Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.86□□□□□ -1.47
RFX1P22670 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RFX1P22670 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC5.86□□□□□ -1.47
RFX1P22670 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.86□□□□□ -1.47
RFX1P22670 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
RFX1P22670 OR5D15P-201ENST00000531671 942 ntBASIC5.86□□□□□ -1.47
RFX1P22670 AC063950.1-201ENST00000552036 308 ntBASIC5.86□□□□□ -1.47
RFX1P22670 RN7SL290P-201ENST00000578661 300 ntBASIC5.86□□□□□ -1.47
RFX1P22670 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.86□□□□□ -1.47
RFX1P22670 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC5.86□□□□□ -1.47
RFX1P22670 AC244107.2-201ENST00000611773 76 ntBASIC5.86□□□□□ -1.47
RFX1P22670 AL355365.1-201ENST00000616480 294 ntBASIC5.86□□□□□ -1.47
RFX1P22670 AC022418.1-201ENST00000624118 445 ntBASIC5.86□□□□□ -1.47
RFX1P22670 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
RFX1P22670 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
RFX1P22670 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RFX1P22670 GVINP1-202ENST00000531871 7271 ntBASIC5.86□□□□□ -1.47
RFX1P22670 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RFX1P22670 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC5.86□□□□□ -1.47
RFX1P22670 HSPA8P4-201ENST00000511877 1920 ntBASIC5.86□□□□□ -1.47
RFX1P22670 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
RFX1P22670 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.85□□□□□ -1.47
RFX1P22670 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.85□□□□□ -1.47
RFX1P22670 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
RFX1P22670 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
RFX1P22670 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
RFX1P22670 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RFX1P22670 CISD1P1-201ENST00000393907 327 ntBASIC5.85□□□□□ -1.47
RFX1P22670 FABP7P2-201ENST00000429946 379 ntBASIC5.85□□□□□ -1.47
RFX1P22670 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC5.85□□□□□ -1.47
RFX1P22670 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC5.85□□□□□ -1.47
RFX1P22670 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC5.85□□□□□ -1.47
RFX1P22670 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.85□□□□□ -1.47
RFX1P22670 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.85□□□□□ -1.47
RFX1P22670 TDGF1P1-201ENST00000445734 527 ntBASIC5.85□□□□□ -1.47
RFX1P22670 FTH1P2-201ENST00000466086 412 ntBASIC5.85□□□□□ -1.47
RFX1P22670 RN7SL222P-201ENST00000476452 299 ntBASIC5.85□□□□□ -1.47
RFX1P22670 RPL31P60-201ENST00000478450 367 ntBASIC5.85□□□□□ -1.47
RFX1P22670 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC5.85□□□□□ -1.47
RFX1P22670 RN7SL447P-201ENST00000494711 245 ntBASIC5.85□□□□□ -1.47
RFX1P22670 AC108145.1-201ENST00000503770 153 ntBASIC5.85□□□□□ -1.47
RFX1P22670 MRPS33P2-201ENST00000507850 322 ntBASIC5.85□□□□□ -1.47
RFX1P22670 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RFX1P22670 RNU6-988P-201ENST00000519081 107 ntBASIC5.85□□□□□ -1.47
RFX1P22670 DYNLL1P4-201ENST00000549314 266 ntBASIC5.85□□□□□ -1.47
RFX1P22670 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.85□□□□□ -1.47
RFX1P22670 SNORD84-203ENST00000584275 78 ntBASIC5.85□□□□□ -1.47
RFX1P22670 XIAPP1-201ENST00000603162 600 ntBASIC5.85□□□□□ -1.47
RFX1P22670 AC020910.3-201ENST00000603701 874 ntBASIC5.85□□□□□ -1.47
RFX1P22670 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.85□□□□□ -1.47
RFX1P22670 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RFX1P22670 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC5.85□□□□□ -1.47
RFX1P22670 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.85□□□□□ -1.47
RFX1P22670 MTND5P19-201ENST00000424872 1794 ntBASIC5.85□□□□□ -1.47
RFX1P22670 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.85□□□□□ -1.47
RFX1P22670 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
RFX1P22670 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RFX1P22670 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.84□□□□□ -1.47
RFX1P22670 SCARNA15-201ENST00000607520 4325 ntBASIC5.84□□□□□ -1.47
RFX1P22670 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RFX1P22670 A2MP1-204ENST00000566278 4130 ntBASIC5.84□□□□□ -1.47
RFX1P22670 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RFX1P22670 AL356489.2-201ENST00000566968 3528 ntBASIC5.84□□□□□ -1.47
RFX1P22670 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RFX1P22670 AC009812.4-201ENST00000569134 1805 ntBASIC5.84□□□□□ -1.47
RFX1P22670 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RFX1P22670 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
RFX1P22670 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.84□□□□□ -1.47
RFX1P22670 U8.4-201ENST00000363626 134 ntBASIC5.84□□□□□ -1.47
RFX1P22670 AL590704.1-201ENST00000402856 794 ntBASIC5.84□□□□□ -1.47
RFX1P22670 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC5.84□□□□□ -1.47
RFX1P22670 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC5.84□□□□□ -1.47
RFX1P22670 MTATP6P4-201ENST00000427725 675 ntBASIC5.84□□□□□ -1.47
RFX1P22670 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RFX1P22670 RPL19P16-201ENST00000433839 588 ntBASIC5.84□□□□□ -1.47
RFX1P22670 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC5.84□□□□□ -1.47
RFX1P22670 AC006463.2-201ENST00000473326 348 ntBASIC5.84□□□□□ -1.47
RFX1P22670 RPL7P42-201ENST00000481005 679 ntBASIC5.84□□□□□ -1.47
RFX1P22670 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.84□□□□□ -1.47
RFX1P22670 RNU6-840P-201ENST00000517275 65 ntBASIC5.84□□□□□ -1.47
RFX1P22670 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.84□□□□□ -1.47
RFX1P22670 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.84□□□□□ -1.47
RFX1P22670 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC5.84□□□□□ -1.47
RFX1P22670 DNAJC8P1-201ENST00000554535 372 ntBASIC5.84□□□□□ -1.47
RFX1P22670 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC5.84□□□□□ -1.47
RFX1P22670 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.84□□□□□ -1.47
RFX1P22670 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC5.84□□□□□ -1.47
RFX1P22670 AP005403.1-201ENST00000579720 229 ntBASIC5.84□□□□□ -1.47
RFX1P22670 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.84□□□□□ -1.47
RFX1P22670 AP000654.2-201ENST00000605633 586 ntBASIC5.84□□□□□ -1.47
RFX1P22670 AL731566.2-201ENST00000618971 317 ntBASIC5.84□□□□□ -1.47
RFX1P22670 AC010378.1-201ENST00000619270 362 ntBASIC5.84□□□□□ -1.47
RFX1P22670 RMST_9.1-201ENST00000619945 193 ntBASIC5.84□□□□□ -1.47
RFX1P22670 AC006065.5-201ENST00000623427 349 ntBASIC5.84□□□□□ -1.47
RFX1P22670 MIR6715B-201ENST00000637172 77 ntBASIC5.84□□□□□ -1.47
RFX1P22670 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
RFX1P22670 OR9K1P-202ENST00000641111 3217 ntBASIC5.84□□□□□ -1.47
RFX1P22670 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC5.84□□□□□ -1.47
RFX1P22670 AL391684.1-202ENST00000641293 1636 ntBASIC5.84□□□□□ -1.47
RFX1P22670 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms