Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 AC068135.1-201ENST00000446164 246 ntBASIC2.7□□□□□ -1.98
SCN4AP35499 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC2.7□□□□□ -1.98
SCN4AP35499 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
SCN4AP35499 MTND4LP22-201ENST00000508209 276 ntBASIC2.7□□□□□ -1.98
SCN4AP35499 AC025768.1-201ENST00000510057 267 ntBASIC2.7□□□□□ -1.98
SCN4AP35499 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.7□□□□□ -1.98
SCN4AP35499 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC2.7□□□□□ -1.98
SCN4AP35499 AC083923.1-201ENST00000523708 376 ntBASIC2.7□□□□□ -1.98
SCN4AP35499 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.7□□□□□ -1.98
SCN4AP35499 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.7□□□□□ -1.98
SCN4AP35499 AC128687.1-201ENST00000605304 619 ntBASIC2.7□□□□□ -1.98
SCN4AP35499 AC008432.1-201ENST00000615912 1320 ntBASIC2.7□□□□□ -1.98
SCN4AP35499 AL118496.1-201ENST00000440201 1812 ntBASIC2.69□□□□□ -1.98
SCN4AP35499 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
SCN4AP35499 AC007256.1-201ENST00000392253 2765 ntBASIC2.69□□□□□ -1.98
SCN4AP35499 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
SCN4AP35499 AL591416.1-201ENST00000404015 867 ntBASIC2.69□□□□□ -1.98
SCN4AP35499 AC010385.1-201ENST00000412374 256 ntBASIC2.69□□□□□ -1.98
SCN4AP35499 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SCN4AP35499 AC234782.4-201ENST00000417646 1048 ntBASIC2.69□□□□□ -1.98
SCN4AP35499 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.69□□□□□ -1.98
SCN4AP35499 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.69□□□□□ -1.98
SCN4AP35499 MTCO2P17-201ENST00000424336 677 ntBASIC2.69□□□□□ -1.98
SCN4AP35499 AC009414.1-201ENST00000427200 443 ntBASIC2.69□□□□□ -1.98
SCN4AP35499 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.69□□□□□ -1.98
SCN4AP35499 RPL7P29-201ENST00000437151 728 ntBASIC2.69□□□□□ -1.98
SCN4AP35499 FABP5P3-201ENST00000437960 408 ntBASIC2.69□□□□□ -1.98
SCN4AP35499 AL691517.1-201ENST00000440833 1235 ntBASIC2.69□□□□□ -1.98
SCN4AP35499 HSPE1P28-201ENST00000443139 211 ntBASIC2.69□□□□□ -1.98
SCN4AP35499 AC124916.1-201ENST00000444020 547 ntBASIC2.69□□□□□ -1.98
SCN4AP35499 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SCN4AP35499 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC2.69□□□□□ -1.98
SCN4AP35499 AC087190.1-201ENST00000484462 480 ntBASIC2.69□□□□□ -1.98
SCN4AP35499 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC2.69□□□□□ -1.98
SCN4AP35499 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.69□□□□□ -1.98
SCN4AP35499 SCARNA17.1-201ENST00000516211 143 ntBASIC2.69□□□□□ -1.98
SCN4AP35499 SCARNA17.2-201ENST00000516334 143 ntBASIC2.69□□□□□ -1.98
SCN4AP35499 C1DP5-201ENST00000525775 383 ntBASIC2.69□□□□□ -1.98
SCN4AP35499 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC2.69□□□□□ -1.98
SCN4AP35499 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SCN4AP35499 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC2.69□□□□□ -1.98
SCN4AP35499 SCARNA17.4-201ENST00000614296 143 ntBASIC2.69□□□□□ -1.98
SCN4AP35499 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC2.69□□□□□ -1.98
SCN4AP35499 AL512283.1-201ENST00000606756 1384 ntBASIC2.69□□□□□ -1.98
SCN4AP35499 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.69□□□□□ -1.98
SCN4AP35499 AC097714.1-201ENST00000511272 1647 ntBASIC2.69□□□□□ -1.98
SCN4AP35499 Y_RNA.269-201ENST00000364685 89 ntBASIC2.68□□□□□ -1.98
SCN4AP35499 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
SCN4AP35499 RPL31P52-201ENST00000407532 367 ntBASIC2.68□□□□□ -1.98
SCN4AP35499 HMGN2P35-201ENST00000412164 270 ntBASIC2.68□□□□□ -1.98
SCN4AP35499 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.68□□□□□ -1.98
SCN4AP35499 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.68□□□□□ -1.98
SCN4AP35499 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC2.68□□□□□ -1.98
SCN4AP35499 AC109583.1-201ENST00000432156 268 ntBASIC2.68□□□□□ -1.98
SCN4AP35499 AL353718.1-201ENST00000451028 517 ntBASIC2.68□□□□□ -1.98
SCN4AP35499 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SCN4AP35499 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.68□□□□□ -1.98
SCN4AP35499 AC098799.2-201ENST00000509466 868 ntBASIC2.68□□□□□ -1.98
SCN4AP35499 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC2.68□□□□□ -1.98
SCN4AP35499 AC008562.1-201ENST00000521763 330 ntBASIC2.68□□□□□ -1.98
SCN4AP35499 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC2.68□□□□□ -1.98
SCN4AP35499 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
SCN4AP35499 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.68□□□□□ -1.98
SCN4AP35499 AP002906.1-201ENST00000603405 233 ntBASIC2.68□□□□□ -1.98
SCN4AP35499 AC016877.3-201ENST00000606778 504 ntBASIC2.68□□□□□ -1.98
SCN4AP35499 snoU13.31-201ENST00000607291 104 ntBASIC2.68□□□□□ -1.98
SCN4AP35499 AC103710.1-201ENST00000610003 901 ntBASIC2.68□□□□□ -1.98
SCN4AP35499 BX664608.1-201ENST00000610519 487 ntBASIC2.68□□□□□ -1.98
SCN4AP35499 uc_338.9-201ENST00000617424 182 ntBASIC2.68□□□□□ -1.98
SCN4AP35499 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SCN4AP35499 HSP90AA5P-201ENST00000438353 2192 ntBASIC2.68□□□□□ -1.98
SCN4AP35499 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SCN4AP35499 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SCN4AP35499 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
SCN4AP35499 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.68□□□□□ -1.98
SCN4AP35499 UBE2V1P11-201ENST00000411559 285 ntBASIC2.68□□□□□ -1.98
SCN4AP35499 TATDN1P1-201ENST00000414123 891 ntBASIC2.68□□□□□ -1.98
SCN4AP35499 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.68□□□□□ -1.98
SCN4AP35499 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
SCN4AP35499 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC2.68□□□□□ -1.98
SCN4AP35499 HMGB1P45-201ENST00000435986 653 ntBASIC2.68□□□□□ -1.98
SCN4AP35499 AC093392.2-201ENST00000450682 337 ntBASIC2.68□□□□□ -1.98
SCN4AP35499 GTF2IP12-201ENST00000456547 356 ntBASIC2.68□□□□□ -1.98
SCN4AP35499 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC2.68□□□□□ -1.98
SCN4AP35499 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC2.68□□□□□ -1.98
SCN4AP35499 AC008885.2-201ENST00000509506 930 ntBASIC2.68□□□□□ -1.98
SCN4AP35499 AC121161.1-201ENST00000510606 652 ntBASIC2.68□□□□□ -1.98
SCN4AP35499 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.68□□□□□ -1.98
SCN4AP35499 AC105137.2-201ENST00000569073 466 ntBASIC2.68□□□□□ -1.98
SCN4AP35499 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.68□□□□□ -1.98
SCN4AP35499 AC005776.1-201ENST00000603164 290 ntBASIC2.68□□□□□ -1.98
SCN4AP35499 ABI1P1-201ENST00000603375 1120 ntBASIC2.68□□□□□ -1.98
SCN4AP35499 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC2.68□□□□□ -1.98
SCN4AP35499 AC067747.1-201ENST00000608026 250 ntBASIC2.68□□□□□ -1.98
SCN4AP35499 AC021851.1-201ENST00000608537 1082 ntBASIC2.68□□□□□ -1.98
SCN4AP35499 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SCN4AP35499 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC2.68□□□□□ -1.98
SCN4AP35499 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
SCN4AP35499 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SCN4AP35499 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms