Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 RPL31P35-201ENST00000431058 377 ntBASIC4.84□□□□□ -1.63
CNGA1P29973 AL358934.1-201ENST00000432346 324 ntBASIC4.84□□□□□ -1.63
CNGA1P29973 OR2B8P-201ENST00000432841 938 ntBASIC4.84□□□□□ -1.63
CNGA1P29973 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC4.84□□□□□ -1.63
CNGA1P29973 MTND1P4-201ENST00000435196 415 ntBASIC4.84□□□□□ -1.63
CNGA1P29973 USP9YP15-201ENST00000442391 422 ntBASIC4.84□□□□□ -1.63
CNGA1P29973 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.84□□□□□ -1.63
CNGA1P29973 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.84□□□□□ -1.63
CNGA1P29973 HMGB3P30-201ENST00000457863 606 ntBASIC4.84□□□□□ -1.63
CNGA1P29973 AC135721.1-201ENST00000497954 479 ntBASIC4.84□□□□□ -1.63
CNGA1P29973 AC022483.1-201ENST00000514020 567 ntBASIC4.84□□□□□ -1.63
CNGA1P29973 AC026801.2-201ENST00000515352 425 ntBASIC4.84□□□□□ -1.63
CNGA1P29973 DEFB108D-201ENST00000527787 222 ntBASIC4.84□□□□□ -1.63
CNGA1P29973 DEFB108A-201ENST00000530110 222 ntBASIC4.84□□□□□ -1.63
CNGA1P29973 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC4.84□□□□□ -1.63
CNGA1P29973 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC4.84□□□□□ -1.63
CNGA1P29973 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.84□□□□□ -1.63
CNGA1P29973 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.84□□□□□ -1.63
CNGA1P29973 MIR3944-201ENST00000581277 108 ntBASIC4.84□□□□□ -1.63
CNGA1P29973 AC068790.5-201ENST00000602741 355 ntBASIC4.84□□□□□ -1.63
CNGA1P29973 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.84□□□□□ -1.63
CNGA1P29973 AC015967.1-201ENST00000619893 476 ntBASIC4.84□□□□□ -1.63
CNGA1P29973 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
CNGA1P29973 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CNGA1P29973 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
CNGA1P29973 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.64
CNGA1P29973 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.83□□□□□ -1.64
CNGA1P29973 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CNGA1P29973 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CNGA1P29973 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CNGA1P29973 SNORA71.3-201ENST00000362582 128 ntBASIC4.83□□□□□ -1.64
CNGA1P29973 SNORD46.1-201ENST00000364139 104 ntBASIC4.83□□□□□ -1.64
CNGA1P29973 RNU6-1074P-201ENST00000383995 104 ntBASIC4.83□□□□□ -1.64
CNGA1P29973 RNU6-432P-201ENST00000384196 109 ntBASIC4.83□□□□□ -1.64
CNGA1P29973 RNU6-882P-201ENST00000391025 103 ntBASIC4.83□□□□□ -1.64
CNGA1P29973 SNORA74C-2-201ENST00000411179 201 ntBASIC4.83□□□□□ -1.64
CNGA1P29973 AC127391.1-201ENST00000411737 98 ntBASIC4.83□□□□□ -1.64
CNGA1P29973 RPS15AP12-201ENST00000419498 388 ntBASIC4.83□□□□□ -1.64
CNGA1P29973 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CNGA1P29973 AC119618.1-201ENST00000434191 222 ntBASIC4.83□□□□□ -1.64
CNGA1P29973 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.83□□□□□ -1.64
CNGA1P29973 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC4.83□□□□□ -1.64
CNGA1P29973 AL136380.1-201ENST00000447970 162 ntBASIC4.83□□□□□ -1.64
CNGA1P29973 NPM1P49-201ENST00000448027 714 ntBASIC4.83□□□□□ -1.64
CNGA1P29973 AL645939.1-201ENST00000453429 797 ntBASIC4.83□□□□□ -1.64
CNGA1P29973 AL121877.1-201ENST00000453704 622 ntBASIC4.83□□□□□ -1.64
CNGA1P29973 MTCO3P20-201ENST00000454926 688 ntBASIC4.83□□□□□ -1.64
CNGA1P29973 AP000873.1-201ENST00000463987 400 ntBASIC4.83□□□□□ -1.64
CNGA1P29973 RPL9P6-201ENST00000492764 598 ntBASIC4.83□□□□□ -1.64
CNGA1P29973 AC078918.1-201ENST00000498515 228 ntBASIC4.83□□□□□ -1.64
CNGA1P29973 AL592156.1-201ENST00000508758 304 ntBASIC4.83□□□□□ -1.64
CNGA1P29973 AC021146.1-201ENST00000511202 716 ntBASIC4.83□□□□□ -1.64
CNGA1P29973 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.83□□□□□ -1.64
CNGA1P29973 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC4.83□□□□□ -1.64
CNGA1P29973 RNA5SP337-201ENST00000517007 109 ntBASIC4.83□□□□□ -1.64
CNGA1P29973 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.83□□□□□ -1.64
CNGA1P29973 AC090151.1-201ENST00000520784 730 ntBASIC4.83□□□□□ -1.64
CNGA1P29973 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.83□□□□□ -1.64
CNGA1P29973 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.83□□□□□ -1.64
CNGA1P29973 AC008739.3-201ENST00000603262 127 ntBASIC4.83□□□□□ -1.64
CNGA1P29973 AL160290.3-201ENST00000604869 165 ntBASIC4.83□□□□□ -1.64
CNGA1P29973 AC093838.1-201ENST00000613014 469 ntBASIC4.83□□□□□ -1.64
CNGA1P29973 AL133173.2-201ENST00000614270 90 ntBASIC4.83□□□□□ -1.64
CNGA1P29973 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.83□□□□□ -1.64
CNGA1P29973 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.83□□□□□ -1.64
CNGA1P29973 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CNGA1P29973 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CNGA1P29973 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CNGA1P29973 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CNGA1P29973 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CNGA1P29973 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
CNGA1P29973 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.82□□□□□ -1.64
CNGA1P29973 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CNGA1P29973 AC004925.1-201ENST00000624256 2706 ntBASIC4.82□□□□□ -1.64
CNGA1P29973 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CNGA1P29973 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CNGA1P29973 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CNGA1P29973 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CNGA1P29973 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CNGA1P29973 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
CNGA1P29973 RPL17P50-201ENST00000396131 546 ntBASIC4.82□□□□□ -1.64
CNGA1P29973 AL590704.1-201ENST00000402856 794 ntBASIC4.82□□□□□ -1.64
CNGA1P29973 GSTA9P-201ENST00000406231 611 ntBASIC4.82□□□□□ -1.64
CNGA1P29973 RPS3AP24-201ENST00000407896 734 ntBASIC4.82□□□□□ -1.64
CNGA1P29973 RN7SKP167-201ENST00000411047 285 ntBASIC4.82□□□□□ -1.64
CNGA1P29973 UBE2V1P10-201ENST00000414685 269 ntBASIC4.82□□□□□ -1.64
CNGA1P29973 MTCO3P30-201ENST00000426425 670 ntBASIC4.82□□□□□ -1.64
CNGA1P29973 AC018644.1-201ENST00000429934 551 ntBASIC4.82□□□□□ -1.64
CNGA1P29973 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC4.82□□□□□ -1.64
CNGA1P29973 AL445584.1-201ENST00000431451 330 ntBASIC4.82□□□□□ -1.64
CNGA1P29973 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.82□□□□□ -1.64
CNGA1P29973 AC093156.1-201ENST00000440382 670 ntBASIC4.82□□□□□ -1.64
CNGA1P29973 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC4.82□□□□□ -1.64
CNGA1P29973 AL121871.1-201ENST00000443413 436 ntBASIC4.82□□□□□ -1.64
CNGA1P29973 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.82□□□□□ -1.64
CNGA1P29973 AC093392.2-201ENST00000450682 337 ntBASIC4.82□□□□□ -1.64
CNGA1P29973 RPS24P6-201ENST00000452670 400 ntBASIC4.82□□□□□ -1.64
CNGA1P29973 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC4.82□□□□□ -1.64
CNGA1P29973 RPL23AP2-201ENST00000471227 466 ntBASIC4.82□□□□□ -1.64
CNGA1P29973 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms