Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 MTATP6P14-201ENST00000455189 673 ntBASIC3.32□□□□□ -1.88
HLA-DPA1P20036 AC010099.1-201ENST00000455434 375 ntBASIC3.32□□□□□ -1.88
HLA-DPA1P20036 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.32□□□□□ -1.88
HLA-DPA1P20036 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HLA-DPA1P20036 HSPE1P6-201ENST00000479457 291 ntBASIC3.32□□□□□ -1.88
HLA-DPA1P20036 RPS4XP22-201ENST00000480755 780 ntBASIC3.32□□□□□ -1.88
HLA-DPA1P20036 RPL30P5-201ENST00000494923 336 ntBASIC3.32□□□□□ -1.88
HLA-DPA1P20036 AC147055.4-201ENST00000504399 745 ntBASIC3.32□□□□□ -1.88
HLA-DPA1P20036 AC074250.1-201ENST00000511117 192 ntBASIC3.32□□□□□ -1.88
HLA-DPA1P20036 AC026801.2-201ENST00000515352 425 ntBASIC3.32□□□□□ -1.88
HLA-DPA1P20036 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.32□□□□□ -1.88
HLA-DPA1P20036 SNORA31.22-201ENST00000517204 135 ntBASIC3.32□□□□□ -1.88
HLA-DPA1P20036 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.32□□□□□ -1.88
HLA-DPA1P20036 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.32□□□□□ -1.88
HLA-DPA1P20036 OR7K1P-201ENST00000546439 926 ntBASIC3.32□□□□□ -1.88
HLA-DPA1P20036 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.32□□□□□ -1.88
HLA-DPA1P20036 AL158211.4-201ENST00000606988 584 ntBASIC3.32□□□□□ -1.88
HLA-DPA1P20036 AC004067.1-201ENST00000608733 700 ntBASIC3.32□□□□□ -1.88
HLA-DPA1P20036 AL157817.1-201ENST00000614264 790 ntBASIC3.32□□□□□ -1.88
HLA-DPA1P20036 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.32□□□□□ -1.88
HLA-DPA1P20036 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.32□□□□□ -1.88
HLA-DPA1P20036 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HLA-DPA1P20036 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.32□□□□□ -1.88
HLA-DPA1P20036 TPTE2P4-201ENST00000258589 1605 ntBASIC3.32□□□□□ -1.88
HLA-DPA1P20036 AC087359.1-201ENST00000508335 1740 ntBASIC3.32□□□□□ -1.88
HLA-DPA1P20036 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.31□□□□□ -1.88
HLA-DPA1P20036 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DPA1P20036 MTND4P9-201ENST00000507819 1346 ntBASIC3.31□□□□□ -1.88
HLA-DPA1P20036 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DPA1P20036 RNU6-343P-201ENST00000364709 104 ntBASIC3.31□□□□□ -1.88
HLA-DPA1P20036 Y_RNA.548-201ENST00000384656 105 ntBASIC3.31□□□□□ -1.88
HLA-DPA1P20036 RNVU1-14-201ENST00000384770 164 ntBASIC3.31□□□□□ -1.88
HLA-DPA1P20036 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
HLA-DPA1P20036 RNU6-1176P-201ENST00000390955 107 ntBASIC3.31□□□□□ -1.88
HLA-DPA1P20036 AL136310.1-201ENST00000404926 654 ntBASIC3.31□□□□□ -1.88
HLA-DPA1P20036 RNA5SP229-201ENST00000410809 99 ntBASIC3.31□□□□□ -1.88
HLA-DPA1P20036 BX323014.1-201ENST00000412876 237 ntBASIC3.31□□□□□ -1.88
HLA-DPA1P20036 USP9YP11-201ENST00000427537 717 ntBASIC3.31□□□□□ -1.88
HLA-DPA1P20036 AC006946.1-201ENST00000429106 328 ntBASIC3.31□□□□□ -1.88
HLA-DPA1P20036 AL356867.1-201ENST00000429623 299 ntBASIC3.31□□□□□ -1.88
HLA-DPA1P20036 OR4K11P-201ENST00000431829 904 ntBASIC3.31□□□□□ -1.88
HLA-DPA1P20036 ISCA1P2-201ENST00000438679 421 ntBASIC3.31□□□□□ -1.88
HLA-DPA1P20036 EEF1A1P39-201ENST00000440791 250 ntBASIC3.31□□□□□ -1.88
HLA-DPA1P20036 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.31□□□□□ -1.88
HLA-DPA1P20036 AC002381.1-201ENST00000447049 280 ntBASIC3.31□□□□□ -1.88
HLA-DPA1P20036 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.31□□□□□ -1.88
HLA-DPA1P20036 snoU109.3-201ENST00000459477 145 ntBASIC3.31□□□□□ -1.88
HLA-DPA1P20036 AC008155.2-201ENST00000464337 397 ntBASIC3.31□□□□□ -1.88
HLA-DPA1P20036 MTND1P16-201ENST00000465177 898 ntBASIC3.31□□□□□ -1.88
HLA-DPA1P20036 RPL23AP14-201ENST00000468281 468 ntBASIC3.31□□□□□ -1.88
HLA-DPA1P20036 RN7SL601P-201ENST00000471221 293 ntBASIC3.31□□□□□ -1.88
HLA-DPA1P20036 AP002884.2-201ENST00000471647 395 ntBASIC3.31□□□□□ -1.88
HLA-DPA1P20036 SETP11-201ENST00000473027 690 ntBASIC3.31□□□□□ -1.88
HLA-DPA1P20036 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.31□□□□□ -1.88
HLA-DPA1P20036 GMPSP1-201ENST00000514075 579 ntBASIC3.31□□□□□ -1.88
HLA-DPA1P20036 RNU6-150P-201ENST00000516237 95 ntBASIC3.31□□□□□ -1.88
HLA-DPA1P20036 RNU6-714P-201ENST00000516963 103 ntBASIC3.31□□□□□ -1.88
HLA-DPA1P20036 DEFB131D-201ENST00000526803 184 ntBASIC3.31□□□□□ -1.88
HLA-DPA1P20036 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DPA1P20036 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.31□□□□□ -1.88
HLA-DPA1P20036 OR6C7P-201ENST00000547875 934 ntBASIC3.31□□□□□ -1.88
HLA-DPA1P20036 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC3.31□□□□□ -1.88
HLA-DPA1P20036 MTCYBP23-201ENST00000558717 1102 ntBASIC3.31□□□□□ -1.88
HLA-DPA1P20036 AC090695.1-201ENST00000561269 1222 ntBASIC3.31□□□□□ -1.88
HLA-DPA1P20036 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.31□□□□□ -1.88
HLA-DPA1P20036 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.31□□□□□ -1.88
HLA-DPA1P20036 OR4K7P-201ENST00000580232 945 ntBASIC3.31□□□□□ -1.88
HLA-DPA1P20036 DUXAP3-201ENST00000603616 594 ntBASIC3.31□□□□□ -1.88
HLA-DPA1P20036 MIR7153-201ENST00000637758 57 ntBASIC3.31□□□□□ -1.88
HLA-DPA1P20036 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DPA1P20036 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DPA1P20036 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.3□□□□□ -1.88
HLA-DPA1P20036 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.3□□□□□ -1.88
HLA-DPA1P20036 MTND5P1-201ENST00000445440 1375 ntBASIC3.3□□□□□ -1.88
HLA-DPA1P20036 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HLA-DPA1P20036 MIR620-201ENST00000385232 95 ntBASIC3.3□□□□□ -1.88
HLA-DPA1P20036 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
HLA-DPA1P20036 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
HLA-DPA1P20036 RNA5SP107-201ENST00000411358 122 ntBASIC3.3□□□□□ -1.88
HLA-DPA1P20036 VN1R51P-201ENST00000411675 945 ntBASIC3.3□□□□□ -1.88
HLA-DPA1P20036 HMGN1P24-201ENST00000412282 298 ntBASIC3.3□□□□□ -1.88
HLA-DPA1P20036 MTATP6P20-201ENST00000414147 562 ntBASIC3.3□□□□□ -1.88
HLA-DPA1P20036 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.3□□□□□ -1.88
HLA-DPA1P20036 RPS3AP37-201ENST00000419176 745 ntBASIC3.3□□□□□ -1.88
HLA-DPA1P20036 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC3.3□□□□□ -1.88
HLA-DPA1P20036 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.3□□□□□ -1.88
HLA-DPA1P20036 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.3□□□□□ -1.88
HLA-DPA1P20036 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.3□□□□□ -1.88
HLA-DPA1P20036 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.3□□□□□ -1.88
HLA-DPA1P20036 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.3□□□□□ -1.88
HLA-DPA1P20036 RNU6-1231P-201ENST00000517185 103 ntBASIC3.3□□□□□ -1.88
HLA-DPA1P20036 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.3□□□□□ -1.88
HLA-DPA1P20036 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.3□□□□□ -1.88
HLA-DPA1P20036 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.3□□□□□ -1.88
HLA-DPA1P20036 UBE2NP1-201ENST00000545592 458 ntBASIC3.3□□□□□ -1.88
HLA-DPA1P20036 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.3□□□□□ -1.88
HLA-DPA1P20036 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.3□□□□□ -1.88
HLA-DPA1P20036 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC3.3□□□□□ -1.88
HLA-DPA1P20036 AC005014.3-201ENST00000605985 190 ntBASIC3.3□□□□□ -1.88
HLA-DPA1P20036 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms