Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC5.03□□□□□ -1.6
ITGA4P13612 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.03□□□□□ -1.6
ITGA4P13612 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC5.03□□□□□ -1.6
ITGA4P13612 Y_RNA.665-201ENST00000516177 98 ntBASIC5.03□□□□□ -1.6
ITGA4P13612 Y_RNA.691-201ENST00000516611 103 ntBASIC5.03□□□□□ -1.6
ITGA4P13612 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC5.03□□□□□ -1.6
ITGA4P13612 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.03□□□□□ -1.6
ITGA4P13612 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.03□□□□□ -1.6
ITGA4P13612 MIR4775-201ENST00000581168 75 ntBASIC5.03□□□□□ -1.6
ITGA4P13612 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.03□□□□□ -1.6
ITGA4P13612 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC5.03□□□□□ -1.6
ITGA4P13612 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.03□□□□□ -1.6
ITGA4P13612 AC090948.1-201ENST00000607464 549 ntBASIC5.03□□□□□ -1.6
ITGA4P13612 AC083809.1-201ENST00000615051 472 ntBASIC5.03□□□□□ -1.6
ITGA4P13612 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC5.03□□□□□ -1.6
ITGA4P13612 AP005019.3-201ENST00000620418 560 ntBASIC5.03□□□□□ -1.6
ITGA4P13612 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC5.03□□□□□ -1.6
ITGA4P13612 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
ITGA4P13612 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.03□□□□□ -1.6
ITGA4P13612 AL359893.1-201ENST00000447628 1580 ntBASIC5.03□□□□□ -1.6
ITGA4P13612 LARP1BP1-201ENST00000506036 1359 ntBASIC5.03□□□□□ -1.6
ITGA4P13612 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
ITGA4P13612 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
ITGA4P13612 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
ITGA4P13612 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
ITGA4P13612 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.02□□□□□ -1.61
ITGA4P13612 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.02□□□□□ -1.61
ITGA4P13612 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
ITGA4P13612 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
ITGA4P13612 IQCB2P-201ENST00000401788 1633 ntBASIC5.02□□□□□ -1.61
ITGA4P13612 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.02□□□□□ -1.61
ITGA4P13612 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
ITGA4P13612 AC021146.4-201ENST00000309229 279 ntBASIC5.02□□□□□ -1.61
ITGA4P13612 RNU6-38P-201ENST00000384085 107 ntBASIC5.02□□□□□ -1.61
ITGA4P13612 RNU6-831P-201ENST00000384548 107 ntBASIC5.02□□□□□ -1.61
ITGA4P13612 AL356967.1-201ENST00000406305 431 ntBASIC5.02□□□□□ -1.61
ITGA4P13612 AL606923.1-201ENST00000406616 190 ntBASIC5.02□□□□□ -1.61
ITGA4P13612 RPL30P3-201ENST00000424262 333 ntBASIC5.02□□□□□ -1.61
ITGA4P13612 AL732292.1-201ENST00000426692 226 ntBASIC5.02□□□□□ -1.61
ITGA4P13612 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC5.02□□□□□ -1.61
ITGA4P13612 MTND4P19-201ENST00000446659 478 ntBASIC5.02□□□□□ -1.61
ITGA4P13612 RNU6-333P-201ENST00000459117 107 ntBASIC5.02□□□□□ -1.61
ITGA4P13612 SCARNA10-201ENST00000459255 330 ntBASIC5.02□□□□□ -1.61
ITGA4P13612 DEFB109F-201ENST00000491870 277 ntBASIC5.02□□□□□ -1.61
ITGA4P13612 AP005597.4-201ENST00000526762 229 ntBASIC5.02□□□□□ -1.61
ITGA4P13612 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.02□□□□□ -1.61
ITGA4P13612 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC5.02□□□□□ -1.61
ITGA4P13612 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC5.02□□□□□ -1.61
ITGA4P13612 AC006329.2-201ENST00000611491 394 ntBASIC5.02□□□□□ -1.61
ITGA4P13612 AL603758.1-201ENST00000618654 241 ntBASIC5.02□□□□□ -1.61
ITGA4P13612 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.02□□□□□ -1.61
ITGA4P13612 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
ITGA4P13612 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC5.02□□□□□ -1.61
ITGA4P13612 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.02□□□□□ -1.61
ITGA4P13612 RAD17P1-201ENST00000418130 2042 ntBASIC5.02□□□□□ -1.61
ITGA4P13612 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
ITGA4P13612 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
ITGA4P13612 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
ITGA4P13612 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
ITGA4P13612 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
ITGA4P13612 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.01□□□□□ -1.61
ITGA4P13612 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
ITGA4P13612 AP001273.1-201ENST00000624493 3152 ntBASIC5.01□□□□□ -1.61
ITGA4P13612 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
ITGA4P13612 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
ITGA4P13612 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
ITGA4P13612 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
ITGA4P13612 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.01□□□□□ -1.61
ITGA4P13612 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.01□□□□□ -1.61
ITGA4P13612 Y_RNA.100-201ENST00000363141 102 ntBASIC5.01□□□□□ -1.61
ITGA4P13612 RNU6-1029P-201ENST00000384109 107 ntBASIC5.01□□□□□ -1.61
ITGA4P13612 AL583835.1-201ENST00000399570 407 ntBASIC5.01□□□□□ -1.61
ITGA4P13612 AL136372.1-201ENST00000403060 228 ntBASIC5.01□□□□□ -1.61
ITGA4P13612 AL080315.1-201ENST00000406055 466 ntBASIC5.01□□□□□ -1.61
ITGA4P13612 RNU2-36P-201ENST00000410361 191 ntBASIC5.01□□□□□ -1.61
ITGA4P13612 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC5.01□□□□□ -1.61
ITGA4P13612 GNG5P5-201ENST00000420444 220 ntBASIC5.01□□□□□ -1.61
ITGA4P13612 AL451054.2-201ENST00000420896 202 ntBASIC5.01□□□□□ -1.61
ITGA4P13612 HSPE1P1-201ENST00000421494 318 ntBASIC5.01□□□□□ -1.61
ITGA4P13612 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.01□□□□□ -1.61
ITGA4P13612 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC5.01□□□□□ -1.61
ITGA4P13612 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
ITGA4P13612 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC5.01□□□□□ -1.61
ITGA4P13612 MTND1P18-201ENST00000448191 573 ntBASIC5.01□□□□□ -1.61
ITGA4P13612 EIF4A1P11-201ENST00000451239 222 ntBASIC5.01□□□□□ -1.61
ITGA4P13612 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.01□□□□□ -1.61
ITGA4P13612 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC5.01□□□□□ -1.61
ITGA4P13612 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC5.01□□□□□ -1.61
ITGA4P13612 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC5.01□□□□□ -1.61
ITGA4P13612 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC5.01□□□□□ -1.61
ITGA4P13612 AC093840.1-201ENST00000511599 336 ntBASIC5.01□□□□□ -1.61
ITGA4P13612 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC5.01□□□□□ -1.61
ITGA4P13612 RN7SKP116-201ENST00000516902 319 ntBASIC5.01□□□□□ -1.61
ITGA4P13612 RNU6-64P-201ENST00000517119 105 ntBASIC5.01□□□□□ -1.61
ITGA4P13612 RN7SKP256-201ENST00000517201 314 ntBASIC5.01□□□□□ -1.61
ITGA4P13612 RPL7P20-201ENST00000520308 745 ntBASIC5.01□□□□□ -1.61
ITGA4P13612 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC5.01□□□□□ -1.61
ITGA4P13612 FAM60DP-201ENST00000524174 632 ntBASIC5.01□□□□□ -1.61
ITGA4P13612 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
ITGA4P13612 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms