD1P2-201ENST00000441308 2028 ntBASIC3.19□□□□□ -1.9
NKX2-1P43699 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NKX2-1P43699 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NKX2-1P43699 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
NKX2-1P43699 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NKX2-1P43699 RNA5SP447-201ENST00000363749 119 ntBASIC3.19□□□□□ -1.9
NKX2-1P43699 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NKX2-1P43699 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.19□□□□□ -1.9
NKX2-1P43699 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.19□□□□□ -1.9
NKX2-1P43699 MIR585-201ENST00000384887 94 ntBASIC3.19□□□□□ -1.9
NKX2-1P43699 MTCYBP36-201ENST00000404146 440 ntBASIC3.19□□□□□ -1.9
NKX2-1P43699 ELOCP19-201ENST00000411919 318 ntBASIC3.19□□□□□ -1.9
NKX2-1P43699 HMGN1P24-201ENST00000412282 298 ntBASIC3.19□□□□□ -1.9
NKX2-1P43699 RPL30P2-201ENST00000414021 291 ntBASIC3.19□□□□□ -1.9
NKX2-1P43699 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.19□□□□□ -1.9
NKX2-1P43699 AC233728.2-201ENST00000425348 757 ntBASIC3.19□□□□□ -1.9
NKX2-1P43699 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC3.19□□□□□ -1.9
NKX2-1P43699 MTATP6P4-201ENST00000427725 675 ntBASIC3.19□□□□□ -1.9
NKX2-1P43699 DLGAP5P1-201ENST00000430307 464 ntBASIC3.19□□□□□ -1.9
NKX2-1P43699 AC090774.1-201ENST00000435925 246 ntBASIC3.19□□□□□ -1.9
NKX2-1P43699 Z74696.2-201ENST00000436514 498 ntBASIC3.19□□□□□ -1.9
NKX2-1P43699 AC083863.1-201ENST00000438811 231 ntBASIC3.19□□□□□ -1.9
NKX2-1P43699 RAC1P7-201ENST00000445367 377 ntBASIC3.19□□□□□ -1.9
NKX2-1P43699 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.19□□□□□ -1.9
NKX2-1P43699 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NKX2-1P43699 AL590365.1-201ENST00000450788 243 ntBASIC3.19□□□□□ -1.9
NKX2-1P43699 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.19□□□□□ -1.9
NKX2-1P43699 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.19□□□□□ -1.9
NKX2-1P43699 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.19□□□□□ -1.9
NKX2-1P43699 MTCO1P42-201ENST00000457379 726 ntBASIC3.19□□□□□ -1.9
NKX2-1P43699 AC114967.1-201ENST00000504890 259 ntBASIC3.19□□□□□ -1.9
NKX2-1P43699 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
NKX2-1P43699 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
NKX2-1P43699 CDC42P4-201ENST00000510507 563 ntBASIC3.19□□□□□ -1.9
NKX2-1P43699 AC026801.2-201ENST00000515352 425 ntBASIC3.19□□□□□ -1.9
NKX2-1P43699 RNU1-61P-201ENST00000516107 151 ntBASIC3.19□□□□□ -1.9
NKX2-1P43699 RNU6-720P-201ENST00000516363 108 ntBASIC3.19□□□□□ -1.9
NKX2-1P43699 CDH12P4-201ENST00000517835 295 ntBASIC3.19□□□□□ -1.9
NKX2-1P43699 CDH12P3-201ENST00000517935 295 ntBASIC3.19□□□□□ -1.9
NKX2-1P43699 CDH12P1-201ENST00000518435 295 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 140.8 ms