Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.81□□□□□ -1.96
TNFSF9P41273 MTND4LP10-201ENST00000435146 291 ntBASIC2.81□□□□□ -1.96
TNFSF9P41273 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC2.81□□□□□ -1.96
TNFSF9P41273 MTCYBP34-201ENST00000439552 670 ntBASIC2.81□□□□□ -1.96
TNFSF9P41273 AL645638.1-201ENST00000440519 361 ntBASIC2.81□□□□□ -1.96
TNFSF9P41273 AC011816.1-201ENST00000441346 546 ntBASIC2.81□□□□□ -1.96
TNFSF9P41273 RPL32P28-201ENST00000443577 397 ntBASIC2.81□□□□□ -1.96
TNFSF9P41273 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.81□□□□□ -1.96
TNFSF9P41273 CCNB1IP1P3-201ENST00000454702 829 ntBASIC2.81□□□□□ -1.96
TNFSF9P41273 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC2.81□□□□□ -1.96
TNFSF9P41273 RN7SL297P-201ENST00000483161 293 ntBASIC2.81□□□□□ -1.96
TNFSF9P41273 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.81□□□□□ -1.96
TNFSF9P41273 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC2.81□□□□□ -1.96
TNFSF9P41273 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.81□□□□□ -1.96
TNFSF9P41273 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.81□□□□□ -1.96
TNFSF9P41273 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.81□□□□□ -1.96
TNFSF9P41273 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.81□□□□□ -1.96
TNFSF9P41273 CBX3P3-201ENST00000508108 532 ntBASIC2.81□□□□□ -1.96
TNFSF9P41273 AC017037.2-201ENST00000513850 890 ntBASIC2.81□□□□□ -1.96
TNFSF9P41273 RNA5SP135-201ENST00000517019 125 ntBASIC2.81□□□□□ -1.96
TNFSF9P41273 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC2.81□□□□□ -1.96
TNFSF9P41273 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.81□□□□□ -1.96
TNFSF9P41273 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC2.81□□□□□ -1.96
TNFSF9P41273 AC018630.1-201ENST00000541376 925 ntBASIC2.81□□□□□ -1.96
TNFSF9P41273 EEF1B2P4-201ENST00000551398 348 ntBASIC2.81□□□□□ -1.96
TNFSF9P41273 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.81□□□□□ -1.96
TNFSF9P41273 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.81□□□□□ -1.96
TNFSF9P41273 AL157394.1-201ENST00000562983 1224 ntBASIC2.81□□□□□ -1.96
TNFSF9P41273 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.81□□□□□ -1.96
TNFSF9P41273 AC026790.2-201ENST00000606282 430 ntBASIC2.81□□□□□ -1.96
TNFSF9P41273 AL451074.6-201ENST00000608512 729 ntBASIC2.81□□□□□ -1.96
TNFSF9P41273 AC092608.2-201ENST00000624427 218 ntBASIC2.81□□□□□ -1.96
TNFSF9P41273 AC091925.2-201ENST00000625059 256 ntBASIC2.81□□□□□ -1.96
TNFSF9P41273 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.81□□□□□ -1.96
TNFSF9P41273 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
TNFSF9P41273 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
TNFSF9P41273 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
TNFSF9P41273 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.8□□□□□ -1.96
TNFSF9P41273 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.8□□□□□ -1.96
TNFSF9P41273 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.8□□□□□ -1.96
TNFSF9P41273 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
TNFSF9P41273 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC2.8□□□□□ -1.96
TNFSF9P41273 AL672167.1-206ENST00000356293 943 ntBASIC2.8□□□□□ -1.96
TNFSF9P41273 SNORA51.6-201ENST00000384151 125 ntBASIC2.8□□□□□ -1.96
TNFSF9P41273 RPS3AP26-201ENST00000398259 784 ntBASIC2.8□□□□□ -1.96
TNFSF9P41273 AL445529.1-201ENST00000398713 389 ntBASIC2.8□□□□□ -1.96
TNFSF9P41273 AL133264.1-201ENST00000407157 562 ntBASIC2.8□□□□□ -1.96
TNFSF9P41273 SNORD88.1-201ENST00000408684 91 ntBASIC2.8□□□□□ -1.96
TNFSF9P41273 SSXP9-201ENST00000417503 292 ntBASIC2.8□□□□□ -1.96
TNFSF9P41273 SDCBPP3-201ENST00000419629 891 ntBASIC2.8□□□□□ -1.96
TNFSF9P41273 RPL7P46-201ENST00000425129 740 ntBASIC2.8□□□□□ -1.96
TNFSF9P41273 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.8□□□□□ -1.96
TNFSF9P41273 AL390023.1-201ENST00000428836 262 ntBASIC2.8□□□□□ -1.96
TNFSF9P41273 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC2.8□□□□□ -1.96
TNFSF9P41273 AC104472.2-201ENST00000469035 601 ntBASIC2.8□□□□□ -1.96
TNFSF9P41273 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC2.8□□□□□ -1.96
TNFSF9P41273 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC2.8□□□□□ -1.96
TNFSF9P41273 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
TNFSF9P41273 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.8□□□□□ -1.96
TNFSF9P41273 AC010486.1-201ENST00000511793 424 ntBASIC2.8□□□□□ -1.96
TNFSF9P41273 AC010265.1-201ENST00000513509 211 ntBASIC2.8□□□□□ -1.96
TNFSF9P41273 AC027338.1-201ENST00000514840 825 ntBASIC2.8□□□□□ -1.96
TNFSF9P41273 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.8□□□□□ -1.96
TNFSF9P41273 RNA5SP148-201ENST00000516527 94 ntBASIC2.8□□□□□ -1.96
TNFSF9P41273 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.8□□□□□ -1.96
TNFSF9P41273 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
TNFSF9P41273 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.8□□□□□ -1.96
TNFSF9P41273 AC234778.2-201ENST00000566241 354 ntBASIC2.8□□□□□ -1.96
TNFSF9P41273 MIR4435-1-201ENST00000582552 80 ntBASIC2.8□□□□□ -1.96
TNFSF9P41273 MIR3124-201ENST00000582636 67 ntBASIC2.8□□□□□ -1.96
TNFSF9P41273 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.8□□□□□ -1.96
TNFSF9P41273 AC106791.2-201ENST00000604680 391 ntBASIC2.8□□□□□ -1.96
TNFSF9P41273 AC073387.2-201ENST00000604797 784 ntBASIC2.8□□□□□ -1.96
TNFSF9P41273 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.8□□□□□ -1.96
TNFSF9P41273 AL021368.1-201ENST00000607490 540 ntBASIC2.8□□□□□ -1.96
TNFSF9P41273 MIR6817-201ENST00000615588 66 ntBASIC2.8□□□□□ -1.96
TNFSF9P41273 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.8□□□□□ -1.96
TNFSF9P41273 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.8□□□□□ -1.96
TNFSF9P41273 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
TNFSF9P41273 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.8□□□□□ -1.96
TNFSF9P41273 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.79□□□□□ -1.96
TNFSF9P41273 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
TNFSF9P41273 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.79□□□□□ -1.96
TNFSF9P41273 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.79□□□□□ -1.96
TNFSF9P41273 RNU6-251P-201ENST00000363235 104 ntBASIC2.79□□□□□ -1.96
TNFSF9P41273 AC016769.3-201ENST00000396562 315 ntBASIC2.79□□□□□ -1.96
TNFSF9P41273 CYCSP45-201ENST00000402289 315 ntBASIC2.79□□□□□ -1.96
TNFSF9P41273 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.79□□□□□ -1.96
TNFSF9P41273 RNU6-575P-201ENST00000411326 105 ntBASIC2.79□□□□□ -1.96
TNFSF9P41273 NDUFB4P5-201ENST00000415445 361 ntBASIC2.79□□□□□ -1.96
TNFSF9P41273 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC2.79□□□□□ -1.96
TNFSF9P41273 RPL21P32-201ENST00000419877 477 ntBASIC2.79□□□□□ -1.96
TNFSF9P41273 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.79□□□□□ -1.96
TNFSF9P41273 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.79□□□□□ -1.96
TNFSF9P41273 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.79□□□□□ -1.96
TNFSF9P41273 AC093392.2-201ENST00000450682 337 ntBASIC2.79□□□□□ -1.96
TNFSF9P41273 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.79□□□□□ -1.96
TNFSF9P41273 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.79□□□□□ -1.96
TNFSF9P41273 RPL21P18-201ENST00000469899 480 ntBASIC2.79□□□□□ -1.96
TNFSF9P41273 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 146.4 ms