Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 IGKV2D-36-201ENST00000518643 226 ntBASIC3.95□□□□□ -1.78
MMP3P08254 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.95□□□□□ -1.78
MMP3P08254 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.95□□□□□ -1.78
MMP3P08254 COX6CP8-201ENST00000522620 226 ntBASIC3.95□□□□□ -1.78
MMP3P08254 OR5AP1P-201ENST00000529730 940 ntBASIC3.95□□□□□ -1.78
MMP3P08254 AC007424.1-203ENST00000554613 687 ntBASIC3.95□□□□□ -1.78
MMP3P08254 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.95□□□□□ -1.78
MMP3P08254 MIR5697-201ENST00000578045 78 ntBASIC3.95□□□□□ -1.78
MMP3P08254 AP001180.3-201ENST00000582221 145 ntBASIC3.95□□□□□ -1.78
MMP3P08254 OR4G1P-201ENST00000588632 938 ntBASIC3.95□□□□□ -1.78
MMP3P08254 BRDTP1-201ENST00000605735 677 ntBASIC3.95□□□□□ -1.78
MMP3P08254 AC004492.1-201ENST00000607036 742 ntBASIC3.95□□□□□ -1.78
MMP3P08254 AC098614.4-201ENST00000607601 462 ntBASIC3.95□□□□□ -1.78
MMP3P08254 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.95□□□□□ -1.78
MMP3P08254 AL357080.1-201ENST00000617394 239 ntBASIC3.95□□□□□ -1.78
MMP3P08254 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.95□□□□□ -1.78
MMP3P08254 AC073968.1-201ENST00000618594 637 ntBASIC3.95□□□□□ -1.78
MMP3P08254 AL590240.3-201ENST00000621416 943 ntBASIC3.95□□□□□ -1.78
MMP3P08254 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.95□□□□□ -1.78
MMP3P08254 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.95□□□□□ -1.78
MMP3P08254 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
MMP3P08254 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
MMP3P08254 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
MMP3P08254 AL133383.2-201ENST00000622958 2336 ntBASIC3.94□□□□□ -1.78
MMP3P08254 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
MMP3P08254 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.94□□□□□ -1.78
MMP3P08254 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.94□□□□□ -1.78
MMP3P08254 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
MMP3P08254 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
MMP3P08254 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.94□□□□□ -1.78
MMP3P08254 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.94□□□□□ -1.78
MMP3P08254 FRG1CP-201ENST00000358464 769 ntBASIC3.94□□□□□ -1.78
MMP3P08254 SNORD74.4-201ENST00000364129 80 ntBASIC3.94□□□□□ -1.78
MMP3P08254 RNU6-348P-201ENST00000384386 107 ntBASIC3.94□□□□□ -1.78
MMP3P08254 MIR93-201ENST00000385024 80 ntBASIC3.94□□□□□ -1.78
MMP3P08254 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
MMP3P08254 RNU2-16P-201ENST00000410712 136 ntBASIC3.94□□□□□ -1.78
MMP3P08254 Y_RNA.619-201ENST00000410951 90 ntBASIC3.94□□□□□ -1.78
MMP3P08254 RN7SKP53-201ENST00000411337 315 ntBASIC3.94□□□□□ -1.78
MMP3P08254 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.94□□□□□ -1.78
MMP3P08254 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.94□□□□□ -1.78
MMP3P08254 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.94□□□□□ -1.78
MMP3P08254 RPL31P45-201ENST00000419532 356 ntBASIC3.94□□□□□ -1.78
MMP3P08254 AL356583.2-201ENST00000426536 280 ntBASIC3.94□□□□□ -1.78
MMP3P08254 PSMA6P3-201ENST00000428242 164 ntBASIC3.94□□□□□ -1.78
MMP3P08254 AC008065.1-201ENST00000428525 348 ntBASIC3.94□□□□□ -1.78
MMP3P08254 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.94□□□□□ -1.78
MMP3P08254 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.94□□□□□ -1.78
MMP3P08254 MTCYBP45-201ENST00000435243 565 ntBASIC3.94□□□□□ -1.78
MMP3P08254 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.94□□□□□ -1.78
MMP3P08254 RPL37P21-201ENST00000435890 276 ntBASIC3.94□□□□□ -1.78
MMP3P08254 AL031667.1-201ENST00000440222 725 ntBASIC3.94□□□□□ -1.78
MMP3P08254 RN7SL807P-201ENST00000470923 297 ntBASIC3.94□□□□□ -1.78
MMP3P08254 AC106872.3-201ENST00000495104 446 ntBASIC3.94□□□□□ -1.78
MMP3P08254 AC021678.1-201ENST00000505195 936 ntBASIC3.94□□□□□ -1.78
MMP3P08254 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.94□□□□□ -1.78
MMP3P08254 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.94□□□□□ -1.78
MMP3P08254 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.94□□□□□ -1.78
MMP3P08254 MTCO3P44-201ENST00000510977 541 ntBASIC3.94□□□□□ -1.78
MMP3P08254 AC024589.1-201ENST00000512207 263 ntBASIC3.94□□□□□ -1.78
MMP3P08254 IGLVIV-53-201ENST00000520107 367 ntBASIC3.94□□□□□ -1.78
MMP3P08254 MTND4LP18-201ENST00000526864 291 ntBASIC3.94□□□□□ -1.78
MMP3P08254 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.94□□□□□ -1.78
MMP3P08254 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.94□□□□□ -1.78
MMP3P08254 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.94□□□□□ -1.78
MMP3P08254 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.94□□□□□ -1.78
MMP3P08254 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.94□□□□□ -1.78
MMP3P08254 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.94□□□□□ -1.78
MMP3P08254 AC106782.4-201ENST00000568264 210 ntBASIC3.94□□□□□ -1.78
MMP3P08254 MIR4307-201ENST00000582802 84 ntBASIC3.94□□□□□ -1.78
MMP3P08254 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.94□□□□□ -1.78
MMP3P08254 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.94□□□□□ -1.78
MMP3P08254 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.94□□□□□ -1.78
MMP3P08254 AC068790.5-201ENST00000602741 355 ntBASIC3.94□□□□□ -1.78
MMP3P08254 SEPT7P9-203ENST00000604116 343 ntBASIC3.94□□□□□ -1.78
MMP3P08254 AL513477.2-201ENST00000607858 568 ntBASIC3.94□□□□□ -1.78
MMP3P08254 AC006566.1-201ENST00000608943 513 ntBASIC3.94□□□□□ -1.78
MMP3P08254 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.94□□□□□ -1.78
MMP3P08254 AC233309.1-201ENST00000619522 751 ntBASIC3.94□□□□□ -1.78
MMP3P08254 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.94□□□□□ -1.78
MMP3P08254 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.94□□□□□ -1.78
MMP3P08254 CRYM-AS1-204ENST00000637983 556 ntBASIC3.94□□□□□ -1.78
MMP3P08254 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
MMP3P08254 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
MMP3P08254 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.94□□□□□ -1.78
MMP3P08254 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
MMP3P08254 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
MMP3P08254 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.94□□□□□ -1.78
MMP3P08254 TEX21P-201ENST00000447107 1476 ntBASIC3.93□□□□□ -1.78
MMP3P08254 AC095050.2-201ENST00000510748 1458 ntBASIC3.93□□□□□ -1.78
MMP3P08254 AC006378.2-201ENST00000623178 2476 ntBASIC3.93□□□□□ -1.78
MMP3P08254 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
MMP3P08254 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
MMP3P08254 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
MMP3P08254 RNU6-769P-201ENST00000384407 104 ntBASIC3.93□□□□□ -1.78
MMP3P08254 RNU6-192P-201ENST00000391253 100 ntBASIC3.93□□□□□ -1.78
MMP3P08254 Y_RNA.599-201ENST00000410489 109 ntBASIC3.93□□□□□ -1.78
MMP3P08254 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.93□□□□□ -1.78
MMP3P08254 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.93□□□□□ -1.78
MMP3P08254 OR1AA1P-201ENST00000419597 916 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 135.7 ms