Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
ABCD3P28288 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
ABCD3P28288 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.72□□□□□ -1.81
ABCD3P28288 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.81
ABCD3P28288 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
ABCD3P28288 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
ABCD3P28288 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
ABCD3P28288 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
ABCD3P28288 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.71□□□□□ -1.82
ABCD3P28288 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
ABCD3P28288 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
ABCD3P28288 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.71□□□□□ -1.82
ABCD3P28288 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.71□□□□□ -1.82
ABCD3P28288 MIR372-201ENST00000362225 67 ntBASIC3.71□□□□□ -1.82
ABCD3P28288 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
ABCD3P28288 SNORA36C-201ENST00000384289 132 ntBASIC3.71□□□□□ -1.82
ABCD3P28288 RNU4-6P-201ENST00000410804 122 ntBASIC3.71□□□□□ -1.82
ABCD3P28288 USP9YP13-201ENST00000417797 480 ntBASIC3.71□□□□□ -1.82
ABCD3P28288 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.71□□□□□ -1.82
ABCD3P28288 SEPT2P1-201ENST00000419651 180 ntBASIC3.71□□□□□ -1.82
ABCD3P28288 YPEL5P1-201ENST00000419731 367 ntBASIC3.71□□□□□ -1.82
ABCD3P28288 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.71□□□□□ -1.82
ABCD3P28288 AL691449.1-201ENST00000426570 421 ntBASIC3.71□□□□□ -1.82
ABCD3P28288 AC008850.1-201ENST00000427546 362 ntBASIC3.71□□□□□ -1.82
ABCD3P28288 RPL7L1P10-201ENST00000427790 463 ntBASIC3.71□□□□□ -1.82
ABCD3P28288 AL356867.1-201ENST00000429623 299 ntBASIC3.71□□□□□ -1.82
ABCD3P28288 AL117339.2-201ENST00000430475 180 ntBASIC3.71□□□□□ -1.82
ABCD3P28288 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.71□□□□□ -1.82
ABCD3P28288 GSTA7P-201ENST00000438425 448 ntBASIC3.71□□□□□ -1.82
ABCD3P28288 AC092641.1-201ENST00000440229 772 ntBASIC3.71□□□□□ -1.82
ABCD3P28288 MTCO3P45-201ENST00000443036 613 ntBASIC3.71□□□□□ -1.82
ABCD3P28288 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.71□□□□□ -1.82
ABCD3P28288 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.71□□□□□ -1.82
ABCD3P28288 ELOCP30-201ENST00000447108 299 ntBASIC3.71□□□□□ -1.82
ABCD3P28288 AC099563.1-201ENST00000456086 418 ntBASIC3.71□□□□□ -1.82
ABCD3P28288 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.71□□□□□ -1.82
ABCD3P28288 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.71□□□□□ -1.82
ABCD3P28288 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
ABCD3P28288 RPS15AP36-201ENST00000492022 382 ntBASIC3.71□□□□□ -1.82
ABCD3P28288 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.71□□□□□ -1.82
ABCD3P28288 FTH1P21-201ENST00000512179 511 ntBASIC3.71□□□□□ -1.82
ABCD3P28288 RN7SKP21-201ENST00000516503 220 ntBASIC3.71□□□□□ -1.82
ABCD3P28288 Y_RNA.695-201ENST00000516715 107 ntBASIC3.71□□□□□ -1.82
ABCD3P28288 IGKV2-38-201ENST00000517443 247 ntBASIC3.71□□□□□ -1.82
ABCD3P28288 PAICSP4-201ENST00000517543 1253 ntBASIC3.71□□□□□ -1.82
ABCD3P28288 AP002748.2-201ENST00000528671 348 ntBASIC3.71□□□□□ -1.82
ABCD3P28288 DEFB108A-201ENST00000530110 222 ntBASIC3.71□□□□□ -1.82
ABCD3P28288 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.71□□□□□ -1.82
ABCD3P28288 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.71□□□□□ -1.82
ABCD3P28288 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.71□□□□□ -1.82
ABCD3P28288 AC123904.2-201ENST00000548059 300 ntBASIC3.71□□□□□ -1.82
ABCD3P28288 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.71□□□□□ -1.82
ABCD3P28288 HSPE1P5-201ENST00000561489 272 ntBASIC3.71□□□□□ -1.82
ABCD3P28288 KC877982.1-201ENST00000602313 470 ntBASIC3.71□□□□□ -1.82
ABCD3P28288 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.71□□□□□ -1.82
ABCD3P28288 AP001981.2-201ENST00000603241 418 ntBASIC3.71□□□□□ -1.82
ABCD3P28288 AC013476.2-201ENST00000614456 459 ntBASIC3.71□□□□□ -1.82
ABCD3P28288 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.71□□□□□ -1.82
ABCD3P28288 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.71□□□□□ -1.82
ABCD3P28288 AC008568.2-201ENST00000623862 2313 ntBASIC3.71□□□□□ -1.82
ABCD3P28288 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.71□□□□□ -1.82
ABCD3P28288 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.7□□□□□ -1.82
ABCD3P28288 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
ABCD3P28288 RNA5SP295-201ENST00000362655 121 ntBASIC3.7□□□□□ -1.82
ABCD3P28288 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
ABCD3P28288 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
ABCD3P28288 TXNP7-201ENST00000406296 293 ntBASIC3.7□□□□□ -1.82
ABCD3P28288 MIR1251-201ENST00000408552 70 ntBASIC3.7□□□□□ -1.82
ABCD3P28288 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
ABCD3P28288 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.7□□□□□ -1.82
ABCD3P28288 AC006366.1-201ENST00000422002 759 ntBASIC3.7□□□□□ -1.82
ABCD3P28288 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.7□□□□□ -1.82
ABCD3P28288 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.7□□□□□ -1.82
ABCD3P28288 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.7□□□□□ -1.82
ABCD3P28288 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.7□□□□□ -1.82
ABCD3P28288 TIMM9P1-201ENST00000436122 256 ntBASIC3.7□□□□□ -1.82
ABCD3P28288 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.7□□□□□ -1.82
ABCD3P28288 RPL21P89-201ENST00000444021 467 ntBASIC3.7□□□□□ -1.82
ABCD3P28288 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.7□□□□□ -1.82
ABCD3P28288 HMGB3P22-202ENST00000451823 572 ntBASIC3.7□□□□□ -1.82
ABCD3P28288 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.7□□□□□ -1.82
ABCD3P28288 FABP3P2-201ENST00000453169 399 ntBASIC3.7□□□□□ -1.82
ABCD3P28288 AC073387.1-201ENST00000453261 709 ntBASIC3.7□□□□□ -1.82
ABCD3P28288 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.7□□□□□ -1.82
ABCD3P28288 DNAJC19P1-201ENST00000455312 319 ntBASIC3.7□□□□□ -1.82
ABCD3P28288 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC3.7□□□□□ -1.82
ABCD3P28288 PPIAP15-201ENST00000479662 484 ntBASIC3.7□□□□□ -1.82
ABCD3P28288 AC106872.2-201ENST00000494303 480 ntBASIC3.7□□□□□ -1.82
ABCD3P28288 AC080014.1-201ENST00000496877 1201 ntBASIC3.7□□□□□ -1.82
ABCD3P28288 CDC42P4-201ENST00000510507 563 ntBASIC3.7□□□□□ -1.82
ABCD3P28288 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.7□□□□□ -1.82
ABCD3P28288 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.7□□□□□ -1.82
ABCD3P28288 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.7□□□□□ -1.82
ABCD3P28288 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
ABCD3P28288 AC091516.1-201ENST00000549191 703 ntBASIC3.7□□□□□ -1.82
ABCD3P28288 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.7□□□□□ -1.82
ABCD3P28288 OR4H12P-201ENST00000556269 907 ntBASIC3.7□□□□□ -1.82
ABCD3P28288 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.7□□□□□ -1.82
ABCD3P28288 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.7□□□□□ -1.82
ABCD3P28288 AC022968.1-201ENST00000567372 442 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms