Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AP001148.1-201ENST00000624124 2359 ntBASIC2.29□□□□□ -2.04
COL5A1P20908 RNU5E-10P-201ENST00000363506 118 ntBASIC2.28□□□□□ -2.04
COL5A1P20908 MIR489-201ENST00000384923 84 ntBASIC2.28□□□□□ -2.04
COL5A1P20908 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
COL5A1P20908 HSPE1P26-201ENST00000405341 275 ntBASIC2.28□□□□□ -2.04
COL5A1P20908 GSTA9P-201ENST00000406231 611 ntBASIC2.28□□□□□ -2.04
COL5A1P20908 MTATP6P31-201ENST00000406985 692 ntBASIC2.28□□□□□ -2.04
COL5A1P20908 USP9YP21-201ENST00000420603 432 ntBASIC2.28□□□□□ -2.04
COL5A1P20908 AC241520.1-201ENST00000422654 1099 ntBASIC2.28□□□□□ -2.04
COL5A1P20908 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.28□□□□□ -2.04
COL5A1P20908 RPS7P2-201ENST00000435134 607 ntBASIC2.28□□□□□ -2.04
COL5A1P20908 MTCYBP31-201ENST00000438855 1122 ntBASIC2.28□□□□□ -2.04
COL5A1P20908 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC2.28□□□□□ -2.04
COL5A1P20908 AL157827.1-201ENST00000447622 132 ntBASIC2.28□□□□□ -2.04
COL5A1P20908 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.28□□□□□ -2.04
COL5A1P20908 AC008571.1-201ENST00000467232 300 ntBASIC2.28□□□□□ -2.04
COL5A1P20908 AC104982.1-201ENST00000478775 574 ntBASIC2.28□□□□□ -2.04
COL5A1P20908 AC012170.1-201ENST00000495139 359 ntBASIC2.28□□□□□ -2.04
COL5A1P20908 AC104090.1-201ENST00000506341 1171 ntBASIC2.28□□□□□ -2.04
COL5A1P20908 AC093752.1-206ENST00000511823 336 ntBASIC2.28□□□□□ -2.04
COL5A1P20908 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC2.28□□□□□ -2.04
COL5A1P20908 IGHVIII-38-1-201ENST00000521454 282 ntBASIC2.28□□□□□ -2.04
COL5A1P20908 CKS1BP7-201ENST00000522230 235 ntBASIC2.28□□□□□ -2.04
COL5A1P20908 AC104115.2-201ENST00000523026 687 ntBASIC2.28□□□□□ -2.04
COL5A1P20908 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.28□□□□□ -2.04
COL5A1P20908 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC2.28□□□□□ -2.04
COL5A1P20908 NOP56P3-201ENST00000549457 385 ntBASIC2.28□□□□□ -2.04
COL5A1P20908 OR4U1P-201ENST00000554958 912 ntBASIC2.28□□□□□ -2.04
COL5A1P20908 AC090695.1-201ENST00000561269 1222 ntBASIC2.28□□□□□ -2.04
COL5A1P20908 AC008507.2-201ENST00000588402 1176 ntBASIC2.28□□□□□ -2.04
COL5A1P20908 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC2.28□□□□□ -2.04
COL5A1P20908 AC069431.2-201ENST00000604149 1099 ntBASIC2.28□□□□□ -2.04
COL5A1P20908 AC021851.1-201ENST00000608537 1082 ntBASIC2.28□□□□□ -2.04
COL5A1P20908 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC2.28□□□□□ -2.04
COL5A1P20908 AC109809.1-201ENST00000619665 545 ntBASIC2.28□□□□□ -2.04
COL5A1P20908 AC093875.1-201ENST00000623688 504 ntBASIC2.28□□□□□ -2.04
COL5A1P20908 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
COL5A1P20908 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.28□□□□□ -2.04
COL5A1P20908 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC2.28□□□□□ -2.04
COL5A1P20908 RNU6-468P-201ENST00000384003 109 ntBASIC2.28□□□□□ -2.04
COL5A1P20908 RNU6-906P-201ENST00000384700 70 ntBASIC2.28□□□□□ -2.04
COL5A1P20908 RNU6-796P-201ENST00000391086 107 ntBASIC2.28□□□□□ -2.04
COL5A1P20908 TRAPPC2P5-201ENST00000426293 308 ntBASIC2.28□□□□□ -2.04
COL5A1P20908 AC013262.1-201ENST00000426710 252 ntBASIC2.28□□□□□ -2.04
COL5A1P20908 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC2.28□□□□□ -2.04
COL5A1P20908 AL096829.2-201ENST00000446582 742 ntBASIC2.28□□□□□ -2.04
COL5A1P20908 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC2.28□□□□□ -2.04
COL5A1P20908 AL031313.1-201ENST00000448435 256 ntBASIC2.28□□□□□ -2.04
COL5A1P20908 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC2.28□□□□□ -2.04
COL5A1P20908 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC2.28□□□□□ -2.04
COL5A1P20908 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.28□□□□□ -2.04
COL5A1P20908 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.28□□□□□ -2.04
COL5A1P20908 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.28□□□□□ -2.04
COL5A1P20908 AC084757.1-201ENST00000559987 490 ntBASIC2.28□□□□□ -2.04
COL5A1P20908 AC103710.2-201ENST00000609912 942 ntBASIC2.28□□□□□ -2.04
COL5A1P20908 AL136981.2-201ENST00000617319 734 ntBASIC2.28□□□□□ -2.04
COL5A1P20908 AC008993.2-201ENST00000631744 806 ntBASIC2.28□□□□□ -2.04
COL5A1P20908 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC2.28□□□□□ -2.04
COL5A1P20908 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.28□□□□□ -2.04
COL5A1P20908 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
COL5A1P20908 MTND5P6-201ENST00000422338 1798 ntBASIC2.27□□□□□ -2.05
COL5A1P20908 RNU6-792P-201ENST00000363490 107 ntBASIC2.27□□□□□ -2.05
COL5A1P20908 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC2.27□□□□□ -2.05
COL5A1P20908 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC2.27□□□□□ -2.05
COL5A1P20908 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.27□□□□□ -2.05
COL5A1P20908 TRAPPC13P1-201ENST00000435991 1062 ntBASIC2.27□□□□□ -2.05
COL5A1P20908 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.27□□□□□ -2.05
COL5A1P20908 AC069277.2-201ENST00000454211 432 ntBASIC2.27□□□□□ -2.05
COL5A1P20908 GTF2IP12-201ENST00000456547 356 ntBASIC2.27□□□□□ -2.05
COL5A1P20908 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC2.27□□□□□ -2.05
COL5A1P20908 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC2.27□□□□□ -2.05
COL5A1P20908 LINC00888-204ENST00000487386 421 ntBASIC2.27□□□□□ -2.05
COL5A1P20908 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.27□□□□□ -2.05
COL5A1P20908 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
COL5A1P20908 AC118942.1-201ENST00000529674 1035 ntBASIC2.27□□□□□ -2.05
COL5A1P20908 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC2.27□□□□□ -2.05
COL5A1P20908 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.27□□□□□ -2.05
COL5A1P20908 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC2.27□□□□□ -2.05
COL5A1P20908 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC2.27□□□□□ -2.05
COL5A1P20908 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC2.27□□□□□ -2.05
COL5A1P20908 AC027104.1-201ENST00000563702 681 ntBASIC2.27□□□□□ -2.05
COL5A1P20908 AC005951.1-201ENST00000576706 485 ntBASIC2.27□□□□□ -2.05
COL5A1P20908 AC079610.2-201ENST00000604818 690 ntBASIC2.27□□□□□ -2.05
COL5A1P20908 AC019131.2-201ENST00000609071 870 ntBASIC2.27□□□□□ -2.05
COL5A1P20908 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC2.27□□□□□ -2.05
COL5A1P20908 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.27□□□□□ -2.05
COL5A1P20908 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.27□□□□□ -2.05
COL5A1P20908 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
COL5A1P20908 AC097714.1-201ENST00000511272 1647 ntBASIC2.27□□□□□ -2.05
COL5A1P20908 AP001486.2-201ENST00000561652 5113 ntBASIC2.27□□□□□ -2.05
COL5A1P20908 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
COL5A1P20908 ZNF29P-201ENST00000225587 168 ntBASIC2.26□□□□□ -2.05
COL5A1P20908 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
COL5A1P20908 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC2.26□□□□□ -2.05
COL5A1P20908 RNU6-532P-201ENST00000384318 107 ntBASIC2.26□□□□□ -2.05
COL5A1P20908 RNU6-31P-201ENST00000384388 108 ntBASIC2.26□□□□□ -2.05
COL5A1P20908 RNU6-1005P-201ENST00000384519 107 ntBASIC2.26□□□□□ -2.05
COL5A1P20908 SNORA64-201ENST00000384674 134 ntBASIC2.26□□□□□ -2.05
COL5A1P20908 MIR7-2-201ENST00000384970 110 ntBASIC2.26□□□□□ -2.05
COL5A1P20908 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms