Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AL021397.1-201ENST00000451806 248 ntBASIC1.83□□□□□ -2.12
HTTP42858 SNORD53B-201ENST00000577887 78 ntBASIC1.83□□□□□ -2.12
HTTP42858 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC1.83□□□□□ -2.12
HTTP42858 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
HTTP42858 FAM35CP-201ENST00000554755 2470 ntBASIC1.83□□□□□ -2.12
HTTP42858 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.83□□□□□ -2.12
HTTP42858 UBE2V1P6-201ENST00000430840 422 ntBASIC1.83□□□□□ -2.12
HTTP42858 RPS29P29-201ENST00000456396 171 ntBASIC1.83□□□□□ -2.12
HTTP42858 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC1.83□□□□□ -2.12
HTTP42858 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.83□□□□□ -2.12
HTTP42858 MFF-206ENST00000392059 1710 ntTSL 5 BASIC1.82□□□□□ -2.12
HTTP42858 HAR1A.1-201ENST00000459583 118 ntBASIC1.82□□□□□ -2.12
HTTP42858 AF186190.1-201ENST00000517470 480 ntBASIC1.82□□□□□ -2.12
HTTP42858 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC1.82□□□□□ -2.12
HTTP42858 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
HTTP42858 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.82□□□□□ -2.12
HTTP42858 AC015720.1-201ENST00000565251 277 ntBASIC1.82□□□□□ -2.12
HTTP42858 MTATP6P3-201ENST00000581686 676 ntBASIC1.82□□□□□ -2.12
HTTP42858 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC1.82□□□□□ -2.12
HTTP42858 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.82□□□□□ -2.12
HTTP42858 AC073136.2-201ENST00000417282 849 ntBASIC1.82□□□□□ -2.12
HTTP42858 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.82□□□□□ -2.12
HTTP42858 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC1.82□□□□□ -2.12
HTTP42858 RNA5SP344-201ENST00000411081 104 ntBASIC1.82□□□□□ -2.12
HTTP42858 AC244033.1-201ENST00000426826 870 ntBASIC1.82□□□□□ -2.12
HTTP42858 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
HTTP42858 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.82□□□□□ -2.12
HTTP42858 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC1.82□□□□□ -2.12
HTTP42858 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.82□□□□□ -2.12
HTTP42858 RMST_6.1-201ENST00000611980 203 ntBASIC1.82□□□□□ -2.12
HTTP42858 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC1.82□□□□□ -2.12
HTTP42858 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC1.81□□□□□ -2.12
HTTP42858 RNU1-22P-201ENST00000363334 158 ntBASIC1.81□□□□□ -2.12
HTTP42858 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
HTTP42858 RNY1P4-201ENST00000384595 115 ntBASIC1.81□□□□□ -2.12
HTTP42858 MTCYBP7-201ENST00000419540 1134 ntBASIC1.81□□□□□ -2.12
HTTP42858 AL159169.1-201ENST00000421119 127 ntBASIC1.81□□□□□ -2.12
HTTP42858 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.81□□□□□ -2.12
HTTP42858 AL589765.3-201ENST00000446084 462 ntBASIC1.81□□□□□ -2.12
HTTP42858 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.81□□□□□ -2.12
HTTP42858 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.81□□□□□ -2.12
HTTP42858 AC109471.1-201ENST00000511631 612 ntBASIC1.81□□□□□ -2.12
HTTP42858 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.81□□□□□ -2.12
HTTP42858 MIR4644-201ENST00000579929 84 ntBASIC1.81□□□□□ -2.12
HTTP42858 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC1.81□□□□□ -2.12
HTTP42858 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
HTTP42858 BX510359.4-201ENST00000423750 193 ntBASIC1.81□□□□□ -2.12
HTTP42858 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.81□□□□□ -2.12
HTTP42858 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC1.81□□□□□ -2.12
HTTP42858 MIR151B-201ENST00000584249 96 ntBASIC1.81□□□□□ -2.12
HTTP42858 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.81□□□□□ -2.12
HTTP42858 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
HTTP42858 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
HTTP42858 AL365400.1-201ENST00000431854 640 ntBASIC1.8□□□□□ -2.12
HTTP42858 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC1.8□□□□□ -2.12
HTTP42858 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC1.8□□□□□ -2.12
HTTP42858 FABP5P6-201ENST00000510588 409 ntBASIC1.8□□□□□ -2.12
HTTP42858 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.8□□□□□ -2.12
HTTP42858 AL353770.2-201ENST00000620024 78 ntBASIC1.8□□□□□ -2.12
HTTP42858 DDX10P1-201ENST00000448545 1933 ntBASIC1.8□□□□□ -2.12
HTTP42858 WWP1P1-201ENST00000466609 2769 ntBASIC1.8□□□□□ -2.12
HTTP42858 RNU6-1032P-201ENST00000384100 107 ntBASIC1.8□□□□□ -2.12
HTTP42858 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.8□□□□□ -2.12
HTTP42858 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.8□□□□□ -2.12
HTTP42858 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
HTTP42858 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC1.8□□□□□ -2.12
HTTP42858 RNU6-37P-201ENST00000362692 107 ntBASIC1.8□□□□□ -2.12
HTTP42858 RNU6-11P-201ENST00000364234 107 ntBASIC1.8□□□□□ -2.12
HTTP42858 AC034222.1-201ENST00000494052 532 ntBASIC1.8□□□□□ -2.12
HTTP42858 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.8□□□□□ -2.12
HTTP42858 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC1.8□□□□□ -2.12
HTTP42858 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.8□□□□□ -2.12
HTTP42858 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.8□□□□□ -2.12
HTTP42858 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
HTTP42858 AL136133.1-201ENST00000413694 376 ntBASIC1.79□□□□□ -2.12
HTTP42858 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC1.79□□□□□ -2.12
HTTP42858 GTF2IP9-201ENST00000502460 301 ntBASIC1.79□□□□□ -2.12
HTTP42858 AC022790.1-201ENST00000522872 204 ntBASIC1.79□□□□□ -2.12
HTTP42858 AC245036.5-201ENST00000596330 847 ntBASIC1.79□□□□□ -2.12
HTTP42858 AC092954.1-201ENST00000609121 445 ntBASIC1.79□□□□□ -2.12
HTTP42858 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
HTTP42858 AC069528.1-202ENST00000482888 637 ntBASIC1.79□□□□□ -2.12
HTTP42858 AC002487.1-201ENST00000604565 994 ntBASIC1.79□□□□□ -2.12
HTTP42858 AC080078.3-201ENST00000605407 463 ntBASIC1.79□□□□□ -2.12
HTTP42858 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC1.79□□□□□ -2.12
HTTP42858 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
HTTP42858 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
HTTP42858 OR7L1P-201ENST00000456181 380 ntBASIC1.78□□□□□ -2.12
HTTP42858 AC109486.1-201ENST00000486833 374 ntBASIC1.78□□□□□ -2.12
HTTP42858 RNU6-1223P-201ENST00000517124 104 ntBASIC1.78□□□□□ -2.12
HTTP42858 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC1.78□□□□□ -2.12
HTTP42858 AC012150.2-201ENST00000621300 544 ntBASIC1.78□□□□□ -2.12
HTTP42858 AC095050.2-201ENST00000510748 1458 ntBASIC1.78□□□□□ -2.12
HTTP42858 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC1.78□□□□□ -2.12
HTTP42858 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
HTTP42858 RN7SKP123-201ENST00000410732 291 ntBASIC1.78□□□□□ -2.12
HTTP42858 RPL7P46-201ENST00000425129 740 ntBASIC1.78□□□□□ -2.12
HTTP42858 AL645568.3-201ENST00000433683 316 ntBASIC1.78□□□□□ -2.12
HTTP42858 HMGN1P8-201ENST00000463578 288 ntBASIC1.78□□□□□ -2.12
HTTP42858 RPS29P1-201ENST00000465274 159 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms