Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC2.84□□□□□ -1.95
BRCA1P38398 AC097714.1-201ENST00000511272 1647 ntBASIC2.84□□□□□ -1.96
BRCA1P38398 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.84□□□□□ -1.96
BRCA1P38398 RNU1-17P-201ENST00000363022 152 ntBASIC2.84□□□□□ -1.96
BRCA1P38398 RNA5SP456-201ENST00000364002 114 ntBASIC2.84□□□□□ -1.96
BRCA1P38398 SNORA51.2-201ENST00000364595 132 ntBASIC2.84□□□□□ -1.96
BRCA1P38398 RNU1-91P-201ENST00000364746 163 ntBASIC2.84□□□□□ -1.96
BRCA1P38398 MIR607-201ENST00000385241 96 ntBASIC2.84□□□□□ -1.96
BRCA1P38398 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
BRCA1P38398 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC2.84□□□□□ -1.96
BRCA1P38398 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC2.84□□□□□ -1.96
BRCA1P38398 RPS20P24-201ENST00000457473 361 ntBASIC2.84□□□□□ -1.96
BRCA1P38398 AC010301.1-201ENST00000473936 355 ntBASIC2.84□□□□□ -1.96
BRCA1P38398 RN7SL297P-201ENST00000483161 293 ntBASIC2.84□□□□□ -1.96
BRCA1P38398 AC092185.1-201ENST00000491371 97 ntBASIC2.84□□□□□ -1.96
BRCA1P38398 AP000857.1-201ENST00000532151 543 ntBASIC2.84□□□□□ -1.96
BRCA1P38398 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.84□□□□□ -1.96
BRCA1P38398 OR4H12P-201ENST00000556269 907 ntBASIC2.84□□□□□ -1.96
BRCA1P38398 ZNF192P1-203ENST00000565888 810 ntBASIC2.84□□□□□ -1.96
BRCA1P38398 AC124283.4-201ENST00000581815 456 ntBASIC2.84□□□□□ -1.96
BRCA1P38398 MIR5007-201ENST00000583098 95 ntBASIC2.84□□□□□ -1.96
BRCA1P38398 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC2.84□□□□□ -1.96
BRCA1P38398 AC011494.1-201ENST00000596454 237 ntBASIC2.84□□□□□ -1.96
BRCA1P38398 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.84□□□□□ -1.96
BRCA1P38398 ZNF92P2-201ENST00000600543 1059 ntBASIC2.84□□□□□ -1.96
BRCA1P38398 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
BRCA1P38398 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC2.83□□□□□ -1.96
BRCA1P38398 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
BRCA1P38398 MTND4P34-201ENST00000572715 1371 ntBASIC2.83□□□□□ -1.96
BRCA1P38398 RNU6-543P-201ENST00000362576 108 ntBASIC2.83□□□□□ -1.96
BRCA1P38398 RNU6-251P-201ENST00000363235 104 ntBASIC2.83□□□□□ -1.96
BRCA1P38398 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.83□□□□□ -1.96
BRCA1P38398 EI24P1-201ENST00000416584 867 ntBASIC2.83□□□□□ -1.96
BRCA1P38398 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC2.83□□□□□ -1.96
BRCA1P38398 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.83□□□□□ -1.96
BRCA1P38398 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.83□□□□□ -1.96
BRCA1P38398 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.83□□□□□ -1.96
BRCA1P38398 MTND5P21-201ENST00000531961 522 ntBASIC2.83□□□□□ -1.96
BRCA1P38398 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.83□□□□□ -1.96
BRCA1P38398 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.83□□□□□ -1.96
BRCA1P38398 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.83□□□□□ -1.96
BRCA1P38398 AC106730.3-201ENST00000624568 641 ntBASIC2.83□□□□□ -1.96
BRCA1P38398 MTND5P11-201ENST00000511037 1812 ntBASIC2.83□□□□□ -1.96
BRCA1P38398 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
BRCA1P38398 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
BRCA1P38398 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
BRCA1P38398 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
BRCA1P38398 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
BRCA1P38398 RNU6-1226P-201ENST00000384317 107 ntBASIC2.82□□□□□ -1.96
BRCA1P38398 SNORA41-201ENST00000384675 132 ntBASIC2.82□□□□□ -1.96
BRCA1P38398 TMSB4XP8-201ENST00000402089 135 ntBASIC2.82□□□□□ -1.96
BRCA1P38398 AL591416.1-201ENST00000404015 867 ntBASIC2.82□□□□□ -1.96
BRCA1P38398 UBE2V1P15-201ENST00000407776 448 ntBASIC2.82□□□□□ -1.96
BRCA1P38398 MIR1287-201ENST00000408492 90 ntBASIC2.82□□□□□ -1.96
BRCA1P38398 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
BRCA1P38398 AL139156.1-201ENST00000412785 841 ntBASIC2.82□□□□□ -1.96
BRCA1P38398 TMSB4XP6-201ENST00000415187 135 ntBASIC2.82□□□□□ -1.96
BRCA1P38398 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.82□□□□□ -1.96
BRCA1P38398 RPL21P32-201ENST00000419877 477 ntBASIC2.82□□□□□ -1.96
BRCA1P38398 AC099677.1-201ENST00000420575 175 ntBASIC2.82□□□□□ -1.96
BRCA1P38398 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.82□□□□□ -1.96
BRCA1P38398 TMSB4XP1-201ENST00000424567 135 ntBASIC2.82□□□□□ -1.96
BRCA1P38398 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC2.82□□□□□ -1.96
BRCA1P38398 AC004865.1-201ENST00000442276 1003 ntBASIC2.82□□□□□ -1.96
BRCA1P38398 AC007677.1-201ENST00000445757 515 ntBASIC2.82□□□□□ -1.96
BRCA1P38398 MTCO3P11-201ENST00000455103 774 ntBASIC2.82□□□□□ -1.96
BRCA1P38398 AC104472.2-201ENST00000469035 601 ntBASIC2.82□□□□□ -1.96
BRCA1P38398 RPL23AP70-201ENST00000483361 460 ntBASIC2.82□□□□□ -1.96
BRCA1P38398 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC2.82□□□□□ -1.96
BRCA1P38398 TRAV31-201ENST00000502780 342 ntBASIC2.82□□□□□ -1.96
BRCA1P38398 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.82□□□□□ -1.96
BRCA1P38398 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC2.82□□□□□ -1.96
BRCA1P38398 MTCYBP20-201ENST00000524239 1129 ntBASIC2.82□□□□□ -1.96
BRCA1P38398 OSBPL9P3-201ENST00000534523 595 ntBASIC2.82□□□□□ -1.96
BRCA1P38398 AC055876.1-202ENST00000567053 138 ntBASIC2.82□□□□□ -1.96
BRCA1P38398 FRG1HP-204ENST00000617940 757 ntBASIC2.82□□□□□ -1.96
BRCA1P38398 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
BRCA1P38398 AC138649.5-201ENST00000637456 137 ntBASIC2.82□□□□□ -1.96
BRCA1P38398 MFSD8-213ENST00000641134 1327 ntBASIC2.82□□□□□ -1.96
BRCA1P38398 AC091152.2-201ENST00000591628 2569 ntBASIC2.82□□□□□ -1.96
BRCA1P38398 AC011460.1-201ENST00000636268 1834 ntBASIC2.82□□□□□ -1.96
BRCA1P38398 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.82□□□□□ -1.96
BRCA1P38398 AL356292.1-201ENST00000283110 373 ntBASIC2.82□□□□□ -1.96
BRCA1P38398 RNU6-1249P-201ENST00000363237 111 ntBASIC2.82□□□□□ -1.96
BRCA1P38398 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC2.82□□□□□ -1.96
BRCA1P38398 RNU6-1181P-201ENST00000384191 106 ntBASIC2.82□□□□□ -1.96
BRCA1P38398 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.82□□□□□ -1.96
BRCA1P38398 RNU4-65P-201ENST00000410473 140 ntBASIC2.82□□□□□ -1.96
BRCA1P38398 SPA17P1-201ENST00000416656 452 ntBASIC2.82□□□□□ -1.96
BRCA1P38398 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC2.82□□□□□ -1.96
BRCA1P38398 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.82□□□□□ -1.96
BRCA1P38398 AC011816.1-201ENST00000441346 546 ntBASIC2.82□□□□□ -1.96
BRCA1P38398 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC2.82□□□□□ -1.96
BRCA1P38398 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC2.82□□□□□ -1.96
BRCA1P38398 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
BRCA1P38398 AC010468.3-201ENST00000508225 458 ntBASIC2.82□□□□□ -1.96
BRCA1P38398 AC004062.1-201ENST00000509926 645 ntBASIC2.82□□□□□ -1.96
BRCA1P38398 AC026412.2-201ENST00000512270 1075 ntBASIC2.82□□□□□ -1.96
BRCA1P38398 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC2.82□□□□□ -1.96
BRCA1P38398 SCARNA17.1-201ENST00000516211 143 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms